RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 KCNA6P17658 529 aa19.07■□□□□ 0.64
TMEM254-213ENST00000613758 EVC2Q86UK5 1308 aa19.07■□□□□ 0.64
TMEM254-213ENST00000613758 PTCH1Q13635 1447 aa19.04■□□□□ 0.64
TMEM254-213ENST00000613758 STRCQ7RTU9 1775 aa19.04■□□□□ 0.64
TMEM254-213ENST00000613758 CHD2O14647 1828 aaKnown RBP19.04■□□□□ 0.64
TMEM254-213ENST00000613758 XRN1Q8IZH2 1706 aaKnown RBP19.04■□□□□ 0.64
TMEM254-213ENST00000613758 PUS7Q96PZ0 661 aaKnown RBP19.02■□□□□ 0.63
TMEM254-213ENST00000613758 TULP4Q9NRJ4 1543 aa19.02■□□□□ 0.63
TMEM254-213ENST00000613758 CDK19Q9BWU1 502 aa19■□□□□ 0.63
TMEM254-213ENST00000613758 CABP2Q9NPB3 220 aa19■□□□□ 0.63
TMEM254-213ENST00000613758 SRPK2P78362 688 aaKnown RBP19■□□□□ 0.63
TMEM254-213ENST00000613758 WASLO00401 505 aaPredicted RBP18.98■□□□□ 0.63
TMEM254-213ENST00000613758 DMRT2Q9Y5R5 561 aa18.98■□□□□ 0.63
TMEM254-213ENST00000613758 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.97■□□□□ 0.63
TMEM254-213ENST00000613758 NWD1Q149M9 1564 aa18.96■□□□□ 0.63
TMEM254-213ENST00000613758 PROSER2Q86WR7 435 aaPredicted RBP18.95■□□□□ 0.62
TMEM254-213ENST00000613758 PANK3Q9H999 370 aa18.95■□□□□ 0.62
TMEM254-213ENST00000613758 TMC1Q8TDI8 760 aa18.95■□□□□ 0.62
TMEM254-213ENST00000613758 RBM33Q96EV2 1170 aaKnown RBP18.94■□□□□ 0.62
TMEM254-213ENST00000613758 SLC12A5Q9H2X9 1139 aa18.93■□□□□ 0.62
TMEM254-213ENST00000613758 ATAD2Q6PL18 1390 aa18.93■□□□□ 0.62
TMEM254-213ENST00000613758 ADGRB2O60241 1585 aa18.93■□□□□ 0.62
TMEM254-213ENST00000613758 AEBP2Q6ZN18 517 aaPredicted RBP18.92■□□□□ 0.62
TMEM254-213ENST00000613758 NKTRP30414 1462 aaKnown RBP18.92■□□□□ 0.62
TMEM254-213ENST00000613758 MYOM1P52179 1685 aa18.91■□□□□ 0.62
TMEM254-213ENST00000613758 NUDT16Q96DE0 195 aaKnown RBP18.9■□□□□ 0.62
TMEM254-213ENST00000613758 PER1O15534 1290 aaPredicted RBP18.89■□□□□ 0.62
TMEM254-213ENST00000613758 C14orf37Q86TY3 774 aa18.89■□□□□ 0.62
TMEM254-213ENST00000613758 ANP32CO43423 234 aa18.89■□□□□ 0.61
TMEM254-213ENST00000613758 ZNF335Q9H4Z2 1342 aaPredicted RBP18.89■□□□□ 0.61
TMEM254-213ENST00000613758 STRCP1A6NGW2 1772 aa18.89■□□□□ 0.61
TMEM254-213ENST00000613758 NINLQ9Y2I6 1382 aa18.88■□□□□ 0.61
TMEM254-213ENST00000613758 CABP1Q9NZU7 370 aa18.88■□□□□ 0.61
TMEM254-213ENST00000613758 ADGRL3Q9HAR2 1447 aa18.87■□□□□ 0.61
TMEM254-213ENST00000613758 NUTM2FA1L443 756 aa18.87■□□□□ 0.61
TMEM254-213ENST00000613758 CCDC61Q9Y6R9 512 aa18.87■□□□□ 0.61
TMEM254-213ENST00000613758 PRR36Q9H6K5 1346 aa18.87■□□□□ 0.61
TMEM254-213ENST00000613758 TMEM94Q12767 1356 aa18.86■□□□□ 0.61
TMEM254-213ENST00000613758 CARD14Q9BXL6 1004 aa18.85■□□□□ 0.61
TMEM254-213ENST00000613758 KNSTRNQ9Y448 316 aa18.85■□□□□ 0.61
TMEM254-213ENST00000613758 NALCNQ8IZF0 1738 aa18.85■□□□□ 0.61
TMEM254-213ENST00000613758 TERF2IPQ9NYB0 399 aa18.84■□□□□ 0.61
TMEM254-213ENST00000613758 NCOA3Q9Y6Q9 1424 aa18.84■□□□□ 0.61
TMEM254-213ENST00000613758 ATP7BP35670 1465 aa18.83■□□□□ 0.61
TMEM254-213ENST00000613758 PPIP5K1Q6PFW1 1433 aa18.83■□□□□ 0.61
TMEM254-213ENST00000613758 ANKRD36BQ8N2N9 1353 aa18.83■□□□□ 0.61
TMEM254-213ENST00000613758 C19orf44Q9H6X5 657 aa18.83■□□□□ 0.61
TMEM254-213ENST00000613758 CNGB1Q14028 1251 aaPredicted RBP18.83■□□□□ 0.6
TMEM254-213ENST00000613758 CDC42BPGQ6DT37 1551 aa18.83■□□□□ 0.6
TMEM254-213ENST00000613758 HDGFL2Q7Z4V5 671 aaPredicted RBP18.82■□□□□ 0.6
TMEM254-213ENST00000613758 ANKARQ7Z5J8 1434 aa18.81■□□□□ 0.6
TMEM254-213ENST00000613758 PRKRIP1Q9H875 184 aaPredicted RBP18.81■□□□□ 0.6
TMEM254-213ENST00000613758 A0A1W2PP64 1363 aa18.8■□□□□ 0.6
TMEM254-213ENST00000613758 FMN2Q9NZ56 1722 aa18.8■□□□□ 0.6
TMEM254-213ENST00000613758 LRRC7Q96NW7 1537 aa18.8■□□□□ 0.6
TMEM254-213ENST00000613758 CD163L1Q9NR16 1453 aa18.79■□□□□ 0.6
TMEM254-213ENST00000613758 PLEKHG3A1L390 1219 aa18.79■□□□□ 0.6
TMEM254-213ENST00000613758 USP32Q8NFA0 1604 aa18.79■□□□□ 0.6
TMEM254-213ENST00000613758 AMER1Q5JTC6 1135 aaPredicted RBP18.79■□□□□ 0.6
TMEM254-213ENST00000613758 NSD3Q9BZ95 1437 aa18.79■□□□□ 0.6
TMEM254-213ENST00000613758 CC2D1BQ5T0F9 858 aaKnown RBP18.78■□□□□ 0.6
TMEM254-213ENST00000613758 ATF3P18847 181 aa18.77■□□□□ 0.6
TMEM254-213ENST00000613758 KTN1Q86UP2 1357 aaKnown RBP18.77■□□□□ 0.6
TMEM254-213ENST00000613758 CPSF1Q10570 1443 aaKnown RBP18.76■□□□□ 0.59
TMEM254-213ENST00000613758 TOPAZ1Q8N9V7 1692 aa18.76■□□□□ 0.59
TMEM254-213ENST00000613758 MSH6P52701 1360 aa18.76■□□□□ 0.59
TMEM254-213ENST00000613758 PMFBP1Q8TBY8 1022 aa18.76■□□□□ 0.59
TMEM254-213ENST00000613758 ZNF692Q9BU19 519 aaPredicted RBP18.76■□□□□ 0.59
TMEM254-213ENST00000613758 ACEP12821 1306 aa18.76■□□□□ 0.59
TMEM254-213ENST00000613758 NPC1L1Q9UHC9 1359 aa18.75■□□□□ 0.59
TMEM254-213ENST00000613758 RALBP1Q15311 655 aa18.75■□□□□ 0.59
TMEM254-213ENST00000613758 RGPD8O14715 1765 aaPredicted RBP18.74■□□□□ 0.59
TMEM254-213ENST00000613758 CCER2I3L3R5 266 aa18.74■□□□□ 0.59
TMEM254-213ENST00000613758 CADPS2Q86UW7 1296 aa18.74■□□□□ 0.59
TMEM254-213ENST00000613758 DCCP43146 1447 aa18.74■□□□□ 0.59
TMEM254-213ENST00000613758 CGNL1Q0VF96 1302 aa18.74■□□□□ 0.59
TMEM254-213ENST00000613758 YTHDC1Q96MU7 727 aaKnown RBP18.74■□□□□ 0.59
TMEM254-213ENST00000613758 XIRP1Q702N8 1843 aaKnown RBP18.73■□□□□ 0.59
TMEM254-213ENST00000613758 ITSN1Q15811 1721 aa18.73■□□□□ 0.59
TMEM254-213ENST00000613758 ESCO1Q5FWF5 840 aa18.73■□□□□ 0.59
TMEM254-213ENST00000613758 NGDNQ8NEJ9 315 aaKnown RBP18.73■□□□□ 0.59
TMEM254-213ENST00000613758 PHF8Q9UPP1 1060 aa18.72■□□□□ 0.59
TMEM254-213ENST00000613758 PARD3Q8TEW0 1356 aa18.72■□□□□ 0.59
TMEM254-213ENST00000613758 POLR3AO14802 1390 aaPredicted RBP18.71■□□□□ 0.59
TMEM254-213ENST00000613758 C1orf167Q5SNV9 1468 aa18.7■□□□□ 0.58
TMEM254-213ENST00000613758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.7■□□□□ 0.58
TMEM254-213ENST00000613758 ORAI2Q96SN7 254 aa18.7■□□□□ 0.58
TMEM254-213ENST00000613758 EDC4Q6P2E9 1401 aaKnown RBP18.7■□□□□ 0.58
TMEM254-213ENST00000613758 MST1RQ04912 1400 aa18.69■□□□□ 0.58
TMEM254-213ENST00000613758 AKAP12Q02952 1782 aa18.69■□□□□ 0.58
TMEM254-213ENST00000613758 FYB1O15117 783 aa18.68■□□□□ 0.58
TMEM254-213ENST00000613758 LTBP4Q8N2S1 1624 aa18.68■□□□□ 0.58
TMEM254-213ENST00000613758 USP6P35125 1406 aa18.67■□□□□ 0.58
TMEM254-213ENST00000613758 NSD2O96028 1365 aa18.67■□□□□ 0.58
TMEM254-213ENST00000613758 MYBBP1AQ9BQG0 1328 aaKnown RBP18.67■□□□□ 0.58
TMEM254-213ENST00000613758 MORC1Q86VD1 984 aa18.67■□□□□ 0.58
TMEM254-213ENST00000613758 MON2Q7Z3U7 1717 aa18.67■□□□□ 0.58
TMEM254-213ENST00000613758 GGNBP2Q9H3C7 697 aa18.66■□□□□ 0.58
TMEM254-213ENST00000613758 TTC21BQ7Z4L5 1316 aa18.66■□□□□ 0.58
TMEM254-213ENST00000613758 PSME1Q06323 249 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms