RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 LRPPRCP42704 1394 aaKnown RBP26.42■■□□□ 1.82
SSBP1-215ENST00000612337 RXRBP28702 533 aa26.41■■□□□ 1.82
SSBP1-215ENST00000612337 ABCC11Q96J66 1382 aa26.39■■□□□ 1.82
SSBP1-215ENST00000612337 STK26Q9P289 416 aa26.39■■□□□ 1.82
SSBP1-215ENST00000612337 C8orf37Q96NL8 207 aa26.38■■□□□ 1.81
SSBP1-215ENST00000612337 KNDC1Q76NI1 1749 aa26.38■■□□□ 1.81
SSBP1-215ENST00000612337 CDK12Q9NYV4 1490 aaPredicted RBP26.37■■□□□ 1.81
SSBP1-215ENST00000612337 TMEM132EQ6IEE7 984 aa26.37■■□□□ 1.81
SSBP1-215ENST00000612337 ESCO1Q5FWF5 840 aa26.36■■□□□ 1.81
SSBP1-215ENST00000612337 WAPLQ7Z5K2 1190 aa26.36■■□□□ 1.81
SSBP1-215ENST00000612337 YTHDC2Q9H6S0 1430 aaKnown RBP26.34■■□□□ 1.81
SSBP1-215ENST00000612337 NPHP3Q7Z494 1330 aa26.34■■□□□ 1.81
SSBP1-215ENST00000612337 PLEKHH1Q9ULM0 1364 aa26.33■■□□□ 1.8
SSBP1-215ENST00000612337 NRXN1Q9ULB1 1477 aa26.32■■□□□ 1.8
SSBP1-215ENST00000612337 ADAMTS2O95450 1211 aa26.32■■□□□ 1.8
SSBP1-215ENST00000612337 RAB3GAP2Q9H2M9 1393 aa26.32■■□□□ 1.8
SSBP1-215ENST00000612337 C14orf93Q9H972 538 aaKnown RBP26.31■■□□□ 1.8
SSBP1-215ENST00000612337 QTRT2Q9H974 415 aaKnown RBP26.31■■□□□ 1.8
SSBP1-215ENST00000612337 COL22A1Q8NFW1 1626 aaPredicted RBP26.31■■□□□ 1.8
SSBP1-215ENST00000612337 MYOM2P54296 1465 aa26.3■■□□□ 1.8
SSBP1-215ENST00000612337 UPF1Q92900 1129 aaKnown RBP eCLIP26.3■■□□□ 1.8
SSBP1-215ENST00000612337 NGLY1Q96IV0 654 aa26.3■■□□□ 1.8
SSBP1-215ENST00000612337 PXDNQ92626 1479 aa26.3■■□□□ 1.8
SSBP1-215ENST00000612337 RBM6P78332 1123 aaKnown RBP26.29■■□□□ 1.8
SSBP1-215ENST00000612337 SIRT1Q96EB6 747 aa26.29■■□□□ 1.8
SSBP1-215ENST00000612337 NUTM2FA1L443 756 aa26.27■■□□□ 1.8
SSBP1-215ENST00000612337 FOXO3O43524 673 aa26.27■■□□□ 1.8
SSBP1-215ENST00000612337 FMN2Q9NZ56 1722 aa26.26■■□□□ 1.79
SSBP1-215ENST00000612337 CFAP70Q5T0N1 1121 aa26.25■■□□□ 1.79
SSBP1-215ENST00000612337 RGS12O14924 1447 aa26.24■■□□□ 1.79
SSBP1-215ENST00000612337 DHX57Q6P158 1386 aaKnown RBP26.24■■□□□ 1.79
SSBP1-215ENST00000612337 XPCQ01831 940 aaPredicted RBP26.23■■□□□ 1.79
SSBP1-215ENST00000612337 FNBP4Q8N3X1 1017 aaPredicted RBP26.22■■□□□ 1.79
SSBP1-215ENST00000612337 USP21Q9UK80 565 aa26.22■■□□□ 1.79
SSBP1-215ENST00000612337 KIF1AQ12756 1690 aa26.21■■□□□ 1.79
SSBP1-215ENST00000612337 TRPC5Q9UL62 973 aaPredicted RBP26.19■■□□□ 1.78
SSBP1-215ENST00000612337 MARF1Q9Y4F3 1742 aaKnown RBP26.17■■□□□ 1.78
SSBP1-215ENST00000612337 DLC1Q96QB1 1528 aa26.16■■□□□ 1.78
SSBP1-215ENST00000612337 PRAM1Q96QH2 718 aa26.16■■□□□ 1.78
SSBP1-215ENST00000612337 ATRNO75882 1429 aa26.15■■□□□ 1.78
SSBP1-215ENST00000612337 SPATA31A3Q5VYP0 1347 aa26.14■■□□□ 1.78
SSBP1-215ENST00000612337 HRCP23327 699 aa26.14■■□□□ 1.78
SSBP1-215ENST00000612337 RGPD8O14715 1765 aaPredicted RBP26.14■■□□□ 1.78
SSBP1-215ENST00000612337 ADGRB1O14514 1584 aa26.13■■□□□ 1.77
SSBP1-215ENST00000612337 PHF8Q9UPP1 1060 aa26.13■■□□□ 1.77
SSBP1-215ENST00000612337 SAFB2Q14151 953 aaKnown RBP eCLIP26.12■■□□□ 1.77
SSBP1-215ENST00000612337 KRT28Q7Z3Y7 464 aa26.12■■□□□ 1.77
SSBP1-215ENST00000612337 BCL9LQ86UU0 1499 aa26.11■■□□□ 1.77
SSBP1-215ENST00000612337 POGKQ9P215 609 aa26.11■■□□□ 1.77
SSBP1-215ENST00000612337 ADGRB2O60241 1585 aa26.08■■□□□ 1.77
SSBP1-215ENST00000612337 DCAF11Q8TEB1 546 aa26.08■■□□□ 1.77
SSBP1-215ENST00000612337 STAC3Q96MF2 364 aa26.08■■□□□ 1.77
SSBP1-215ENST00000612337 TNS3Q68CZ2 1445 aa26.07■■□□□ 1.76
SSBP1-215ENST00000612337 ANKARQ7Z5J8 1434 aa26.07■■□□□ 1.76
SSBP1-215ENST00000612337 PSME1Q06323 249 aa26.07■■□□□ 1.76
SSBP1-215ENST00000612337 KDM2AQ9Y2K7 1162 aa26.07■■□□□ 1.76
SSBP1-215ENST00000612337 EP400Q96L91 3159 aa26.07■■□□□ 1.76
SSBP1-215ENST00000612337 ATAD2Q6PL18 1390 aa26.06■■□□□ 1.76
SSBP1-215ENST00000612337 TRAK1Q9UPV9 953 aa26.05■■□□□ 1.76
SSBP1-215ENST00000612337 SBNO1A3KN83 1393 aa26.05■■□□□ 1.76
SSBP1-215ENST00000612337 USP32Q8NFA0 1604 aa26.04■■□□□ 1.76
SSBP1-215ENST00000612337 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.04■■□□□ 1.76
SSBP1-215ENST00000612337 SLIT2O94813 1529 aa26.04■■□□□ 1.76
SSBP1-215ENST00000612337 UNC5CLQ8IV45 518 aa26.02■■□□□ 1.76
SSBP1-215ENST00000612337 GJD4Q96KN9 370 aaPredicted RBP26.02■■□□□ 1.76
SSBP1-215ENST00000612337 ARHGEF10O15013 1369 aa26■■□□□ 1.75
SSBP1-215ENST00000612337 HIRIP3Q9BW71 556 aaPredicted RBP26■■□□□ 1.75
SSBP1-215ENST00000612337 EIF3AQ14152 1382 aaKnown RBP25.99■■□□□ 1.75
SSBP1-215ENST00000612337 PMFBP1Q8TBY8 1022 aa25.99■■□□□ 1.75
SSBP1-215ENST00000612337 MINK1Q8N4C8 1332 aaPredicted RBP25.98■■□□□ 1.75
SSBP1-215ENST00000612337 HAP1P54257 671 aaPredicted RBP25.98■■□□□ 1.75
SSBP1-215ENST00000612337 CABLES1Q8TDN4 633 aa25.97■■□□□ 1.75
SSBP1-215ENST00000612337 LMOD2Q6P5Q4 547 aa25.96■■□□□ 1.75
SSBP1-215ENST00000612337 TULP4Q9NRJ4 1543 aa25.96■■□□□ 1.75
SSBP1-215ENST00000612337 ABCA3Q99758 1704 aa25.96■■□□□ 1.75
SSBP1-215ENST00000612337 WASLO00401 505 aaPredicted RBP25.95■■□□□ 1.74
SSBP1-215ENST00000612337 RALGAPBQ86X10 1494 aa25.95■■□□□ 1.74
SSBP1-215ENST00000612337 GLI3P10071 1580 aa25.95■■□□□ 1.74
SSBP1-215ENST00000612337 PRR36Q9H6K5 1346 aa25.94■■□□□ 1.74
SSBP1-215ENST00000612337 TRPM3Q9HCF6 1732 aaPredicted RBP25.94■■□□□ 1.74
SSBP1-215ENST00000612337 ARHGEF28Q8N1W1 1705 aaKnown RBP25.92■■□□□ 1.74
SSBP1-215ENST00000612337 NWD2Q9ULI1 1742 aa25.92■■□□□ 1.74
SSBP1-215ENST00000612337 GPRASP1Q5JY77 1395 aa25.92■■□□□ 1.74
SSBP1-215ENST00000612337 PLCH1Q4KWH8 1693 aa25.91■■□□□ 1.74
SSBP1-215ENST00000612337 PLEKHG5O94827 1062 aa25.91■■□□□ 1.74
SSBP1-215ENST00000612337 SRCAPQ6ZRS2 3230 aa25.9■■□□□ 1.74
SSBP1-215ENST00000612337 VPS72Q15906 364 aa25.89■■□□□ 1.74
SSBP1-215ENST00000612337 ALS2Q96Q42 1657 aa25.89■■□□□ 1.73
SSBP1-215ENST00000612337 CCDC125Q86Z20 511 aa25.87■■□□□ 1.73
SSBP1-215ENST00000612337 NGDNQ8NEJ9 315 aaKnown RBP25.86■■□□□ 1.73
SSBP1-215ENST00000612337 KIAA1210Q9ULL0 1709 aa25.85■■□□□ 1.73
SSBP1-215ENST00000612337 FAM83GA6ND36 823 aa25.85■■□□□ 1.73
SSBP1-215ENST00000612337 ITSN1Q15811 1721 aa25.85■■□□□ 1.73
SSBP1-215ENST00000612337 ATP7BP35670 1465 aa25.85■■□□□ 1.73
SSBP1-215ENST00000612337 NUDT16Q96DE0 195 aaKnown RBP25.83■■□□□ 1.73
SSBP1-215ENST00000612337 BRWD3Q6RI45 1802 aa25.82■■□□□ 1.72
SSBP1-215ENST00000612337 SEPT12Q8IYM1 358 aa25.82■■□□□ 1.72
SSBP1-215ENST00000612337 ONECUT3O60422 494 aaPredicted RBP25.81■■□□□ 1.72
SSBP1-215ENST00000612337 CCDC9Q9Y3X0 531 aaKnown RBP25.81■■□□□ 1.72
SSBP1-215ENST00000612337 NRAPQ86VF7 1730 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms