RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 ANP32CO43423 234 aa30.79■■■□□ 2.52
UBE3C-209ENST00000611269 NWD1Q149M9 1564 aa30.78■■■□□ 2.52
UBE3C-209ENST00000611269 DISP3Q9P2K9 1392 aa30.76■■■□□ 2.52
UBE3C-209ENST00000611269 CCDC7Q96M83 1385 aa30.75■■■□□ 2.51
UBE3C-209ENST00000611269 TMF1P82094 1093 aa30.75■■■□□ 2.51
UBE3C-209ENST00000611269 SCAF1Q9H7N4 1312 aaKnown RBP30.75■■■□□ 2.51
UBE3C-209ENST00000611269 CCER2I3L3R5 266 aa30.74■■■□□ 2.51
UBE3C-209ENST00000611269 DMRT2Q9Y5R5 561 aa30.74■■■□□ 2.51
UBE3C-209ENST00000611269 KIF7Q2M1P5 1343 aa30.73■■■□□ 2.51
UBE3C-209ENST00000611269 MINK1Q8N4C8 1332 aaPredicted RBP30.73■■■□□ 2.51
UBE3C-209ENST00000611269 STRCP1A6NGW2 1772 aa30.73■■■□□ 2.51
UBE3C-209ENST00000611269 SLC24A1O60721 1099 aa30.71■■■□□ 2.51
UBE3C-209ENST00000611269 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.69■■■□□ 2.5
UBE3C-209ENST00000611269 TULP4Q9NRJ4 1543 aa30.68■■■□□ 2.5
UBE3C-209ENST00000611269 POLR3GLQ9BT43 218 aa30.68■■■□□ 2.5
UBE3C-209ENST00000611269 NKTRP30414 1462 aaKnown RBP30.67■■■□□ 2.5
UBE3C-209ENST00000611269 EVC2Q86UK5 1308 aa30.65■■■□□ 2.5
UBE3C-209ENST00000611269 ZNF335Q9H4Z2 1342 aaPredicted RBP30.64■■■□□ 2.49
UBE3C-209ENST00000611269 RBM33Q96EV2 1170 aaKnown RBP30.63■■■□□ 2.49
UBE3C-209ENST00000611269 CDCA8Q53HL2 280 aa30.63■■■□□ 2.49
UBE3C-209ENST00000611269 ADGRB2O60241 1585 aa30.61■■■□□ 2.49
UBE3C-209ENST00000611269 PROSER2Q86WR7 435 aaPredicted RBP30.61■■■□□ 2.49
UBE3C-209ENST00000611269 NALCNQ8IZF0 1738 aa30.59■■■□□ 2.49
UBE3C-209ENST00000611269 CDK19Q9BWU1 502 aa30.58■■■□□ 2.49
UBE3C-209ENST00000611269 CABP2Q9NPB3 220 aa30.57■■■□□ 2.48
UBE3C-209ENST00000611269 WASLO00401 505 aaPredicted RBP30.57■■■□□ 2.48
UBE3C-209ENST00000611269 SRPK2P78362 688 aaKnown RBP30.57■■■□□ 2.48
UBE3C-209ENST00000611269 ADGRL3Q9HAR2 1447 aa30.54■■■□□ 2.48
UBE3C-209ENST00000611269 TMEM94Q12767 1356 aa30.53■■■□□ 2.48
UBE3C-209ENST00000611269 C14orf37Q86TY3 774 aa30.53■■■□□ 2.48
UBE3C-209ENST00000611269 MYOM1P52179 1685 aa30.52■■■□□ 2.48
UBE3C-209ENST00000611269 PUS7Q96PZ0 661 aaKnown RBP30.52■■■□□ 2.48
UBE3C-209ENST00000611269 GTF3C3Q9Y5Q9 886 aa30.51■■■□□ 2.47
UBE3C-209ENST00000611269 LRRC7Q96NW7 1537 aa30.5■■■□□ 2.47
UBE3C-209ENST00000611269 XIRP1Q702N8 1843 aaKnown RBP30.49■■■□□ 2.47
UBE3C-209ENST00000611269 CDC42BPGQ6DT37 1551 aa30.49■■■□□ 2.47
UBE3C-209ENST00000611269 ATAD2Q6PL18 1390 aa30.47■■■□□ 2.47
UBE3C-209ENST00000611269 NCOA3Q9Y6Q9 1424 aa30.46■■■□□ 2.47
UBE3C-209ENST00000611269 FMN2Q9NZ56 1722 aa30.45■■■□□ 2.46
UBE3C-209ENST00000611269 NUTM2FA1L443 756 aa30.44■■■□□ 2.46
UBE3C-209ENST00000611269 TMC1Q8TDI8 760 aa30.44■■■□□ 2.46
UBE3C-209ENST00000611269 ATP7BP35670 1465 aa30.44■■■□□ 2.46
UBE3C-209ENST00000611269 PRR36Q9H6K5 1346 aa30.43■■■□□ 2.46
UBE3C-209ENST00000611269 NUDT16Q96DE0 195 aaKnown RBP30.42■■■□□ 2.46
UBE3C-209ENST00000611269 C19orf44Q9H6X5 657 aa30.42■■■□□ 2.46
UBE3C-209ENST00000611269 USP32Q8NFA0 1604 aa30.42■■■□□ 2.46
UBE3C-209ENST00000611269 SLC12A5Q9H2X9 1139 aa30.42■■■□□ 2.46
UBE3C-209ENST00000611269 LTBP4Q8N2S1 1624 aa30.41■■■□□ 2.46
UBE3C-209ENST00000611269 RGPD8O14715 1765 aaPredicted RBP30.4■■■□□ 2.46
UBE3C-209ENST00000611269 PRKRIP1Q9H875 184 aaPredicted RBP30.39■■■□□ 2.46
UBE3C-209ENST00000611269 PANK3Q9H999 370 aa30.38■■■□□ 2.45
UBE3C-209ENST00000611269 CCDC61Q9Y6R9 512 aa30.38■■■□□ 2.45
UBE3C-209ENST00000611269 TOPAZ1Q8N9V7 1692 aa30.37■■■□□ 2.45
UBE3C-209ENST00000611269 NINLQ9Y2I6 1382 aa30.37■■■□□ 2.45
UBE3C-209ENST00000611269 CABP1Q9NZU7 370 aa30.37■■■□□ 2.45
UBE3C-209ENST00000611269 PPIP5K1Q6PFW1 1433 aa30.37■■■□□ 2.45
UBE3C-209ENST00000611269 MSH6P52701 1360 aa30.36■■■□□ 2.45
UBE3C-209ENST00000611269 DCCP43146 1447 aa30.35■■■□□ 2.45
UBE3C-209ENST00000611269 ANKARQ7Z5J8 1434 aa30.35■■■□□ 2.45
UBE3C-209ENST00000611269 ITSN1Q15811 1721 aa30.34■■■□□ 2.45
UBE3C-209ENST00000611269 ATF3P18847 181 aa30.33■■■□□ 2.45
UBE3C-209ENST00000611269 CD163L1Q9NR16 1453 aa30.31■■■□□ 2.44
UBE3C-209ENST00000611269 ANKRD36BQ8N2N9 1353 aa30.3■■■□□ 2.44
UBE3C-209ENST00000611269 CADPS2Q86UW7 1296 aa30.29■■■□□ 2.44
UBE3C-209ENST00000611269 A0A1W2PP64 1363 aa30.28■■■□□ 2.44
UBE3C-209ENST00000611269 PER1O15534 1290 aaPredicted RBP30.27■■■□□ 2.44
UBE3C-209ENST00000611269 TERF2IPQ9NYB0 399 aa30.27■■■□□ 2.44
UBE3C-209ENST00000611269 MST1RQ04912 1400 aa30.26■■■□□ 2.44
UBE3C-209ENST00000611269 CARD14Q9BXL6 1004 aa30.26■■■□□ 2.43
UBE3C-209ENST00000611269 PLEKHG3A1L390 1219 aa30.25■■■□□ 2.43
UBE3C-209ENST00000611269 C1orf167Q5SNV9 1468 aa30.25■■■□□ 2.43
UBE3C-209ENST00000611269 PMFBP1Q8TBY8 1022 aa30.24■■■□□ 2.43
UBE3C-209ENST00000611269 HDGFL2Q7Z4V5 671 aaPredicted RBP30.23■■■□□ 2.43
UBE3C-209ENST00000611269 CPSF1Q10570 1443 aaKnown RBP30.23■■■□□ 2.43
UBE3C-209ENST00000611269 ESCO1Q5FWF5 840 aa30.23■■■□□ 2.43
UBE3C-209ENST00000611269 AKAP12Q02952 1782 aa30.23■■■□□ 2.43
UBE3C-209ENST00000611269 ACEP12821 1306 aa30.21■■■□□ 2.43
UBE3C-209ENST00000611269 NSD3Q9BZ95 1437 aa30.21■■■□□ 2.43
UBE3C-209ENST00000611269 ORAI2Q96SN7 254 aa30.21■■■□□ 2.43
UBE3C-209ENST00000611269 KNSTRNQ9Y448 316 aa30.21■■■□□ 2.43
UBE3C-209ENST00000611269 PHF8Q9UPP1 1060 aa30.19■■■□□ 2.42
UBE3C-209ENST00000611269 KTN1Q86UP2 1357 aaKnown RBP30.18■■■□□ 2.42
UBE3C-209ENST00000611269 MON2Q7Z3U7 1717 aa30.18■■■□□ 2.42
UBE3C-209ENST00000611269 POLR3AO14802 1390 aaPredicted RBP30.18■■■□□ 2.42
UBE3C-209ENST00000611269 NGDNQ8NEJ9 315 aaKnown RBP30.17■■■□□ 2.42
UBE3C-209ENST00000611269 CNGB1Q14028 1251 aaPredicted RBP30.16■■■□□ 2.42
UBE3C-209ENST00000611269 CCDC184Q52MB2 194 aa30.16■■■□□ 2.42
UBE3C-209ENST00000611269 ZNF692Q9BU19 519 aaPredicted RBP30.15■■■□□ 2.42
UBE3C-209ENST00000611269 SLAIN2Q9P270 581 aa30.14■■■□□ 2.42
UBE3C-209ENST00000611269 KIF1AQ12756 1690 aa30.14■■■□□ 2.41
UBE3C-209ENST00000611269 AMER1Q5JTC6 1135 aaPredicted RBP30.13■■■□□ 2.41
UBE3C-209ENST00000611269 MRS2Q9HD23 443 aa30.12■■■□□ 2.41
UBE3C-209ENST00000611269 USP6P35125 1406 aa30.12■■■□□ 2.41
UBE3C-209ENST00000611269 EDC4Q6P2E9 1401 aaKnown RBP30.12■■■□□ 2.41
UBE3C-209ENST00000611269 CC2D1BQ5T0F9 858 aaKnown RBP30.1■■■□□ 2.41
UBE3C-209ENST00000611269 NRKQ7Z2Y5 1582 aa30.1■■■□□ 2.41
UBE3C-209ENST00000611269 CGNL1Q0VF96 1302 aa30.09■■■□□ 2.41
UBE3C-209ENST00000611269 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.08■■■□□ 2.41
UBE3C-209ENST00000611269 FOXO3O43524 673 aa30.08■■■□□ 2.41
UBE3C-209ENST00000611269 NPC1L1Q9UHC9 1359 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms