RNA–Protein interactions for RNA: ENST00000613405.4

TRAK1-210, Transcript of trafficking kinesin protein 1, humanhuman

TSL 2 BASIC

Gene TRAK1, Length 4,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-210ENST00000613405 API5Q9BZZ5 524 aaKnown RBP16.19■□□□□ 0.18
TRAK1-210ENST00000613405 LAMC3Q9Y6N6 1575 aa16.19■□□□□ 0.18
TRAK1-210ENST00000613405 ZNF592Q92610 1267 aa16.19■□□□□ 0.18
TRAK1-210ENST00000613405 PRAM1Q96QH2 718 aa16.19■□□□□ 0.18
TRAK1-210ENST00000613405 SF3A1Q15459 793 aaKnown RBP16.18■□□□□ 0.18
TRAK1-210ENST00000613405 EIF2S2P20042 333 aaKnown RBP16.18■□□□□ 0.18
TRAK1-210ENST00000613405 PDE3AQ14432 1141 aa16.18■□□□□ 0.18
TRAK1-210ENST00000613405 BCAR3O75815 825 aa16.18■□□□□ 0.18
TRAK1-210ENST00000613405 GNAI1P63096 354 aa16.18■□□□□ 0.18
TRAK1-210ENST00000613405 RNF214Q8ND24 703 aa16.18■□□□□ 0.18
TRAK1-210ENST00000613405 MAP7D2Q96T17 732 aa16.18■□□□□ 0.18
TRAK1-210ENST00000613405 URB2Q14146 1524 aaKnown RBP16.17■□□□□ 0.18
TRAK1-210ENST00000613405 TPM2P07951 284 aa16.17■□□□□ 0.18
TRAK1-210ENST00000613405 GORABQ5T7V8 394 aa16.17■□□□□ 0.18
TRAK1-210ENST00000613405 INTS3Q68E01 1043 aaKnown RBP16.17■□□□□ 0.18
TRAK1-210ENST00000613405 ANO2Q9NQ90 1003 aa16.17■□□□□ 0.18
TRAK1-210ENST00000613405 KIF3AQ9Y496 699 aa16.17■□□□□ 0.18
TRAK1-210ENST00000613405 PKNOX2Q96KN3 472 aa16.17■□□□□ 0.18
TRAK1-210ENST00000613405 CAVIN1Q6NZI2 390 aaKnown RBP16.16■□□□□ 0.18
TRAK1-210ENST00000613405 GOLGA6L1Q8N7Z2 621 aa16.16■□□□□ 0.18
TRAK1-210ENST00000613405 H3BQV1 296 aa16.16■□□□□ 0.18
TRAK1-210ENST00000613405 IFFO2Q5TF58 517 aa16.16■□□□□ 0.18
TRAK1-210ENST00000613405 MAGI1Q96QZ7 1491 aaPredicted RBP16.16■□□□□ 0.18
TRAK1-210ENST00000613405 ERBINQ96RT1 1412 aa16.15■□□□□ 0.18
TRAK1-210ENST00000613405 C1orf141Q5JVX7 400 aa16.15■□□□□ 0.18
TRAK1-210ENST00000613405 NCOA1Q15788 1441 aa16.15■□□□□ 0.18
TRAK1-210ENST00000613405 FKBP5Q13451 457 aaPredicted RBP16.15■□□□□ 0.18
TRAK1-210ENST00000613405 PTPN23Q9H3S7 1636 aa16.14■□□□□ 0.17
TRAK1-210ENST00000613405 CUL7Q14999 1698 aa16.14■□□□□ 0.17
TRAK1-210ENST00000613405 PRKAR2BP31323 418 aa16.14■□□□□ 0.17
TRAK1-210ENST00000613405 TAF7LQ5H9L4 462 aa16.14■□□□□ 0.17
TRAK1-210ENST00000613405 MTERF4Q7Z6M4 381 aaKnown RBP16.14■□□□□ 0.17
TRAK1-210ENST00000613405 CCDC34Q96HJ3 373 aa16.14■□□□□ 0.17
TRAK1-210ENST00000613405 CDC45O75419 566 aa16.14■□□□□ 0.17
TRAK1-210ENST00000613405 CCDC39Q9UFE4 941 aa16.14■□□□□ 0.17
TRAK1-210ENST00000613405 EXOSC9Q06265 439 aaKnown RBP16.13■□□□□ 0.17
TRAK1-210ENST00000613405 FAM184AQ8NB25 1140 aa16.13■□□□□ 0.17
TRAK1-210ENST00000613405 NUTM2GQ5VZR2 741 aa16.13■□□□□ 0.17
TRAK1-210ENST00000613405 DIAPH3Q9NSV4 1193 aa16.13■□□□□ 0.17
TRAK1-210ENST00000613405 BIVM-ERCC5R4GMW8 1640 aa16.13■□□□□ 0.17
TRAK1-210ENST00000613405 CAMSAP2Q08AD1 1489 aa16.13■□□□□ 0.17
TRAK1-210ENST00000613405 MCM4P33991 863 aa16.13■□□□□ 0.17
TRAK1-210ENST00000613405 PSME1Q06323 249 aa16.13■□□□□ 0.17
TRAK1-210ENST00000613405 SLC52A1Q9NWF4 448 aa16.13■□□□□ 0.17
TRAK1-210ENST00000613405 GRPEL1Q9HAV7 217 aa16.12■□□□□ 0.17
TRAK1-210ENST00000613405 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
TRAK1-210ENST00000613405 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
TRAK1-210ENST00000613405 TSPYL4Q9UJ04 414 aa16.12■□□□□ 0.17
TRAK1-210ENST00000613405 CCDC173Q0VFZ6 552 aa16.12■□□□□ 0.17
TRAK1-210ENST00000613405 TSR2Q969E8 191 aaKnown RBP16.12■□□□□ 0.17
TRAK1-210ENST00000613405 CCDC141Q6ZP82 1450 aa16.12■□□□□ 0.17
TRAK1-210ENST00000613405 CABP1Q9NZU7 370 aa16.12■□□□□ 0.17
TRAK1-210ENST00000613405 ZNF608Q9ULD9 1512 aaPredicted RBP16.11■□□□□ 0.17
TRAK1-210ENST00000613405 ESPNB1AK53 854 aa16.11■□□□□ 0.17
TRAK1-210ENST00000613405 NLRP6P59044 892 aa16.11■□□□□ 0.17
TRAK1-210ENST00000613405 TXNDC2Q86VQ3 553 aa16.11■□□□□ 0.17
TRAK1-210ENST00000613405 SKAP1Q86WV1 359 aa16.11■□□□□ 0.17
TRAK1-210ENST00000613405 ISY1Q9ULR0 285 aaKnown RBP16.11■□□□□ 0.17
TRAK1-210ENST00000613405 CCAR2Q8N163 923 aaKnown RBP16.11■□□□□ 0.17
TRAK1-210ENST00000613405 VPS37CA5D8V6 355 aaPredicted RBP16.1■□□□□ 0.17
TRAK1-210ENST00000613405 ZKSCAN1P17029 563 aaPredicted RBP16.1■□□□□ 0.17
TRAK1-210ENST00000613405 SMC3Q9UQE7 1217 aa16.1■□□□□ 0.17
TRAK1-210ENST00000613405 PRPF40AO75400 957 aaKnown RBP16.09■□□□□ 0.17
TRAK1-210ENST00000613405 C9orf78Q9NZ63 289 aaPredicted RBP16.09■□□□□ 0.17
TRAK1-210ENST00000613405 RUFY2Q8WXA3 655 aa16.09■□□□□ 0.17
TRAK1-210ENST00000613405 CCDC9Q9Y3X0 531 aaKnown RBP16.09■□□□□ 0.17
TRAK1-210ENST00000613405 BICD2Q8TD16 824 aa16.09■□□□□ 0.17
TRAK1-210ENST00000613405 IFT57Q9NWB7 429 aa16.09■□□□□ 0.17
TRAK1-210ENST00000613405 UNC13AQ9UPW8 1703 aa16.08■□□□□ 0.17
TRAK1-210ENST00000613405 CREBRFQ8IUR6 639 aa16.08■□□□□ 0.16
TRAK1-210ENST00000613405 CDK19Q9BWU1 502 aa16.08■□□□□ 0.16
TRAK1-210ENST00000613405 MBD3O95983 291 aa16.08■□□□□ 0.16
TRAK1-210ENST00000613405 TPM3P06753 285 aa16.07■□□□□ 0.16
TRAK1-210ENST00000613405 PTPRKQ15262 1439 aa16.07■□□□□ 0.16
TRAK1-210ENST00000613405 RRP9O43818 475 aaKnown RBP16.06■□□□□ 0.16
TRAK1-210ENST00000613405 RPRD2Q5VT52 1461 aaKnown RBP16.06■□□□□ 0.16
TRAK1-210ENST00000613405 NEXNQ0ZGT2 675 aa16.06■□□□□ 0.16
TRAK1-210ENST00000613405 RABEP1Q15276 862 aa16.05■□□□□ 0.16
TRAK1-210ENST00000613405 NEK4P51957 841 aa16.05■□□□□ 0.16
TRAK1-210ENST00000613405 HOMER1Q86YM7 354 aa16.05■□□□□ 0.16
TRAK1-210ENST00000613405 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.04■□□□□ 0.16
TRAK1-210ENST00000613405 SASS6Q6UVJ0 657 aa16.04■□□□□ 0.16
TRAK1-210ENST00000613405 TTC5Q8N0Z6 440 aa16.04■□□□□ 0.16
TRAK1-210ENST00000613405 NOC3LQ8WTT2 800 aaKnown RBP16.04■□□□□ 0.16
TRAK1-210ENST00000613405 C20orf194Q5TEA3 1177 aa16.03■□□□□ 0.16
TRAK1-210ENST00000613405 HMGN5P82970 282 aaKnown RBP16.03■□□□□ 0.16
TRAK1-210ENST00000613405 GPS2Q13227 327 aa16.03■□□□□ 0.16
TRAK1-210ENST00000613405 TWISTNBQ3B726 338 aaPredicted RBP16.03■□□□□ 0.16
TRAK1-210ENST00000613405 RPGRIP1LQ68CZ1 1315 aa16.02■□□□□ 0.16
TRAK1-210ENST00000613405 SULT6B1Q6IMI4 303 aa16.02■□□□□ 0.16
TRAK1-210ENST00000613405 BCL11BQ9C0K0 894 aaPredicted RBP16.02■□□□□ 0.16
TRAK1-210ENST00000613405 TSPY26PQ9H489 355 aa16.02■□□□□ 0.15
TRAK1-210ENST00000613405 WDR63Q8IWG1 891 aa16.01■□□□□ 0.15
TRAK1-210ENST00000613405 CHMP4CQ96CF2 233 aa16.01■□□□□ 0.15
TRAK1-210ENST00000613405 K7ELQ4 463 aaPredicted RBP16.01■□□□□ 0.15
TRAK1-210ENST00000613405 TEX35Q5T0J7 233 aa16.01■□□□□ 0.15
TRAK1-210ENST00000613405 SLC26A8Q96RN1 970 aa16.01■□□□□ 0.15
TRAK1-210ENST00000613405 ABTB2Q8N961 1025 aa16.01■□□□□ 0.15
TRAK1-210ENST00000613405 RASSF8Q8NHQ8 419 aa16.01■□□□□ 0.15
TRAK1-210ENST00000613405 NOB1Q9ULX3 412 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms