RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 MYO3AQ8NEV4 1616 aa14.06□□□□□ -0.16
PCDHGC3-202ENST00000611950 NLRP13Q86W25 1043 aa14.05□□□□□ -0.16
PCDHGC3-202ENST00000611950 RNF17Q9BXT8 1623 aaKnown RBP14.05□□□□□ -0.16
PCDHGC3-202ENST00000611950 INO80Q9ULG1 1556 aaPredicted RBP14.04□□□□□ -0.16
PCDHGC3-202ENST00000611950 CEP170BQ9Y4F5 1589 aaPredicted RBP14.04□□□□□ -0.16
PCDHGC3-202ENST00000611950 CHMP4BQ9H444 224 aaKnown RBP14.04□□□□□ -0.16
PCDHGC3-202ENST00000611950 ZNF142P52746 1687 aaPredicted RBP14.03□□□□□ -0.16
PCDHGC3-202ENST00000611950 RTEL1-TNFRSF6BF6WH68 1400 aa14.02□□□□□ -0.16
PCDHGC3-202ENST00000611950 ZBTB47Q9UFB7 747 aaPredicted RBP14.02□□□□□ -0.17
PCDHGC3-202ENST00000611950 PPP6R1Q9UPN7 881 aa14.02□□□□□ -0.17
PCDHGC3-202ENST00000611950 LAS1LQ9Y4W2 734 aaKnown RBP14.02□□□□□ -0.17
PCDHGC3-202ENST00000611950 TRPM2O94759 1503 aa14.01□□□□□ -0.17
PCDHGC3-202ENST00000611950 TMF1P82094 1093 aa14□□□□□ -0.17
PCDHGC3-202ENST00000611950 IPO9Q96P70 1041 aaKnown RBP14□□□□□ -0.17
PCDHGC3-202ENST00000611950 FBXO3Q9UK99 471 aa14□□□□□ -0.17
PCDHGC3-202ENST00000611950 IPO4Q8TEX9 1081 aaKnown RBP14□□□□□ -0.17
PCDHGC3-202ENST00000611950 BBXQ8WY36 941 aaPredicted RBP14□□□□□ -0.17
PCDHGC3-202ENST00000611950 DEPDC5O75140 1603 aa14□□□□□ -0.17
PCDHGC3-202ENST00000611950 C20orf194Q5TEA3 1177 aa14□□□□□ -0.17
PCDHGC3-202ENST00000611950 BCCIPQ9P287 314 aaKnown RBP eCLIP14□□□□□ -0.17
PCDHGC3-202ENST00000611950 CLTCL1P53675 1640 aa13.99□□□□□ -0.17
PCDHGC3-202ENST00000611950 PIP4K2BP78356 416 aa13.99□□□□□ -0.17
PCDHGC3-202ENST00000611950 CRBNQ96SW2 442 aa13.99□□□□□ -0.17
PCDHGC3-202ENST00000611950 WASHC2CQ9Y4E1 1318 aa13.98□□□□□ -0.17
PCDHGC3-202ENST00000611950 SPHKAPQ2M3C7 1700 aa13.98□□□□□ -0.17
PCDHGC3-202ENST00000611950 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.98□□□□□ -0.17
PCDHGC3-202ENST00000611950 ADAMTS8Q9UP79 889 aa13.98□□□□□ -0.17
PCDHGC3-202ENST00000611950 IQGAP1P46940 1657 aa13.98□□□□□ -0.17
PCDHGC3-202ENST00000611950 CEP152O94986 1710 aa13.97□□□□□ -0.17
PCDHGC3-202ENST00000611950 KIF3BO15066 747 aa13.97□□□□□ -0.17
PCDHGC3-202ENST00000611950 FBXO31Q5XUX0 539 aaPredicted RBP13.96□□□□□ -0.17
PCDHGC3-202ENST00000611950 CCDC146Q8IYE0 955 aa13.96□□□□□ -0.17
PCDHGC3-202ENST00000611950 ZFP91Q96JP5 570 aaPredicted RBP13.96□□□□□ -0.17
PCDHGC3-202ENST00000611950 A2ML1A8K2U0 1454 aa13.96□□□□□ -0.17
PCDHGC3-202ENST00000611950 TET3O43151 1660 aa13.96□□□□□ -0.17
PCDHGC3-202ENST00000611950 VWDEQ8N2E2 1590 aa13.96□□□□□ -0.18
PCDHGC3-202ENST00000611950 PDE4AP27815 886 aa13.96□□□□□ -0.18
PCDHGC3-202ENST00000611950 SENP3Q9H4L4 574 aaPredicted RBP13.96□□□□□ -0.18
PCDHGC3-202ENST00000611950 GTF2E1P29083 439 aaPredicted RBP13.95□□□□□ -0.18
PCDHGC3-202ENST00000611950 CDK11BP21127 795 aaKnown RBP13.94□□□□□ -0.18
PCDHGC3-202ENST00000611950 RTL5Q5HYW3 569 aaPredicted RBP13.94□□□□□ -0.18
PCDHGC3-202ENST00000611950 BLMP54132 1417 aaPredicted RBP13.94□□□□□ -0.18
PCDHGC3-202ENST00000611950 HSPA1LP34931 641 aa13.93□□□□□ -0.18
PCDHGC3-202ENST00000611950 TNRQ92752 1358 aa13.93□□□□□ -0.18
PCDHGC3-202ENST00000611950 SCAF11Q99590 1463 aaKnown RBP13.93□□□□□ -0.18
PCDHGC3-202ENST00000611950 MROH1Q8NDA8 1641 aa13.93□□□□□ -0.18
PCDHGC3-202ENST00000611950 KNSTRNQ9Y448 316 aa13.93□□□□□ -0.18
PCDHGC3-202ENST00000611950 UGGT1Q9NYU2 1555 aa13.93□□□□□ -0.18
PCDHGC3-202ENST00000611950 TOM1O60784 492 aa13.92□□□□□ -0.18
PCDHGC3-202ENST00000611950 HSP90B1P14625 803 aaKnown RBP13.92□□□□□ -0.18
PCDHGC3-202ENST00000611950 SLC4A3P48751 1232 aa13.92□□□□□ -0.18
PCDHGC3-202ENST00000611950 WDR43Q15061 677 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCDHGC3-202ENST00000611950 KANK1Q14678 1352 aa13.92□□□□□ -0.18
PCDHGC3-202ENST00000611950 PDE3BQ13370 1112 aa13.91□□□□□ -0.18
PCDHGC3-202ENST00000611950 RRP9O43818 475 aaKnown RBP13.9□□□□□ -0.18
PCDHGC3-202ENST00000611950 ANKLE2Q86XL3 938 aa13.9□□□□□ -0.18
PCDHGC3-202ENST00000611950 PRDM4Q9UKN5 801 aa13.9□□□□□ -0.18
PCDHGC3-202ENST00000611950 NEURL4Q96JN8 1562 aa13.89□□□□□ -0.19
PCDHGC3-202ENST00000611950 INSRP06213 1382 aa13.89□□□□□ -0.19
PCDHGC3-202ENST00000611950 NPM3O75607 178 aaKnown RBP13.89□□□□□ -0.19
PCDHGC3-202ENST00000611950 SYNMO15061 1565 aa13.89□□□□□ -0.19
PCDHGC3-202ENST00000611950 HSP90AA2PQ14568 343 aaPredicted RBP13.89□□□□□ -0.19
PCDHGC3-202ENST00000611950 CHRM1P11229 460 aaPredicted RBP13.88□□□□□ -0.19
PCDHGC3-202ENST00000611950 TNNT2P45379 298 aaPredicted RBP13.88□□□□□ -0.19
PCDHGC3-202ENST00000611950 THEMISQ8N1K5 641 aaPredicted RBP13.88□□□□□ -0.19
PCDHGC3-202ENST00000611950 STAC3Q96MF2 364 aa13.88□□□□□ -0.19
PCDHGC3-202ENST00000611950 CPS1P31327 1500 aa13.88□□□□□ -0.19
PCDHGC3-202ENST00000611950 TCERG1O14776 1098 aaKnown RBP13.88□□□□□ -0.19
PCDHGC3-202ENST00000611950 PPP2R1AP30153 589 aa13.88□□□□□ -0.19
PCDHGC3-202ENST00000611950 RGS3P49796 1198 aa13.88□□□□□ -0.19
PCDHGC3-202ENST00000611950 MYOM1P52179 1685 aa13.88□□□□□ -0.19
PCDHGC3-202ENST00000611950 TEX2Q8IWB9 1127 aa13.87□□□□□ -0.19
PCDHGC3-202ENST00000611950 BACH2Q9BYV9 841 aa13.87□□□□□ -0.19
PCDHGC3-202ENST00000611950 PLEKHH1Q9ULM0 1364 aa13.87□□□□□ -0.19
PCDHGC3-202ENST00000611950 MED1Q15648 1581 aaPredicted RBP13.87□□□□□ -0.19
PCDHGC3-202ENST00000611950 CFAP70Q5T0N1 1121 aa13.87□□□□□ -0.19
PCDHGC3-202ENST00000611950 ADGRF5Q8IZF2 1346 aa13.87□□□□□ -0.19
PCDHGC3-202ENST00000611950 SECISBP2LQ93073 1101 aaKnown RBP13.86□□□□□ -0.19
PCDHGC3-202ENST00000611950 EFCAB6Q5THR3 1501 aa13.86□□□□□ -0.19
PCDHGC3-202ENST00000611950 CFAP65Q6ZU64 1925 aaKnown RBP13.86□□□□□ -0.19
PCDHGC3-202ENST00000611950 NEFMP07197 916 aa13.86□□□□□ -0.19
PCDHGC3-202ENST00000611950 KIAA1210Q9ULL0 1709 aa13.86□□□□□ -0.19
PCDHGC3-202ENST00000611950 CHGAP10645 457 aaKnown RBP13.86□□□□□ -0.19
PCDHGC3-202ENST00000611950 NEUROD2Q15784 382 aa13.85□□□□□ -0.19
PCDHGC3-202ENST00000611950 CDCA8Q53HL2 280 aa13.85□□□□□ -0.19
PCDHGC3-202ENST00000611950 ASXL1Q8IXJ9 1541 aa13.85□□□□□ -0.19
PCDHGC3-202ENST00000611950 SPINK5Q9NQ38 1064 aaPredicted RBP13.85□□□□□ -0.19
PCDHGC3-202ENST00000611950 MYOM2P54296 1465 aa13.85□□□□□ -0.19
PCDHGC3-202ENST00000611950 EIF3AQ14152 1382 aaKnown RBP13.84□□□□□ -0.19
PCDHGC3-202ENST00000611950 NPHP4O75161 1426 aaPredicted RBP13.84□□□□□ -0.19
PCDHGC3-202ENST00000611950 APAF1O14727 1248 aa13.84□□□□□ -0.19
PCDHGC3-202ENST00000611950 NLRP1Q9C000 1473 aa13.83□□□□□ -0.2
PCDHGC3-202ENST00000611950 FTSJ3Q8IY81 847 aaKnown RBP13.83□□□□□ -0.2
PCDHGC3-202ENST00000611950 ERVK-7P63135 1459 aa13.83□□□□□ -0.2
PCDHGC3-202ENST00000611950 DUSP27Q5VZP5 1158 aa13.82□□□□□ -0.2
PCDHGC3-202ENST00000611950 KDM5AP29375 1690 aaKnown RBP13.82□□□□□ -0.2
PCDHGC3-202ENST00000611950 IFT172Q9UG01 1749 aa13.82□□□□□ -0.2
PCDHGC3-202ENST00000611950 KIF1BO60333 1816 aa13.82□□□□□ -0.2
PCDHGC3-202ENST00000611950 BCAR3O75815 825 aa13.82□□□□□ -0.2
PCDHGC3-202ENST00000611950 CANXP27824 592 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms