RNA–Protein interactions for RNA: ENST00000613548.1

PCDH8-203, Transcript of protocadherin 8, humanhuman

TSL 2

Gene PCDH8, Length 744 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-203ENST00000613548 STK26Q9P289 416 aa22.06■■□□□ 1.12
PCDH8-203ENST00000613548 TOPAZ1Q8N9V7 1692 aa22.06■■□□□ 1.12
PCDH8-203ENST00000613548 KIF1AQ12756 1690 aa22.04■■□□□ 1.12
PCDH8-203ENST00000613548 PHLPP1O60346 1717 aa22.04■■□□□ 1.12
PCDH8-203ENST00000613548 NBPF8Q3BBV2 869 aa22.04■■□□□ 1.12
PCDH8-203ENST00000613548 ROCK2O75116 1388 aaKnown RBP22.03■■□□□ 1.12
PCDH8-203ENST00000613548 AHDC1Q5TGY3 1603 aaPredicted RBP22.03■■□□□ 1.12
PCDH8-203ENST00000613548 TOM1O60784 492 aa22.02■■□□□ 1.12
PCDH8-203ENST00000613548 NBPF1Q3BBV0 1214 aa22.02■■□□□ 1.12
PCDH8-203ENST00000613548 C14orf37Q86TY3 774 aa22.02■■□□□ 1.12
PCDH8-203ENST00000613548 SIRT1Q96EB6 747 aa22.02■■□□□ 1.12
PCDH8-203ENST00000613548 C19orf44Q9H6X5 657 aa22.02■■□□□ 1.12
PCDH8-203ENST00000613548 COL16A1Q07092 1604 aaPredicted RBP22.01■■□□□ 1.11
PCDH8-203ENST00000613548 TIMELESSQ9UNS1 1208 aa21.99■■□□□ 1.11
PCDH8-203ENST00000613548 TULP4Q9NRJ4 1543 aa21.98■■□□□ 1.11
PCDH8-203ENST00000613548 WAPLQ7Z5K2 1190 aa21.98■■□□□ 1.11
PCDH8-203ENST00000613548 ILDR1Q86SU0 546 aaPredicted RBP21.98■■□□□ 1.11
PCDH8-203ENST00000613548 CADPS2Q86UW7 1296 aa21.98■■□□□ 1.11
PCDH8-203ENST00000613548 PRAM1Q96QH2 718 aa21.98■■□□□ 1.11
PCDH8-203ENST00000613548 TRAK1Q9UPV9 953 aa21.98■■□□□ 1.11
PCDH8-203ENST00000613548 C1orf167Q5SNV9 1468 aa21.97■■□□□ 1.11
PCDH8-203ENST00000613548 ATF3P18847 181 aa21.95■■□□□ 1.1
PCDH8-203ENST00000613548 EIF3AQ14152 1382 aaKnown RBP21.94■■□□□ 1.1
PCDH8-203ENST00000613548 ATP7BP35670 1465 aa21.93■■□□□ 1.1
PCDH8-203ENST00000613548 PIP4K2BP78356 416 aa21.93■■□□□ 1.1
PCDH8-203ENST00000613548 SHPRHQ149N8 1683 aa21.92■■□□□ 1.1
PCDH8-203ENST00000613548 ANKARQ7Z5J8 1434 aa21.92■■□□□ 1.1
PCDH8-203ENST00000613548 SCAF1Q9H7N4 1312 aaKnown RBP21.91■■□□□ 1.1
PCDH8-203ENST00000613548 SAFB2Q14151 953 aaKnown RBP eCLIP21.9■■□□□ 1.1
PCDH8-203ENST00000613548 POGKQ9P215 609 aa21.9■■□□□ 1.1
PCDH8-203ENST00000613548 SLAIN2Q9P270 581 aa21.9■■□□□ 1.1
PCDH8-203ENST00000613548 SBNO2Q9Y2G9 1366 aa21.89■■□□□ 1.1
PCDH8-203ENST00000613548 CENPJQ9HC77 1338 aaPredicted RBP21.88■■□□□ 1.09
PCDH8-203ENST00000613548 TRPM3Q9HCF6 1732 aaPredicted RBP21.87■■□□□ 1.09
PCDH8-203ENST00000613548 MINK1Q8N4C8 1332 aaPredicted RBP21.86■■□□□ 1.09
PCDH8-203ENST00000613548 AKAP12Q02952 1782 aa21.86■■□□□ 1.09
PCDH8-203ENST00000613548 BRINP3Q76B58 766 aa21.85■■□□□ 1.09
PCDH8-203ENST00000613548 CARD11Q9BXL7 1154 aa21.85■■□□□ 1.09
PCDH8-203ENST00000613548 ABCA3Q99758 1704 aa21.83■■□□□ 1.09
PCDH8-203ENST00000613548 PXDNQ92626 1479 aa21.83■■□□□ 1.08
PCDH8-203ENST00000613548 COL22A1Q8NFW1 1626 aaPredicted RBP21.82■■□□□ 1.08
PCDH8-203ENST00000613548 HIRIP3Q9BW71 556 aaPredicted RBP21.82■■□□□ 1.08
PCDH8-203ENST00000613548 USP47Q96K76 1375 aa21.82■■□□□ 1.08
PCDH8-203ENST00000613548 ALS2Q96Q42 1657 aa21.81■■□□□ 1.08
PCDH8-203ENST00000613548 MON2Q7Z3U7 1717 aa21.8■■□□□ 1.08
PCDH8-203ENST00000613548 HSPA1LP34931 641 aa21.8■■□□□ 1.08
PCDH8-203ENST00000613548 PRR36Q9H6K5 1346 aa21.8■■□□□ 1.08
PCDH8-203ENST00000613548 MYOM1P52179 1685 aa21.79■■□□□ 1.08
PCDH8-203ENST00000613548 NRKQ7Z2Y5 1582 aa21.79■■□□□ 1.08
PCDH8-203ENST00000613548 WASLO00401 505 aaPredicted RBP21.79■■□□□ 1.08
PCDH8-203ENST00000613548 CRYBG1Q9Y4K1 1723 aa21.79■■□□□ 1.08
PCDH8-203ENST00000613548 MARF1Q9Y4F3 1742 aaKnown RBP21.77■■□□□ 1.08
PCDH8-203ENST00000613548 MED1Q15648 1581 aaPredicted RBP21.76■■□□□ 1.07
PCDH8-203ENST00000613548 ORAI2Q96SN7 254 aa21.76■■□□□ 1.07
PCDH8-203ENST00000613548 NUTM2FA1L443 756 aa21.75■■□□□ 1.07
PCDH8-203ENST00000613548 ESCO1Q5FWF5 840 aa21.71■■□□□ 1.07
PCDH8-203ENST00000613548 NPHP3Q7Z494 1330 aa21.71■■□□□ 1.07
PCDH8-203ENST00000613548 CDK19Q9BWU1 502 aa21.7■■□□□ 1.06
PCDH8-203ENST00000613548 SOS2Q07890 1332 aaPredicted RBP21.7■■□□□ 1.06
PCDH8-203ENST00000613548 EVC2Q86UK5 1308 aa21.7■■□□□ 1.06
PCDH8-203ENST00000613548 PPIP5K1Q6PFW1 1433 aa21.7■■□□□ 1.06
PCDH8-203ENST00000613548 DDX17Q92841 729 aaKnown RBP21.69■■□□□ 1.06
PCDH8-203ENST00000613548 TESK2Q96S53 571 aa21.69■■□□□ 1.06
PCDH8-203ENST00000613548 PHRF1Q9P1Y6 1649 aaKnown RBP21.69■■□□□ 1.06
PCDH8-203ENST00000613548 PHF8Q9UPP1 1060 aa21.68■■□□□ 1.06
PCDH8-203ENST00000613548 POLR3AO14802 1390 aaPredicted RBP21.68■■□□□ 1.06
PCDH8-203ENST00000613548 JCADQ9P266 1359 aa21.68■■□□□ 1.06
PCDH8-203ENST00000613548 USP54Q70EL1 1684 aa21.67■■□□□ 1.06
PCDH8-203ENST00000613548 ATAD2Q6PL18 1390 aa21.67■■□□□ 1.06
PCDH8-203ENST00000613548 ST20-MTHFSA0A0A6YYL1 179 aa21.67■■□□□ 1.06
PCDH8-203ENST00000613548 PIK3C2AO00443 1686 aa21.66■■□□□ 1.06
PCDH8-203ENST00000613548 TNS3Q68CZ2 1445 aa21.66■■□□□ 1.06
PCDH8-203ENST00000613548 PNPLA6Q8IY17 1366 aa21.66■■□□□ 1.06
PCDH8-203ENST00000613548 DISP3Q9P2K9 1392 aa21.66■■□□□ 1.06
PCDH8-203ENST00000613548 NUDT16Q96DE0 195 aaKnown RBP21.66■■□□□ 1.06
PCDH8-203ENST00000613548 LRP6O75581 1613 aa21.66■■□□□ 1.06
PCDH8-203ENST00000613548 SRPK2P78362 688 aaKnown RBP21.65■■□□□ 1.06
PCDH8-203ENST00000613548 CABP2Q9NPB3 220 aa21.64■■□□□ 1.05
PCDH8-203ENST00000613548 FOXO3O43524 673 aa21.62■■□□□ 1.05
PCDH8-203ENST00000613548 CCDC61Q9Y6R9 512 aa21.62■■□□□ 1.05
PCDH8-203ENST00000613548 CD163L1Q9NR16 1453 aa21.62■■□□□ 1.05
PCDH8-203ENST00000613548 SBNO1A3KN83 1393 aa21.61■■□□□ 1.05
PCDH8-203ENST00000613548 KIF20BQ96Q89 1820 aa21.61■■□□□ 1.05
PCDH8-203ENST00000613548 PMFBP1Q8TBY8 1022 aa21.6■■□□□ 1.05
PCDH8-203ENST00000613548 USP6P35125 1406 aa21.59■■□□□ 1.05
PCDH8-203ENST00000613548 XPCQ01831 940 aaPredicted RBP21.59■■□□□ 1.05
PCDH8-203ENST00000613548 CPSF1Q10570 1443 aaKnown RBP21.58■■□□□ 1.05
PCDH8-203ENST00000613548 PLEKHG3A1L390 1219 aa21.58■■□□□ 1.05
PCDH8-203ENST00000613548 PLCH1Q4KWH8 1693 aa21.58■■□□□ 1.05
PCDH8-203ENST00000613548 NINLQ9Y2I6 1382 aa21.58■■□□□ 1.04
PCDH8-203ENST00000613548 LRRC59Q96AG4 307 aaKnown RBP21.57■■□□□ 1.04
PCDH8-203ENST00000613548 SPATA31A6Q5VVP1 1343 aa21.56■■□□□ 1.04
PCDH8-203ENST00000613548 SPATA31A3Q5VYP0 1347 aa21.56■■□□□ 1.04
PCDH8-203ENST00000613548 EIF4G2P78344 907 aaKnown RBP eCLIP21.56■■□□□ 1.04
PCDH8-203ENST00000613548 PUS7Q96PZ0 661 aaKnown RBP21.56■■□□□ 1.04
PCDH8-203ENST00000613548 ACEP12821 1306 aa21.55■■□□□ 1.04
PCDH8-203ENST00000613548 SSH2Q76I76 1423 aa21.55■■□□□ 1.04
PCDH8-203ENST00000613548 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.55■■□□□ 1.04
PCDH8-203ENST00000613548 SLC24A1O60721 1099 aa21.55■■□□□ 1.04
PCDH8-203ENST00000613548 HSPA5P11021 654 aaKnown RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms