RNA–Protein interactions for RNA: ENST00000611152.1

TUBGCP3-207, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 3

Gene TUBGCP3, Length 1,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-207ENST00000611152 YTHDC2Q9H6S0 1430 aaKnown RBP21.61■■□□□ 1.05
TUBGCP3-207ENST00000611152 NINLQ9Y2I6 1382 aa21.6■■□□□ 1.05
TUBGCP3-207ENST00000611152 NRXN3Q9Y4C0 1643 aa21.59■■□□□ 1.05
TUBGCP3-207ENST00000611152 EVC2Q86UK5 1308 aa21.59■■□□□ 1.05
TUBGCP3-207ENST00000611152 RIMS2Q9UQ26 1411 aa21.58■■□□□ 1.05
TUBGCP3-207ENST00000611152 THEMISQ8N1K5 641 aaPredicted RBP21.57■■□□□ 1.04
TUBGCP3-207ENST00000611152 LMTK3Q96Q04 1460 aa21.57■■□□□ 1.04
TUBGCP3-207ENST00000611152 NUTM2DQ5VT03 806 aaPredicted RBP21.55■■□□□ 1.04
TUBGCP3-207ENST00000611152 ANKRD36BQ8N2N9 1353 aa21.55■■□□□ 1.04
TUBGCP3-207ENST00000611152 NSD3Q9BZ95 1437 aa21.54■■□□□ 1.04
TUBGCP3-207ENST00000611152 SLIT1O75093 1534 aa21.54■■□□□ 1.04
TUBGCP3-207ENST00000611152 POLR3AO14802 1390 aaPredicted RBP21.54■■□□□ 1.04
TUBGCP3-207ENST00000611152 NSD2O96028 1365 aa21.54■■□□□ 1.04
TUBGCP3-207ENST00000611152 TMEM2Q9UHN6 1383 aa21.54■■□□□ 1.04
TUBGCP3-207ENST00000611152 BCANQ96GW7 911 aa21.53■■□□□ 1.04
TUBGCP3-207ENST00000611152 KNDC1Q76NI1 1749 aa21.52■■□□□ 1.04
TUBGCP3-207ENST00000611152 ARHGAP23Q9P227 1491 aa21.52■■□□□ 1.04
TUBGCP3-207ENST00000611152 SLC12A5Q9H2X9 1139 aa21.5■■□□□ 1.03
TUBGCP3-207ENST00000611152 ABCC11Q96J66 1382 aa21.5■■□□□ 1.03
TUBGCP3-207ENST00000611152 HDGFP51858 240 aaKnown RBP21.5■■□□□ 1.03
TUBGCP3-207ENST00000611152 AEBP2Q6ZN18 517 aaPredicted RBP21.5■■□□□ 1.03
TUBGCP3-207ENST00000611152 ADAMTS8Q9UP79 889 aa21.5■■□□□ 1.03
TUBGCP3-207ENST00000611152 SHPRHQ149N8 1683 aa21.49■■□□□ 1.03
TUBGCP3-207ENST00000611152 ATAD2Q6PL18 1390 aa21.49■■□□□ 1.03
TUBGCP3-207ENST00000611152 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.49■■□□□ 1.03
TUBGCP3-207ENST00000611152 PPP4R2Q9NY27 417 aa21.49■■□□□ 1.03
TUBGCP3-207ENST00000611152 EID1Q9Y6B2 187 aa21.48■■□□□ 1.03
TUBGCP3-207ENST00000611152 TECPR2O15040 1411 aa21.48■■□□□ 1.03
TUBGCP3-207ENST00000611152 ANKRD26Q9UPS8 1709 aa21.47■■□□□ 1.03
TUBGCP3-207ENST00000611152 MED14O60244 1454 aa21.47■■□□□ 1.03
TUBGCP3-207ENST00000611152 ZNF521Q96K83 1311 aa21.46■■□□□ 1.03
TUBGCP3-207ENST00000611152 CD163L1Q9NR16 1453 aa21.46■■□□□ 1.03
TUBGCP3-207ENST00000611152 SIRT1Q96EB6 747 aa21.45■■□□□ 1.02
TUBGCP3-207ENST00000611152 CGNL1Q0VF96 1302 aa21.44■■□□□ 1.02
TUBGCP3-207ENST00000611152 WDR43Q15061 677 aaKnown RBP eCLIP21.44■■□□□ 1.02
TUBGCP3-207ENST00000611152 ANKLE2Q86XL3 938 aa21.44■■□□□ 1.02
TUBGCP3-207ENST00000611152 CPS1P31327 1500 aa21.43■■□□□ 1.02
TUBGCP3-207ENST00000611152 HSPA2P54652 639 aa21.43■■□□□ 1.02
TUBGCP3-207ENST00000611152 TXNDC2Q86VQ3 553 aa21.43■■□□□ 1.02
TUBGCP3-207ENST00000611152 NGEFQ8N5V2 710 aa21.43■■□□□ 1.02
TUBGCP3-207ENST00000611152 PRAM1Q96QH2 718 aa21.43■■□□□ 1.02
TUBGCP3-207ENST00000611152 IRX6P78412 446 aaPredicted RBP21.42■■□□□ 1.02
TUBGCP3-207ENST00000611152 FAM135BQ49AJ0 1406 aa21.42■■□□□ 1.02
TUBGCP3-207ENST00000611152 TSHZ2Q9NRE2 1034 aa21.41■■□□□ 1.02
TUBGCP3-207ENST00000611152 A0A1W2PP64 1363 aa21.41■■□□□ 1.02
TUBGCP3-207ENST00000611152 PLEKHH1Q9ULM0 1364 aa21.41■■□□□ 1.02
TUBGCP3-207ENST00000611152 LTKP29376 864 aa21.4■■□□□ 1.02
TUBGCP3-207ENST00000611152 CABP2Q9NPB3 220 aa21.4■■□□□ 1.02
TUBGCP3-207ENST00000611152 STK26Q9P289 416 aa21.4■■□□□ 1.02
TUBGCP3-207ENST00000611152 PLEKHG1Q9ULL1 1385 aa21.4■■□□□ 1.02
TUBGCP3-207ENST00000611152 MORC1Q86VD1 984 aa21.38■■□□□ 1.01
TUBGCP3-207ENST00000611152 ATP7BP35670 1465 aa21.38■■□□□ 1.01
TUBGCP3-207ENST00000611152 POGKQ9P215 609 aa21.37■■□□□ 1.01
TUBGCP3-207ENST00000611152 METP08581 1390 aa21.36■■□□□ 1.01
TUBGCP3-207ENST00000611152 KIF20BQ96Q89 1820 aa21.35■■□□□ 1.01
TUBGCP3-207ENST00000611152 CDCA7LQ96GN5 454 aa21.35■■□□□ 1.01
TUBGCP3-207ENST00000611152 RCAN3Q9UKA8 241 aa21.35■■□□□ 1.01
TUBGCP3-207ENST00000611152 STRCQ7RTU9 1775 aa21.35■■□□□ 1.01
TUBGCP3-207ENST00000611152 NPHP4O75161 1426 aaPredicted RBP21.35■■□□□ 1.01
TUBGCP3-207ENST00000611152 ADAMTS13Q76LX8 1427 aa21.35■■□□□ 1.01
TUBGCP3-207ENST00000611152 MINK1Q8N4C8 1332 aaPredicted RBP21.34■■□□□ 1.01
TUBGCP3-207ENST00000611152 NCKAP5LQ9HCH0 1330 aa21.34■■□□□ 1.01
TUBGCP3-207ENST00000611152 ADGRB2O60241 1585 aa21.34■■□□□ 1.01
TUBGCP3-207ENST00000611152 DIP2AQ14689 1571 aa21.34■■□□□ 1.01
TUBGCP3-207ENST00000611152 RRP1P56182 461 aaKnown RBP21.34■■□□□ 1.01
TUBGCP3-207ENST00000611152 NCBP3Q53F19 620 aaKnown RBP21.34■■□□□ 1.01
TUBGCP3-207ENST00000611152 TRMT2AQ8IZ69 625 aaKnown RBP21.34■■□□□ 1.01
TUBGCP3-207ENST00000611152 TERF2IPQ9NYB0 399 aa21.34■■□□□ 1.01
TUBGCP3-207ENST00000611152 IQSEC2Q5JU85 1478 aa21.33■■□□□ 1.01
TUBGCP3-207ENST00000611152 SENP3-EIF4A1A0A087X0R7 540 aa21.33■■□□□ 1
TUBGCP3-207ENST00000611152 SRPK2P78362 688 aaKnown RBP21.33■■□□□ 1
TUBGCP3-207ENST00000611152 CDK19Q9BWU1 502 aa21.33■■□□□ 1
TUBGCP3-207ENST00000611152 SAFB2Q14151 953 aaKnown RBP eCLIP21.32■■□□□ 1
TUBGCP3-207ENST00000611152 COL3A1P02461 1466 aaPredicted RBP21.31■■□□□ 1
TUBGCP3-207ENST00000611152 SENP3Q9H4L4 574 aaPredicted RBP21.31■■□□□ 1
TUBGCP3-207ENST00000611152 CDC42BPGQ6DT37 1551 aa21.29■■□□□ 1
TUBGCP3-207ENST00000611152 CPSF1Q10570 1443 aaKnown RBP21.29■■□□□ 1
TUBGCP3-207ENST00000611152 DUSP27Q5VZP5 1158 aa21.29■■□□□ 1
TUBGCP3-207ENST00000611152 SALL2Q9Y467 1007 aaPredicted RBP21.29■■□□□ 1
TUBGCP3-207ENST00000611152 MON2Q7Z3U7 1717 aa21.27■■□□□ 1
TUBGCP3-207ENST00000611152 GOLGA2Q08379 1002 aa21.27■■□□□ 1
TUBGCP3-207ENST00000611152 SLFN5Q08AF3 891 aa21.27■■□□□ 1
TUBGCP3-207ENST00000611152 PHF23Q9BUL5 403 aaPredicted RBP21.27■■□□□ 1
TUBGCP3-207ENST00000611152 MTHFSP49914 203 aa21.26■□□□□ 0.99
TUBGCP3-207ENST00000611152 AKAP12Q02952 1782 aa21.26■□□□□ 0.99
TUBGCP3-207ENST00000611152 FYB1O15117 783 aa21.25■□□□□ 0.99
TUBGCP3-207ENST00000611152 HDGFL2Q7Z4V5 671 aaPredicted RBP21.25■□□□□ 0.99
TUBGCP3-207ENST00000611152 WAPLQ7Z5K2 1190 aa21.25■□□□□ 0.99
TUBGCP3-207ENST00000611152 CFAP53Q96M91 514 aa21.25■□□□□ 0.99
TUBGCP3-207ENST00000611152 SLC26A8Q96RN1 970 aa21.25■□□□□ 0.99
TUBGCP3-207ENST00000611152 WASLO00401 505 aaPredicted RBP21.24■□□□□ 0.99
TUBGCP3-207ENST00000611152 APAF1O14727 1248 aa21.24■□□□□ 0.99
TUBGCP3-207ENST00000611152 DMRT2Q9Y5R5 561 aa21.24■□□□□ 0.99
TUBGCP3-207ENST00000611152 TOPAZ1Q8N9V7 1692 aa21.24■□□□□ 0.99
TUBGCP3-207ENST00000611152 TBX22Q9Y458 520 aa21.24■□□□□ 0.99
TUBGCP3-207ENST00000611152 PNPLA6Q8IY17 1366 aa21.23■□□□□ 0.99
TUBGCP3-207ENST00000611152 B4GALNT3Q6L9W6 998 aa21.22■□□□□ 0.99
TUBGCP3-207ENST00000611152 CCDC146Q8IYE0 955 aa21.22■□□□□ 0.99
TUBGCP3-207ENST00000611152 RUNDC1Q96C34 613 aa21.22■□□□□ 0.99
TUBGCP3-207ENST00000611152 CABP1Q9NZU7 370 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms