RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 SOS2Q07890 1332 aaPredicted RBP21.85■■□□□ 1.09
FDPS-221ENST00000612683 ADAMTS2O95450 1211 aa21.84■■□□□ 1.09
FDPS-221ENST00000612683 NUTM2FA1L443 756 aa21.83■■□□□ 1.09
FDPS-221ENST00000612683 NGLY1Q96IV0 654 aa21.83■■□□□ 1.09
FDPS-221ENST00000612683 QTRT2Q9H974 415 aaKnown RBP21.83■■□□□ 1.09
FDPS-221ENST00000612683 LRPPRCP42704 1394 aaKnown RBP21.83■■□□□ 1.08
FDPS-221ENST00000612683 ABCC11Q96J66 1382 aa21.81■■□□□ 1.08
FDPS-221ENST00000612683 FOXO3O43524 673 aa21.8■■□□□ 1.08
FDPS-221ENST00000612683 C14orf93Q9H972 538 aaKnown RBP21.79■■□□□ 1.08
FDPS-221ENST00000612683 NPHP3Q7Z494 1330 aa21.79■■□□□ 1.08
FDPS-221ENST00000612683 IFT172Q9UG01 1749 aa21.78■■□□□ 1.08
FDPS-221ENST00000612683 UPF1Q92900 1129 aaKnown RBP eCLIP21.78■■□□□ 1.08
FDPS-221ENST00000612683 PIK3C2GO75747 1445 aa21.78■■□□□ 1.08
FDPS-221ENST00000612683 LAMC1P11047 1609 aa21.77■■□□□ 1.08
FDPS-221ENST00000612683 RAB3GAP2Q9H2M9 1393 aa21.77■■□□□ 1.08
FDPS-221ENST00000612683 PLEKHH1Q9ULM0 1364 aa21.77■■□□□ 1.08
FDPS-221ENST00000612683 RBM6P78332 1123 aaKnown RBP21.77■■□□□ 1.08
FDPS-221ENST00000612683 XPCQ01831 940 aaPredicted RBP21.77■■□□□ 1.08
FDPS-221ENST00000612683 CFAP70Q5T0N1 1121 aa21.77■■□□□ 1.08
FDPS-221ENST00000612683 TECPR2O15040 1411 aa21.77■■□□□ 1.08
FDPS-221ENST00000612683 YTHDC2Q9H6S0 1430 aaKnown RBP21.76■■□□□ 1.07
FDPS-221ENST00000612683 CDC42BPGQ6DT37 1551 aa21.75■■□□□ 1.07
FDPS-221ENST00000612683 SIRT1Q96EB6 747 aa21.75■■□□□ 1.07
FDPS-221ENST00000612683 DHX57Q6P158 1386 aaKnown RBP21.74■■□□□ 1.07
FDPS-221ENST00000612683 USP21Q9UK80 565 aa21.73■■□□□ 1.07
FDPS-221ENST00000612683 CDK12Q9NYV4 1490 aaPredicted RBP21.72■■□□□ 1.07
FDPS-221ENST00000612683 SAFB2Q14151 953 aaKnown RBP eCLIP21.7■■□□□ 1.06
FDPS-221ENST00000612683 KDM2AQ9Y2K7 1162 aa21.7■■□□□ 1.06
FDPS-221ENST00000612683 KNDC1Q76NI1 1749 aa21.69■■□□□ 1.06
FDPS-221ENST00000612683 FNBP4Q8N3X1 1017 aaPredicted RBP21.69■■□□□ 1.06
FDPS-221ENST00000612683 TRPC5Q9UL62 973 aaPredicted RBP21.69■■□□□ 1.06
FDPS-221ENST00000612683 KRT28Q7Z3Y7 464 aa21.68■■□□□ 1.06
FDPS-221ENST00000612683 PRAM1Q96QH2 718 aa21.68■■□□□ 1.06
FDPS-221ENST00000612683 POGKQ9P215 609 aa21.68■■□□□ 1.06
FDPS-221ENST00000612683 PXDNQ92626 1479 aa21.68■■□□□ 1.06
FDPS-221ENST00000612683 NRXN1Q9ULB1 1477 aa21.67■■□□□ 1.06
FDPS-221ENST00000612683 MYOM2P54296 1465 aa21.66■■□□□ 1.06
FDPS-221ENST00000612683 DCAF11Q8TEB1 546 aa21.66■■□□□ 1.06
FDPS-221ENST00000612683 PHF8Q9UPP1 1060 aa21.65■■□□□ 1.06
FDPS-221ENST00000612683 RGS12O14924 1447 aa21.64■■□□□ 1.06
FDPS-221ENST00000612683 COL22A1Q8NFW1 1626 aaPredicted RBP21.64■■□□□ 1.05
FDPS-221ENST00000612683 FMN2Q9NZ56 1722 aa21.63■■□□□ 1.05
FDPS-221ENST00000612683 SPATA31A3Q5VYP0 1347 aa21.63■■□□□ 1.05
FDPS-221ENST00000612683 HRCP23327 699 aa21.63■■□□□ 1.05
FDPS-221ENST00000612683 PSME1Q06323 249 aa21.63■■□□□ 1.05
FDPS-221ENST00000612683 TRAK1Q9UPV9 953 aa21.63■■□□□ 1.05
FDPS-221ENST00000612683 PLEKHG5O94827 1062 aa21.6■■□□□ 1.05
FDPS-221ENST00000612683 RGPD8O14715 1765 aaPredicted RBP21.59■■□□□ 1.05
FDPS-221ENST00000612683 HAP1P54257 671 aaPredicted RBP21.59■■□□□ 1.05
FDPS-221ENST00000612683 LMOD2Q6P5Q4 547 aa21.59■■□□□ 1.05
FDPS-221ENST00000612683 STAC3Q96MF2 364 aa21.59■■□□□ 1.05
FDPS-221ENST00000612683 ATRNO75882 1429 aa21.58■■□□□ 1.05
FDPS-221ENST00000612683 PMFBP1Q8TBY8 1022 aa21.58■■□□□ 1.05
FDPS-221ENST00000612683 HIRIP3Q9BW71 556 aaPredicted RBP21.58■■□□□ 1.05
FDPS-221ENST00000612683 KIF1AQ12756 1690 aa21.58■■□□□ 1.05
FDPS-221ENST00000612683 BCL9LQ86UU0 1499 aa21.57■■□□□ 1.04
FDPS-221ENST00000612683 MINK1Q8N4C8 1332 aaPredicted RBP21.56■■□□□ 1.04
FDPS-221ENST00000612683 CABLES1Q8TDN4 633 aa21.56■■□□□ 1.04
FDPS-221ENST00000612683 GJD4Q96KN9 370 aaPredicted RBP21.56■■□□□ 1.04
FDPS-221ENST00000612683 DLC1Q96QB1 1528 aa21.55■■□□□ 1.04
FDPS-221ENST00000612683 UNC5CLQ8IV45 518 aa21.54■■□□□ 1.04
FDPS-221ENST00000612683 MARF1Q9Y4F3 1742 aaKnown RBP21.54■■□□□ 1.04
FDPS-221ENST00000612683 ATAD2Q6PL18 1390 aa21.53■■□□□ 1.04
FDPS-221ENST00000612683 TNS3Q68CZ2 1445 aa21.52■■□□□ 1.04
FDPS-221ENST00000612683 ADGRB1O14514 1584 aa21.52■■□□□ 1.04
FDPS-221ENST00000612683 SBNO1A3KN83 1393 aa21.51■■□□□ 1.03
FDPS-221ENST00000612683 ANKARQ7Z5J8 1434 aa21.5■■□□□ 1.03
FDPS-221ENST00000612683 WASLO00401 505 aaPredicted RBP21.5■■□□□ 1.03
FDPS-221ENST00000612683 ARHGEF10O15013 1369 aa21.48■■□□□ 1.03
FDPS-221ENST00000612683 SLIT2O94813 1529 aa21.47■■□□□ 1.03
FDPS-221ENST00000612683 NGDNQ8NEJ9 315 aaKnown RBP21.47■■□□□ 1.03
FDPS-221ENST00000612683 PRR36Q9H6K5 1346 aa21.47■■□□□ 1.03
FDPS-221ENST00000612683 EIF3AQ14152 1382 aaKnown RBP21.47■■□□□ 1.03
FDPS-221ENST00000612683 GPRASP1Q5JY77 1395 aa21.47■■□□□ 1.03
FDPS-221ENST00000612683 CCDC9Q9Y3X0 531 aaKnown RBP21.46■■□□□ 1.03
FDPS-221ENST00000612683 USP32Q8NFA0 1604 aa21.45■■□□□ 1.02
FDPS-221ENST00000612683 ADGRB2O60241 1585 aa21.44■■□□□ 1.02
FDPS-221ENST00000612683 FAM83GA6ND36 823 aa21.44■■□□□ 1.02
FDPS-221ENST00000612683 PAK3O75914 559 aaPredicted RBP21.43■■□□□ 1.02
FDPS-221ENST00000612683 VPS72Q15906 364 aa21.43■■□□□ 1.02
FDPS-221ENST00000612683 RALGAPBQ86X10 1494 aa21.43■■□□□ 1.02
FDPS-221ENST00000612683 CCDC125Q86Z20 511 aa21.42■■□□□ 1.02
FDPS-221ENST00000612683 NUDT16Q96DE0 195 aaKnown RBP21.42■■□□□ 1.02
FDPS-221ENST00000612683 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.42■■□□□ 1.02
FDPS-221ENST00000612683 TULP4Q9NRJ4 1543 aa21.4■■□□□ 1.02
FDPS-221ENST00000612683 SEPT12Q8IYM1 358 aa21.4■■□□□ 1.02
FDPS-221ENST00000612683 CDK19Q9BWU1 502 aa21.4■■□□□ 1.02
FDPS-221ENST00000612683 GLI3P10071 1580 aa21.39■■□□□ 1.01
FDPS-221ENST00000612683 NBPF1Q3BBV0 1214 aa21.37■■□□□ 1.01
FDPS-221ENST00000612683 BTG4Q9NY30 223 aa21.37■■□□□ 1.01
FDPS-221ENST00000612683 ARHGEF28Q8N1W1 1705 aaKnown RBP21.35■■□□□ 1.01
FDPS-221ENST00000612683 TRPM3Q9HCF6 1732 aaPredicted RBP21.35■■□□□ 1.01
FDPS-221ENST00000612683 ONECUT3O60422 494 aaPredicted RBP21.35■■□□□ 1.01
FDPS-221ENST00000612683 A0A0G2JS52 829 aa21.34■■□□□ 1.01
FDPS-221ENST00000612683 MYT1Q01538 1121 aa21.34■■□□□ 1.01
FDPS-221ENST00000612683 ZRANB1Q9UGI0 708 aa21.34■■□□□ 1.01
FDPS-221ENST00000612683 ABCA3Q99758 1704 aa21.34■■□□□ 1.01
FDPS-221ENST00000612683 NWD2Q9ULI1 1742 aa21.34■■□□□ 1.01
FDPS-221ENST00000612683 PLCH1Q4KWH8 1693 aa21.34■■□□□ 1.01
FDPS-221ENST00000612683 CCDC61Q9Y6R9 512 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms