RNA–Protein interactions for RNA: ENST00000611278.4

ZNF248-208, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-208ENST00000611278 QTRT2Q9H974 415 aaKnown RBP12.07□□□□□ -0.48
ZNF248-208ENST00000611278 HMGB2P26583 209 aaKnown RBP12.06□□□□□ -0.48
ZNF248-208ENST00000611278 DHX57Q6P158 1386 aaKnown RBP12.06□□□□□ -0.48
ZNF248-208ENST00000611278 PTCH1Q13635 1447 aa12.05□□□□□ -0.48
ZNF248-208ENST00000611278 SLC24A1O60721 1099 aa12.05□□□□□ -0.48
ZNF248-208ENST00000611278 PNPLA6Q8IY17 1366 aa12.05□□□□□ -0.48
ZNF248-208ENST00000611278 TRIM26Q12899 539 aaPredicted RBP12.05□□□□□ -0.48
ZNF248-208ENST00000611278 CCDC125Q86Z20 511 aa12.05□□□□□ -0.48
ZNF248-208ENST00000611278 C8orf37Q96NL8 207 aa12.04□□□□□ -0.48
ZNF248-208ENST00000611278 PTPRUQ92729 1446 aa12.04□□□□□ -0.48
ZNF248-208ENST00000611278 PAK3O75914 559 aaPredicted RBP12.04□□□□□ -0.48
ZNF248-208ENST00000611278 ADAMTS2O95450 1211 aa12.04□□□□□ -0.48
ZNF248-208ENST00000611278 EVA1CP58658 441 aa12.03□□□□□ -0.48
ZNF248-208ENST00000611278 TRPC5Q9UL62 973 aaPredicted RBP12.03□□□□□ -0.48
ZNF248-208ENST00000611278 RGS12O14924 1447 aa12.03□□□□□ -0.48
ZNF248-208ENST00000611278 ZBTB7CA1YPR0 619 aa12.03□□□□□ -0.48
ZNF248-208ENST00000611278 ZRANB1Q9UGI0 708 aa12.02□□□□□ -0.48
ZNF248-208ENST00000611278 KDM2AQ9Y2K7 1162 aa12.02□□□□□ -0.48
ZNF248-208ENST00000611278 LAMC1P11047 1609 aa12.02□□□□□ -0.49
ZNF248-208ENST00000611278 ANKRD30BQ9BXX2 1392 aa12.02□□□□□ -0.49
ZNF248-208ENST00000611278 RRBP1Q9P2E9 1410 aaKnown RBP12.01□□□□□ -0.49
ZNF248-208ENST00000611278 SPHKAPQ2M3C7 1700 aa12□□□□□ -0.49
ZNF248-208ENST00000611278 NRXN3Q9Y4C0 1643 aa12□□□□□ -0.49
ZNF248-208ENST00000611278 C1orf167Q5SNV9 1468 aa11.99□□□□□ -0.49
ZNF248-208ENST00000611278 HFM1A2PYH4 1435 aa11.99□□□□□ -0.49
ZNF248-208ENST00000611278 PRAG1Q86YV5 1406 aa11.99□□□□□ -0.49
ZNF248-208ENST00000611278 USP21Q9UK80 565 aa11.99□□□□□ -0.49
ZNF248-208ENST00000611278 SOS2Q07890 1332 aaPredicted RBP11.98□□□□□ -0.49
ZNF248-208ENST00000611278 FNBP4Q8N3X1 1017 aaPredicted RBP11.97□□□□□ -0.49
ZNF248-208ENST00000611278 METP08581 1390 aa11.97□□□□□ -0.49
ZNF248-208ENST00000611278 ATRNO75882 1429 aa11.96□□□□□ -0.49
ZNF248-208ENST00000611278 COL22A1Q8NFW1 1626 aaPredicted RBP11.96□□□□□ -0.49
ZNF248-208ENST00000611278 CSB-PGBD3P0DP91 1061 aa11.96□□□□□ -0.49
ZNF248-208ENST00000611278 NALCNQ8IZF0 1738 aa11.96□□□□□ -0.5
ZNF248-208ENST00000611278 NUTM2FA1L443 756 aa11.96□□□□□ -0.5
ZNF248-208ENST00000611278 KIF1BO60333 1816 aa11.96□□□□□ -0.5
ZNF248-208ENST00000611278 GTF3C3Q9Y5Q9 886 aa11.95□□□□□ -0.5
ZNF248-208ENST00000611278 C11orf95C9JLR9 678 aaPredicted RBP11.95□□□□□ -0.5
ZNF248-208ENST00000611278 BAG6P46379 1132 aa11.95□□□□□ -0.5
ZNF248-208ENST00000611278 NEXMIFQ5QGS0 1516 aa11.95□□□□□ -0.5
ZNF248-208ENST00000611278 SRPK2P78362 688 aaKnown RBP11.95□□□□□ -0.5
ZNF248-208ENST00000611278 SAFB2Q14151 953 aaKnown RBP eCLIP11.95□□□□□ -0.5
ZNF248-208ENST00000611278 MPHOSPH9Q99550 1183 aa11.94□□□□□ -0.5
ZNF248-208ENST00000611278 PDE3BQ13370 1112 aa11.93□□□□□ -0.5
ZNF248-208ENST00000611278 NBPF8Q3BBV2 869 aa11.93□□□□□ -0.5
ZNF248-208ENST00000611278 NBPF14Q5TI25 921 aa11.93□□□□□ -0.5
ZNF248-208ENST00000611278 PRDM11Q9NQV5 511 aa11.92□□□□□ -0.5
ZNF248-208ENST00000611278 PPP1R1BQ9UD71 204 aaPredicted RBP11.91□□□□□ -0.5
ZNF248-208ENST00000611278 CDC42BPGQ6DT37 1551 aa11.91□□□□□ -0.5
ZNF248-208ENST00000611278 MYOM2P54296 1465 aa11.91□□□□□ -0.5
ZNF248-208ENST00000611278 DCAF11Q8TEB1 546 aa11.91□□□□□ -0.5
ZNF248-208ENST00000611278 PHF8Q9UPP1 1060 aa11.91□□□□□ -0.5
ZNF248-208ENST00000611278 CLTCL1P53675 1640 aa11.9□□□□□ -0.5
ZNF248-208ENST00000611278 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.9□□□□□ -0.5
ZNF248-208ENST00000611278 KRT28Q7Z3Y7 464 aa11.89□□□□□ -0.51
ZNF248-208ENST00000611278 MARF1Q9Y4F3 1742 aaKnown RBP11.89□□□□□ -0.51
ZNF248-208ENST00000611278 DDX17Q92841 729 aaKnown RBP11.89□□□□□ -0.51
ZNF248-208ENST00000611278 BLMP54132 1417 aaPredicted RBP11.89□□□□□ -0.51
ZNF248-208ENST00000611278 CDCA8Q53HL2 280 aa11.88□□□□□ -0.51
ZNF248-208ENST00000611278 GJD4Q96KN9 370 aaPredicted RBP11.88□□□□□ -0.51
ZNF248-208ENST00000611278 FOXO3O43524 673 aa11.88□□□□□ -0.51
ZNF248-208ENST00000611278 ORAI2Q96SN7 254 aa11.88□□□□□ -0.51
ZNF248-208ENST00000611278 ROBO2Q9HCK4 1378 aa11.88□□□□□ -0.51
ZNF248-208ENST00000611278 HDGFL2Q7Z4V5 671 aaPredicted RBP11.87□□□□□ -0.51
ZNF248-208ENST00000611278 ARHGEF10O15013 1369 aa11.86□□□□□ -0.51
ZNF248-208ENST00000611278 KIF1AQ12756 1690 aa11.86□□□□□ -0.51
ZNF248-208ENST00000611278 UNC5CLQ8IV45 518 aa11.86□□□□□ -0.51
ZNF248-208ENST00000611278 NLRP13Q86W25 1043 aa11.86□□□□□ -0.51
ZNF248-208ENST00000611278 PXDNQ92626 1479 aa11.86□□□□□ -0.51
ZNF248-208ENST00000611278 NEUROD1Q13562 356 aa11.85□□□□□ -0.51
ZNF248-208ENST00000611278 TRAK1Q9UPV9 953 aa11.85□□□□□ -0.51
ZNF248-208ENST00000611278 BCL9LQ86UU0 1499 aa11.85□□□□□ -0.51
ZNF248-208ENST00000611278 TECPR2O15040 1411 aa11.84□□□□□ -0.51
ZNF248-208ENST00000611278 MINK1Q8N4C8 1332 aaPredicted RBP11.84□□□□□ -0.51
ZNF248-208ENST00000611278 NAIPQ13075 1403 aa11.83□□□□□ -0.51
ZNF248-208ENST00000611278 NPM2Q86SE8 214 aaKnown RBP11.83□□□□□ -0.52
ZNF248-208ENST00000611278 POLR3GLQ9BT43 218 aa11.83□□□□□ -0.52
ZNF248-208ENST00000611278 PPLO60437 1756 aa11.83□□□□□ -0.52
ZNF248-208ENST00000611278 TONSLQ96HA7 1378 aa11.83□□□□□ -0.52
ZNF248-208ENST00000611278 TMC1Q8TDI8 760 aa11.83□□□□□ -0.52
ZNF248-208ENST00000611278 SLIT2O94813 1529 aa11.83□□□□□ -0.52
ZNF248-208ENST00000611278 LRP5O75197 1615 aa11.82□□□□□ -0.52
ZNF248-208ENST00000611278 SIRT1Q96EB6 747 aa11.82□□□□□ -0.52
ZNF248-208ENST00000611278 RALGAPBQ86X10 1494 aa11.82□□□□□ -0.52
ZNF248-208ENST00000611278 ABCC11Q96J66 1382 aa11.81□□□□□ -0.52
ZNF248-208ENST00000611278 SPATA31A3Q5VYP0 1347 aa11.81□□□□□ -0.52
ZNF248-208ENST00000611278 VPS72Q15906 364 aa11.81□□□□□ -0.52
ZNF248-208ENST00000611278 PRAM1Q96QH2 718 aa11.81□□□□□ -0.52
ZNF248-208ENST00000611278 STRN4Q9NRL3 753 aa11.81□□□□□ -0.52
ZNF248-208ENST00000611278 KNDC1Q76NI1 1749 aa11.81□□□□□ -0.52
ZNF248-208ENST00000611278 EVC2Q86UK5 1308 aa11.8□□□□□ -0.52
ZNF248-208ENST00000611278 NWD2Q9ULI1 1742 aa11.8□□□□□ -0.52
ZNF248-208ENST00000611278 XPCQ01831 940 aaPredicted RBP11.8□□□□□ -0.52
ZNF248-208ENST00000611278 TERF2IPQ9NYB0 399 aa11.8□□□□□ -0.52
ZNF248-208ENST00000611278 USP32Q8NFA0 1604 aa11.79□□□□□ -0.52
ZNF248-208ENST00000611278 SBNO1A3KN83 1393 aa11.79□□□□□ -0.52
ZNF248-208ENST00000611278 YTHDC1Q96MU7 727 aaKnown RBP11.78□□□□□ -0.52
ZNF248-208ENST00000611278 GLI3P10071 1580 aa11.78□□□□□ -0.52
ZNF248-208ENST00000611278 FMN2Q9NZ56 1722 aa11.78□□□□□ -0.52
ZNF248-208ENST00000611278 TMEM132EQ6IEE7 984 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms