RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 MLECQ14165 292 aa10.8□□□□□ -0.68
CBWD1-219ENST00000611457 VGFO15240 615 aaPredicted RBP10.79□□□□□ -0.68
CBWD1-219ENST00000611457 C1orf167Q5SNV9 1468 aa10.79□□□□□ -0.68
CBWD1-219ENST00000611457 PLEKHG2Q9H7P9 1386 aa10.79□□□□□ -0.68
CBWD1-219ENST00000611457 FAM50AQ14320 339 aaKnown RBP10.79□□□□□ -0.68
CBWD1-219ENST00000611457 C14orf93Q9H972 538 aaKnown RBP10.79□□□□□ -0.68
CBWD1-219ENST00000611457 TIMELESSQ9UNS1 1208 aa10.79□□□□□ -0.68
CBWD1-219ENST00000611457 METP08581 1390 aa10.78□□□□□ -0.68
CBWD1-219ENST00000611457 PIK3C2AO00443 1686 aa10.78□□□□□ -0.68
CBWD1-219ENST00000611457 ZNF335Q9H4Z2 1342 aaPredicted RBP10.78□□□□□ -0.68
CBWD1-219ENST00000611457 SBNO1A3KN83 1393 aa10.78□□□□□ -0.68
CBWD1-219ENST00000611457 QSER1Q2KHR3 1735 aa10.78□□□□□ -0.68
CBWD1-219ENST00000611457 PARP4Q9UKK3 1724 aaKnown RBP10.78□□□□□ -0.68
CBWD1-219ENST00000611457 CICQ96RK0 1608 aaPredicted RBP10.77□□□□□ -0.69
CBWD1-219ENST00000611457 HSPA2P54652 639 aa10.77□□□□□ -0.69
CBWD1-219ENST00000611457 KIF20BQ96Q89 1820 aa10.77□□□□□ -0.69
CBWD1-219ENST00000611457 TXNDC2Q86VQ3 553 aa10.76□□□□□ -0.69
CBWD1-219ENST00000611457 TMEM94Q12767 1356 aa10.76□□□□□ -0.69
CBWD1-219ENST00000611457 MSH6P52701 1360 aa10.76□□□□□ -0.69
CBWD1-219ENST00000611457 POLR3AO14802 1390 aaPredicted RBP10.75□□□□□ -0.69
CBWD1-219ENST00000611457 SSH2Q76I76 1423 aa10.74□□□□□ -0.69
CBWD1-219ENST00000611457 SPATA31A6Q5VVP1 1343 aa10.73□□□□□ -0.69
CBWD1-219ENST00000611457 ROBO2Q9HCK4 1378 aa10.73□□□□□ -0.69
CBWD1-219ENST00000611457 ZNF831Q5JPB2 1677 aa10.73□□□□□ -0.69
CBWD1-219ENST00000611457 PEAK1Q9H792 1746 aa10.72□□□□□ -0.69
CBWD1-219ENST00000611457 MYT1LQ9UL68 1186 aa10.72□□□□□ -0.69
CBWD1-219ENST00000611457 NINLQ9Y2I6 1382 aa10.71□□□□□ -0.69
CBWD1-219ENST00000611457 TOM1O60784 492 aa10.71□□□□□ -0.69
CBWD1-219ENST00000611457 RREB1Q92766 1687 aa10.71□□□□□ -0.7
CBWD1-219ENST00000611457 CHIC2Q9UKJ5 165 aa10.71□□□□□ -0.7
CBWD1-219ENST00000611457 RGPD1P0DJD0 1748 aa10.71□□□□□ -0.7
CBWD1-219ENST00000611457 SOS2Q07890 1332 aaPredicted RBP10.7□□□□□ -0.7
CBWD1-219ENST00000611457 ILDR1Q86SU0 546 aaPredicted RBP10.7□□□□□ -0.7
CBWD1-219ENST00000611457 JCADQ9P266 1359 aa10.7□□□□□ -0.7
CBWD1-219ENST00000611457 C19orf44Q9H6X5 657 aa10.69□□□□□ -0.7
CBWD1-219ENST00000611457 LRP6O75581 1613 aa10.69□□□□□ -0.7
CBWD1-219ENST00000611457 TNS1Q9HBL0 1735 aaKnown RBP10.68□□□□□ -0.7
CBWD1-219ENST00000611457 EHMT2Q96KQ7 1210 aa10.68□□□□□ -0.7
CBWD1-219ENST00000611457 SLIT2O94813 1529 aa10.67□□□□□ -0.7
CBWD1-219ENST00000611457 CADPS2Q86UW7 1296 aa10.67□□□□□ -0.7
CBWD1-219ENST00000611457 SLC4A1APQ9BWU0 796 aaKnown RBP10.66□□□□□ -0.7
CBWD1-219ENST00000611457 GLI3P10071 1580 aa10.66□□□□□ -0.7
CBWD1-219ENST00000611457 NFAT5O94916 1531 aa10.66□□□□□ -0.7
CBWD1-219ENST00000611457 ATRNO75882 1429 aa10.66□□□□□ -0.7
CBWD1-219ENST00000611457 PNPLA6Q8IY17 1366 aa10.66□□□□□ -0.7
CBWD1-219ENST00000611457 BCL9O00512 1426 aa10.65□□□□□ -0.7
CBWD1-219ENST00000611457 CPSF1Q10570 1443 aaKnown RBP10.64□□□□□ -0.71
CBWD1-219ENST00000611457 TNS3Q68CZ2 1445 aa10.64□□□□□ -0.71
CBWD1-219ENST00000611457 SHANK3Q9BYB0 1731 aa10.63□□□□□ -0.71
CBWD1-219ENST00000611457 SLC24A1O60721 1099 aa10.63□□□□□ -0.71
CBWD1-219ENST00000611457 ADGRF5Q8IZF2 1346 aa10.62□□□□□ -0.71
CBWD1-219ENST00000611457 PKD1L3Q7Z443 1732 aa10.62□□□□□ -0.71
CBWD1-219ENST00000611457 NCAPD2Q15021 1401 aa10.62□□□□□ -0.71
CBWD1-219ENST00000611457 LTN1O94822 1766 aa10.62□□□□□ -0.71
CBWD1-219ENST00000611457 CD163L1Q9NR16 1453 aa10.62□□□□□ -0.71
CBWD1-219ENST00000611457 SBF2Q86WG5 1849 aa10.61□□□□□ -0.71
CBWD1-219ENST00000611457 USP31Q70CQ4 1352 aa10.61□□□□□ -0.71
CBWD1-219ENST00000611457 ADAMTS7Q9UKP4 1686 aa10.61□□□□□ -0.71
CBWD1-219ENST00000611457 LRP5O75197 1615 aa10.61□□□□□ -0.71
CBWD1-219ENST00000611457 CPDO75976 1380 aa10.61□□□□□ -0.71
CBWD1-219ENST00000611457 AMOTL2Q9Y2J4 779 aa10.61□□□□□ -0.71
CBWD1-219ENST00000611457 ARHGEF10O15013 1369 aa10.6□□□□□ -0.71
CBWD1-219ENST00000611457 BRWD3Q6RI45 1802 aa10.6□□□□□ -0.71
CBWD1-219ENST00000611457 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.59□□□□□ -0.71
CBWD1-219ENST00000611457 USP19O94966 1318 aa10.58□□□□□ -0.72
CBWD1-219ENST00000611457 LRRC37A3O60309 1634 aa10.58□□□□□ -0.72
CBWD1-219ENST00000611457 DISP2A7MBM2 1401 aa10.58□□□□□ -0.72
CBWD1-219ENST00000611457 MYT1Q01538 1121 aa10.58□□□□□ -0.72
CBWD1-219ENST00000611457 SCAF1Q9H7N4 1312 aaKnown RBP10.57□□□□□ -0.72
CBWD1-219ENST00000611457 SMG6Q86US8 1419 aaKnown RBP10.57□□□□□ -0.72
CBWD1-219ENST00000611457 PLEKHG3A1L390 1219 aa10.57□□□□□ -0.72
CBWD1-219ENST00000611457 NHSQ6T4R5 1651 aa10.57□□□□□ -0.72
CBWD1-219ENST00000611457 SLAIN2Q9P270 581 aa10.56□□□□□ -0.72
CBWD1-219ENST00000611457 KIF24Q5T7B8 1368 aa10.55□□□□□ -0.72
CBWD1-219ENST00000611457 BRINP3Q76B58 766 aa10.55□□□□□ -0.72
CBWD1-219ENST00000611457 TRIM26Q12899 539 aaPredicted RBP10.53□□□□□ -0.72
CBWD1-219ENST00000611457 PAPPAQ13219 1627 aa10.53□□□□□ -0.72
CBWD1-219ENST00000611457 PROSER2Q86WR7 435 aaPredicted RBP10.53□□□□□ -0.72
CBWD1-219ENST00000611457 ATAD2Q6PL18 1390 aa10.52□□□□□ -0.73
CBWD1-219ENST00000611457 PLEKHH1Q9ULM0 1364 aa10.52□□□□□ -0.73
CBWD1-219ENST00000611457 STAG3Q9UJ98 1225 aa10.52□□□□□ -0.73
CBWD1-219ENST00000611457 LY75O60449 1722 aa10.52□□□□□ -0.73
CBWD1-219ENST00000611457 NUP188Q5SRE5 1749 aa10.52□□□□□ -0.73
CBWD1-219ENST00000611457 NPHP3Q7Z494 1330 aa10.51□□□□□ -0.73
CBWD1-219ENST00000611457 USP6P35125 1406 aa10.51□□□□□ -0.73
CBWD1-219ENST00000611457 OVOS2A0A0J9YW53 1432 aa10.51□□□□□ -0.73
CBWD1-219ENST00000611457 OVOS2Q6IE36 1432 aa10.51□□□□□ -0.73
CBWD1-219ENST00000611457 SPATA31A3Q5VYP0 1347 aa10.51□□□□□ -0.73
CBWD1-219ENST00000611457 BCL9LQ86UU0 1499 aa10.5□□□□□ -0.73
CBWD1-219ENST00000611457 RGPD5Q99666 1765 aa10.5□□□□□ -0.73
CBWD1-219ENST00000611457 UBAP1LF5GYI3 381 aa10.5□□□□□ -0.73
CBWD1-219ENST00000611457 FNBP4Q8N3X1 1017 aaPredicted RBP10.5□□□□□ -0.73
CBWD1-219ENST00000611457 PPP1R15AO75807 674 aaPredicted RBP10.49□□□□□ -0.73
CBWD1-219ENST00000611457 EDC4Q6P2E9 1401 aaKnown RBP10.49□□□□□ -0.73
CBWD1-219ENST00000611457 ONECUT3O60422 494 aaPredicted RBP10.48□□□□□ -0.73
CBWD1-219ENST00000611457 CASZ1Q86V15 1759 aa10.48□□□□□ -0.73
CBWD1-219ENST00000611457 HSPA1LP34931 641 aa10.48□□□□□ -0.73
CBWD1-219ENST00000611457 RTL1A6NKG5 1358 aa10.47□□□□□ -0.73
CBWD1-219ENST00000611457 VIRMAQ69YN4 1812 aaKnown RBP10.47□□□□□ -0.73
CBWD1-219ENST00000611457 LRRC59Q96AG4 307 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms