RNA–Protein interactions for RNA: ENST00000612761.1

CFDP1-211, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 395 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-211ENST00000612761 DDRGK1Q96HY6 314 aa9.88□□□□□ -0.83
CFDP1-211ENST00000612761 RSPH6AQ9H0K4 717 aa9.88□□□□□ -0.83
CFDP1-211ENST00000612761 PCDHGC3Q9UN70 934 aa9.88□□□□□ -0.83
CFDP1-211ENST00000612761 RSBN1LQ6PCB5 846 aaPredicted RBP9.87□□□□□ -0.83
CFDP1-211ENST00000612761 C6orf229H3BNL8 230 aa9.86□□□□□ -0.83
CFDP1-211ENST00000612761 PPEF1O14829 653 aaPredicted RBP9.86□□□□□ -0.83
CFDP1-211ENST00000612761 SPTLC1O15269 473 aa9.86□□□□□ -0.83
CFDP1-211ENST00000612761 PRKCSHP14314 528 aaPredicted RBP9.86□□□□□ -0.83
CFDP1-211ENST00000612761 MYSM1Q5VVJ2 828 aa9.86□□□□□ -0.83
CFDP1-211ENST00000612761 RIC3Q7Z5B4 369 aa9.86□□□□□ -0.83
CFDP1-211ENST00000612761 FAM117AQ9C073 453 aa9.86□□□□□ -0.83
CFDP1-211ENST00000612761 RETREG3Q86VR2 466 aa9.85□□□□□ -0.83
CFDP1-211ENST00000612761 SYMPKQ92797 1274 aaKnown RBP9.85□□□□□ -0.83
CFDP1-211ENST00000612761 PRDM9Q9NQV7 894 aa9.85□□□□□ -0.83
CFDP1-211ENST00000612761 PRKD2Q9BZL6 878 aa9.84□□□□□ -0.83
CFDP1-211ENST00000612761 SPDYE5A6NIY4 337 aa9.83□□□□□ -0.84
CFDP1-211ENST00000612761 MMP16P51512 607 aa9.83□□□□□ -0.84
CFDP1-211ENST00000612761 BRPF1P55201 1214 aaPredicted RBP9.83□□□□□ -0.84
CFDP1-211ENST00000612761 MTMR2Q13614 643 aa9.83□□□□□ -0.84
CFDP1-211ENST00000612761 V9GY48 417 aaPredicted RBP9.83□□□□□ -0.84
CFDP1-211ENST00000612761 PCDHB15Q9Y5E8 787 aa9.82□□□□□ -0.84
CFDP1-211ENST00000612761 DXOO77932 396 aaKnown RBP9.81□□□□□ -0.84
CFDP1-211ENST00000612761 CLK2P49760 499 aaKnown RBP9.81□□□□□ -0.84
CFDP1-211ENST00000612761 TUSC1Q2TAM9 212 aa9.81□□□□□ -0.84
CFDP1-211ENST00000612761 ZBTB3Q9H5J0 574 aa9.81□□□□□ -0.84
CFDP1-211ENST00000612761 LIMD1Q9UGP4 676 aa9.81□□□□□ -0.84
CFDP1-211ENST00000612761 FCF1Q9Y324 198 aaKnown RBP9.81□□□□□ -0.84
CFDP1-211ENST00000612761 PLEKHG3A1L390 1219 aa9.8□□□□□ -0.84
CFDP1-211ENST00000612761 SLC19A1P41440 591 aa9.8□□□□□ -0.84
CFDP1-211ENST00000612761 CSPP1Q1MSJ5 1256 aa9.8□□□□□ -0.84
CFDP1-211ENST00000612761 PRPF38BQ5VTL8 546 aaKnown RBP9.8□□□□□ -0.84
CFDP1-211ENST00000612761 POLR3EQ9NVU0 708 aa9.8□□□□□ -0.84
CFDP1-211ENST00000612761 JUNDP17535 347 aa9.79□□□□□ -0.84
CFDP1-211ENST00000612761 PRR7Q8TB68 274 aa9.79□□□□□ -0.84
CFDP1-211ENST00000612761 HRCP23327 699 aa9.78□□□□□ -0.84
CFDP1-211ENST00000612761 SKIV2LQ15477 1246 aaKnown RBP9.78□□□□□ -0.84
CFDP1-211ENST00000612761 SH3D19Q5HYK7 790 aa9.78□□□□□ -0.84
CFDP1-211ENST00000612761 PLA2G2CQ5R387 149 aa9.78□□□□□ -0.84
CFDP1-211ENST00000612761 NUTM2BA6NNL0 878 aaPredicted RBP9.77□□□□□ -0.85
CFDP1-211ENST00000612761 NUTM2EB1AL46 878 aaPredicted RBP9.77□□□□□ -0.85
CFDP1-211ENST00000612761 NUTM2DQ5VT03 806 aaPredicted RBP9.77□□□□□ -0.85
CFDP1-211ENST00000612761 NUTM2AQ8IVF1 878 aaPredicted RBP9.77□□□□□ -0.85
CFDP1-211ENST00000612761 CABLES1Q8TDN4 633 aa9.77□□□□□ -0.85
CFDP1-211ENST00000612761 LIAT1Q6ZQX7 453 aa9.76□□□□□ -0.85
CFDP1-211ENST00000612761 IL27Q8NEV9 243 aa9.76□□□□□ -0.85
CFDP1-211ENST00000612761 EMID1Q96A84 441 aaPredicted RBP9.76□□□□□ -0.85
CFDP1-211ENST00000612761 ATP1B4Q9UN42 357 aaPredicted RBP9.76□□□□□ -0.85
CFDP1-211ENST00000612761 ZBTB24O43167 697 aaPredicted RBP9.75□□□□□ -0.85
CFDP1-211ENST00000612761 LILRB3O75022 631 aa9.75□□□□□ -0.85
CFDP1-211ENST00000612761 RPIAP49247 311 aa9.75□□□□□ -0.85
CFDP1-211ENST00000612761 DESI1Q6ICB0 168 aa9.75□□□□□ -0.85
CFDP1-211ENST00000612761 QPCTQ16769 361 aa9.74□□□□□ -0.85
CFDP1-211ENST00000612761 SPRYD7Q5W111 196 aa9.74□□□□□ -0.85
CFDP1-211ENST00000612761 CCDC24Q8N4L8 307 aa9.74□□□□□ -0.85
CFDP1-211ENST00000612761 CFAP99D6REC4 459 aa9.73□□□□□ -0.85
CFDP1-211ENST00000612761 NUDT12Q9BQG2 462 aa9.73□□□□□ -0.85
CFDP1-211ENST00000612761 PTPRNQ16849 979 aa9.72□□□□□ -0.85
CFDP1-211ENST00000612761 ZNF598Q86UK7 904 aaKnown RBP9.72□□□□□ -0.85
CFDP1-211ENST00000612761 IRX2Q9BZI1 471 aaPredicted RBP9.72□□□□□ -0.85
CFDP1-211ENST00000612761 CD2BP2O95400 341 aaKnown RBP9.71□□□□□ -0.86
CFDP1-211ENST00000612761 CCNYL3P0C7X3 344 aa9.71□□□□□ -0.86
CFDP1-211ENST00000612761 PROCA1Q8NCQ7 364 aaPredicted RBP9.71□□□□□ -0.86
CFDP1-211ENST00000612761 GOPCQ9HD26 462 aa9.71□□□□□ -0.86
CFDP1-211ENST00000612761 RTL5Q5HYW3 569 aaPredicted RBP9.7□□□□□ -0.86
CFDP1-211ENST00000612761 ZNF697Q5TEC3 545 aa9.7□□□□□ -0.86
CFDP1-211ENST00000612761 TSC1Q92574 1164 aa9.7□□□□□ -0.86
CFDP1-211ENST00000612761 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.7□□□□□ -0.86
CFDP1-211ENST00000612761 LYPD8Q6UX82 237 aa9.69□□□□□ -0.86
CFDP1-211ENST00000612761 PCMTD1Q96MG8 357 aaPredicted RBP9.69□□□□□ -0.86
CFDP1-211ENST00000612761 HELBQ8NG08 1087 aaPredicted RBP9.68□□□□□ -0.86
CFDP1-211ENST00000612761 TRIM32Q13049 653 aa9.67□□□□□ -0.86
CFDP1-211ENST00000612761 EVA1BQ9NVM1 165 aa9.67□□□□□ -0.86
CFDP1-211ENST00000612761 PPP2R2DQ66LE6 453 aa9.66□□□□□ -0.86
CFDP1-211ENST00000612761 GFRA3O60609 400 aa9.65□□□□□ -0.86
CFDP1-211ENST00000612761 KCNH2Q12809 1159 aa9.65□□□□□ -0.86
CFDP1-211ENST00000612761 LAPTM4AQ15012 233 aa9.65□□□□□ -0.86
CFDP1-211ENST00000612761 PDZRN3Q9UPQ7 1066 aa9.65□□□□□ -0.86
CFDP1-211ENST00000612761 PER1O15534 1290 aaPredicted RBP9.64□□□□□ -0.87
CFDP1-211ENST00000612761 CTHP32929 405 aa9.64□□□□□ -0.87
CFDP1-211ENST00000612761 PTCRAQ6ISU1 281 aaPredicted RBP9.64□□□□□ -0.87
CFDP1-211ENST00000612761 TRIM67Q6ZTA4 783 aa9.63□□□□□ -0.87
CFDP1-211ENST00000612761 PRR20EP86478 221 aa9.62□□□□□ -0.87
CFDP1-211ENST00000612761 PRR20CP86479 221 aa9.62□□□□□ -0.87
CFDP1-211ENST00000612761 PRR20DP86480 221 aa9.62□□□□□ -0.87
CFDP1-211ENST00000612761 PRR20BP86481 221 aa9.62□□□□□ -0.87
CFDP1-211ENST00000612761 PRR20AP86496 221 aa9.62□□□□□ -0.87
CFDP1-211ENST00000612761 FOXC1Q12948 553 aa9.62□□□□□ -0.87
CFDP1-211ENST00000612761 FBXO31Q5XUX0 539 aaPredicted RBP9.62□□□□□ -0.87
CFDP1-211ENST00000612761 UNC93B1Q9H1C4 597 aa9.62□□□□□ -0.87
CFDP1-211ENST00000612761 NRG2O14511 850 aaPredicted RBP9.61□□□□□ -0.87
CFDP1-211ENST00000612761 GDF9O60383 454 aa9.61□□□□□ -0.87
CFDP1-211ENST00000612761 F12P00748 615 aaPredicted RBP9.61□□□□□ -0.87
CFDP1-211ENST00000612761 CTDSPL2Q05D32 466 aa9.61□□□□□ -0.87
CFDP1-211ENST00000612761 TNFRSF10AO00220 468 aa9.6□□□□□ -0.87
CFDP1-211ENST00000612761 RFC5P40937 340 aa9.6□□□□□ -0.87
CFDP1-211ENST00000612761 WNT7BP56706 349 aa9.6□□□□□ -0.87
CFDP1-211ENST00000612761 PKD2L1Q9P0L9 805 aa9.6□□□□□ -0.87
CFDP1-211ENST00000612761 AP1G2O75843 785 aa9.59□□□□□ -0.87
CFDP1-211ENST00000612761 MAP10Q9P2G4 905 aa9.59□□□□□ -0.87
CFDP1-211ENST00000612761 WNT7AO00755 349 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms