RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 CLTCQ00610 1675 aaKnown RBP16.66■□□□□ 0.26
PCDHGA4-202ENST00000612927 ARHGEF28Q8N1W1 1705 aaKnown RBP16.66■□□□□ 0.26
PCDHGA4-202ENST00000612927 SENP3Q9H4L4 574 aaPredicted RBP16.66■□□□□ 0.26
PCDHGA4-202ENST00000612927 ADAMTS8Q9UP79 889 aa16.66■□□□□ 0.26
PCDHGA4-202ENST00000612927 IL27Q8NEV9 243 aa16.65■□□□□ 0.26
PCDHGA4-202ENST00000612927 ARHGEF40Q8TER5 1519 aa16.65■□□□□ 0.26
PCDHGA4-202ENST00000612927 PDE3BQ13370 1112 aa16.64■□□□□ 0.25
PCDHGA4-202ENST00000612927 MLECQ14165 292 aa16.63■□□□□ 0.25
PCDHGA4-202ENST00000612927 PPP6R1Q9UPN7 881 aa16.62■□□□□ 0.25
PCDHGA4-202ENST00000612927 TULP4Q9NRJ4 1543 aa16.62■□□□□ 0.25
PCDHGA4-202ENST00000612927 EXOC6Q8TAG9 804 aa16.61■□□□□ 0.25
PCDHGA4-202ENST00000612927 WDR43Q15061 677 aaKnown RBP eCLIP16.61■□□□□ 0.25
PCDHGA4-202ENST00000612927 SLC12A5Q9H2X9 1139 aa16.61■□□□□ 0.25
PCDHGA4-202ENST00000612927 SPATA31D1Q6ZQQ2 1576 aa16.6■□□□□ 0.25
PCDHGA4-202ENST00000612927 NSD3Q9BZ95 1437 aa16.59■□□□□ 0.25
PCDHGA4-202ENST00000612927 STK26Q9P289 416 aa16.59■□□□□ 0.25
PCDHGA4-202ENST00000612927 PLEKHH1Q9ULM0 1364 aa16.58■□□□□ 0.24
PCDHGA4-202ENST00000612927 SAFB2Q14151 953 aaKnown RBP eCLIP16.58■□□□□ 0.24
PCDHGA4-202ENST00000612927 PLIN1O60240 522 aa16.57■□□□□ 0.24
PCDHGA4-202ENST00000612927 STAG3Q9UJ98 1225 aa16.57■□□□□ 0.24
PCDHGA4-202ENST00000612927 EVC2Q86UK5 1308 aa16.57■□□□□ 0.24
PCDHGA4-202ENST00000612927 TCERG1O14776 1098 aaKnown RBP16.57■□□□□ 0.24
PCDHGA4-202ENST00000612927 PPM1GO15355 546 aaPredicted RBP16.57■□□□□ 0.24
PCDHGA4-202ENST00000612927 PTPRMP28827 1452 aa16.56■□□□□ 0.24
PCDHGA4-202ENST00000612927 A2ML1A8K2U0 1454 aa16.56■□□□□ 0.24
PCDHGA4-202ENST00000612927 NEFMP07197 916 aa16.55■□□□□ 0.24
PCDHGA4-202ENST00000612927 ALKQ9UM73 1620 aa16.55■□□□□ 0.24
PCDHGA4-202ENST00000612927 CCDC146Q8IYE0 955 aa16.55■□□□□ 0.24
PCDHGA4-202ENST00000612927 YTHDC2Q9H6S0 1430 aaKnown RBP16.55■□□□□ 0.24
PCDHGA4-202ENST00000612927 CABP2Q9NPB3 220 aa16.54■□□□□ 0.24
PCDHGA4-202ENST00000612927 PUS7Q96PZ0 661 aaKnown RBP16.54■□□□□ 0.24
PCDHGA4-202ENST00000612927 USP32Q8NFA0 1604 aa16.53■□□□□ 0.24
PCDHGA4-202ENST00000612927 RIMS2Q9UQ26 1411 aa16.52■□□□□ 0.23
PCDHGA4-202ENST00000612927 MS4A1P11836 297 aa16.52■□□□□ 0.23
PCDHGA4-202ENST00000612927 PRAM1Q96QH2 718 aa16.52■□□□□ 0.23
PCDHGA4-202ENST00000612927 RTN4Q9NQC3 1192 aaKnown RBP16.51■□□□□ 0.23
PCDHGA4-202ENST00000612927 ZMYM3Q14202 1370 aa16.51■□□□□ 0.23
PCDHGA4-202ENST00000612927 ANKRD36BQ8N2N9 1353 aa16.51■□□□□ 0.23
PCDHGA4-202ENST00000612927 MORC1Q86VD1 984 aa16.51■□□□□ 0.23
PCDHGA4-202ENST00000612927 MINK1Q8N4C8 1332 aaPredicted RBP16.5■□□□□ 0.23
PCDHGA4-202ENST00000612927 ZNF521Q96K83 1311 aa16.49■□□□□ 0.23
PCDHGA4-202ENST00000612927 TNNT2P45379 298 aaPredicted RBP16.49■□□□□ 0.23
PCDHGA4-202ENST00000612927 DUSP27Q5VZP5 1158 aa16.49■□□□□ 0.23
PCDHGA4-202ENST00000612927 POGKQ9P215 609 aa16.49■□□□□ 0.23
PCDHGA4-202ENST00000612927 SRPK2P78362 688 aaKnown RBP16.48■□□□□ 0.23
PCDHGA4-202ENST00000612927 CRBNQ96SW2 442 aa16.48■□□□□ 0.23
PCDHGA4-202ENST00000612927 ESF1Q9H501 851 aaKnown RBP16.48■□□□□ 0.23
PCDHGA4-202ENST00000612927 POLR3AO14802 1390 aaPredicted RBP16.48■□□□□ 0.23
PCDHGA4-202ENST00000612927 CGNL1Q0VF96 1302 aa16.48■□□□□ 0.23
PCDHGA4-202ENST00000612927 SETD1AO15047 1707 aaKnown RBP16.47■□□□□ 0.23
PCDHGA4-202ENST00000612927 APAF1O14727 1248 aa16.47■□□□□ 0.23
PCDHGA4-202ENST00000612927 PDE4AP27815 886 aa16.47■□□□□ 0.23
PCDHGA4-202ENST00000612927 C20orf194Q5TEA3 1177 aa16.47■□□□□ 0.23
PCDHGA4-202ENST00000612927 BACH2Q9BYV9 841 aa16.47■□□□□ 0.23
PCDHGA4-202ENST00000612927 LAS1LQ9Y4W2 734 aaKnown RBP16.47■□□□□ 0.23
PCDHGA4-202ENST00000612927 GOLGA2Q08379 1002 aa16.46■□□□□ 0.23
PCDHGA4-202ENST00000612927 NPM2Q86SE8 214 aaKnown RBP16.46■□□□□ 0.23
PCDHGA4-202ENST00000612927 A0A1W2PP64 1363 aa16.46■□□□□ 0.23
PCDHGA4-202ENST00000612927 SHPRHQ149N8 1683 aa16.45■□□□□ 0.22
PCDHGA4-202ENST00000612927 PLEKHG5O94827 1062 aa16.45■□□□□ 0.22
PCDHGA4-202ENST00000612927 DDRGK1Q96HY6 314 aa16.45■□□□□ 0.22
PCDHGA4-202ENST00000612927 SPINK5Q9NQ38 1064 aaPredicted RBP16.45■□□□□ 0.22
PCDHGA4-202ENST00000612927 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.45■□□□□ 0.22
PCDHGA4-202ENST00000612927 NRXN3Q9Y4C0 1643 aa16.45■□□□□ 0.22
PCDHGA4-202ENST00000612927 NINLQ9Y2I6 1382 aa16.45■□□□□ 0.22
PCDHGA4-202ENST00000612927 ATAD2Q6PL18 1390 aa16.44■□□□□ 0.22
PCDHGA4-202ENST00000612927 DLC1Q96QB1 1528 aa16.43■□□□□ 0.22
PCDHGA4-202ENST00000612927 NSD2O96028 1365 aa16.43■□□□□ 0.22
PCDHGA4-202ENST00000612927 TNRQ92752 1358 aa16.43■□□□□ 0.22
PCDHGA4-202ENST00000612927 CD163L1Q9NR16 1453 aa16.42■□□□□ 0.22
PCDHGA4-202ENST00000612927 SLFN5Q08AF3 891 aa16.42■□□□□ 0.22
PCDHGA4-202ENST00000612927 GSE1Q14687 1217 aa16.42■□□□□ 0.22
PCDHGA4-202ENST00000612927 DMRT2Q9Y5R5 561 aa16.42■□□□□ 0.22
PCDHGA4-202ENST00000612927 ABCC11Q96J66 1382 aa16.42■□□□□ 0.22
PCDHGA4-202ENST00000612927 WAPLQ7Z5K2 1190 aa16.42■□□□□ 0.22
PCDHGA4-202ENST00000612927 PKNOX2Q96KN3 472 aa16.42■□□□□ 0.22
PCDHGA4-202ENST00000612927 CDK19Q9BWU1 502 aa16.42■□□□□ 0.22
PCDHGA4-202ENST00000612927 MTHFSP49914 203 aa16.41■□□□□ 0.22
PCDHGA4-202ENST00000612927 SKAP1Q86WV1 359 aa16.41■□□□□ 0.22
PCDHGA4-202ENST00000612927 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.4■□□□□ 0.22
PCDHGA4-202ENST00000612927 METP08581 1390 aa16.39■□□□□ 0.21
PCDHGA4-202ENST00000612927 TERF2IPQ9NYB0 399 aa16.38■□□□□ 0.21
PCDHGA4-202ENST00000612927 UBR1Q8IWV7 1749 aa16.37■□□□□ 0.21
PCDHGA4-202ENST00000612927 TRMT2AQ8IZ69 625 aaKnown RBP16.37■□□□□ 0.21
PCDHGA4-202ENST00000612927 GGNBP2Q9H3C7 697 aa16.37■□□□□ 0.21
PCDHGA4-202ENST00000612927 NLRP1Q9C000 1473 aa16.37■□□□□ 0.21
PCDHGA4-202ENST00000612927 CABP1Q9NZU7 370 aa16.36■□□□□ 0.21
PCDHGA4-202ENST00000612927 BRPF3Q9ULD4 1205 aa16.36■□□□□ 0.21
PCDHGA4-202ENST00000612927 CFAP53Q96M91 514 aa16.35■□□□□ 0.21
PCDHGA4-202ENST00000612927 RRP7AQ9Y3A4 280 aaKnown RBP16.35■□□□□ 0.21
PCDHGA4-202ENST00000612927 TMEM2Q9UHN6 1383 aa16.35■□□□□ 0.21
PCDHGA4-202ENST00000612927 NKTRP30414 1462 aaKnown RBP16.35■□□□□ 0.21
PCDHGA4-202ENST00000612927 FYB1O15117 783 aa16.35■□□□□ 0.21
PCDHGA4-202ENST00000612927 NEUROD2Q15784 382 aa16.35■□□□□ 0.21
PCDHGA4-202ENST00000612927 IQSEC2Q5JU85 1478 aa16.34■□□□□ 0.21
PCDHGA4-202ENST00000612927 ANKRD26Q9UPS8 1709 aa16.34■□□□□ 0.21
PCDHGA4-202ENST00000612927 HDGFL2Q7Z4V5 671 aaPredicted RBP16.34■□□□□ 0.21
PCDHGA4-202ENST00000612927 E9PSI1 815 aa16.33■□□□□ 0.21
PCDHGA4-202ENST00000612927 BCAR3O75815 825 aa16.33■□□□□ 0.21
PCDHGA4-202ENST00000612927 CEBPAP49715 358 aaPredicted RBP16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms