RNA–Protein interactions for RNA: ENST00000611138.1

FAM228B-206, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 2

Gene FAM228B, Length 362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-206ENST00000611138 TECPR2O15040 1411 aa12.28□□□□□ -0.44
FAM228B-206ENST00000611138 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
FAM228B-206ENST00000611138 DLC1Q96QB1 1528 aa12.28□□□□□ -0.44
FAM228B-206ENST00000611138 ROBO2Q9HCK4 1378 aa12.28□□□□□ -0.44
FAM228B-206ENST00000611138 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.28□□□□□ -0.44
FAM228B-206ENST00000611138 RBM33Q96EV2 1170 aaKnown RBP12.27□□□□□ -0.45
FAM228B-206ENST00000611138 TRAK1Q9UPV9 953 aa12.27□□□□□ -0.45
FAM228B-206ENST00000611138 PROSER2Q86WR7 435 aaPredicted RBP12.26□□□□□ -0.45
FAM228B-206ENST00000611138 GPRASP1Q5JY77 1395 aa12.26□□□□□ -0.45
FAM228B-206ENST00000611138 ABCC11Q96J66 1382 aa12.26□□□□□ -0.45
FAM228B-206ENST00000611138 CARD11Q9BXL7 1154 aa12.25□□□□□ -0.45
FAM228B-206ENST00000611138 TMEM94Q12767 1356 aa12.25□□□□□ -0.45
FAM228B-206ENST00000611138 PLEKHH1Q9ULM0 1364 aa12.25□□□□□ -0.45
FAM228B-206ENST00000611138 FAM135BQ49AJ0 1406 aa12.23□□□□□ -0.45
FAM228B-206ENST00000611138 SAFB2Q14151 953 aaKnown RBP eCLIP12.23□□□□□ -0.45
FAM228B-206ENST00000611138 WAPLQ7Z5K2 1190 aa12.23□□□□□ -0.45
FAM228B-206ENST00000611138 PRAM1Q96QH2 718 aa12.23□□□□□ -0.45
FAM228B-206ENST00000611138 FMN2Q9NZ56 1722 aa12.23□□□□□ -0.45
FAM228B-206ENST00000611138 EIF3AQ14152 1382 aaKnown RBP12.22□□□□□ -0.45
FAM228B-206ENST00000611138 C14orf37Q86TY3 774 aa12.22□□□□□ -0.45
FAM228B-206ENST00000611138 PLSCR2Q9NRY7 297 aa12.22□□□□□ -0.45
FAM228B-206ENST00000611138 POGKQ9P215 609 aa12.22□□□□□ -0.45
FAM228B-206ENST00000611138 RGPD8O14715 1765 aaPredicted RBP12.22□□□□□ -0.45
FAM228B-206ENST00000611138 ADGRB2O60241 1585 aa12.22□□□□□ -0.45
FAM228B-206ENST00000611138 ADGRL3Q9HAR2 1447 aa12.21□□□□□ -0.45
FAM228B-206ENST00000611138 USP47Q96K76 1375 aa12.21□□□□□ -0.45
FAM228B-206ENST00000611138 CDC42BPGQ6DT37 1551 aa12.21□□□□□ -0.46
FAM228B-206ENST00000611138 ZEB1P37275 1124 aaPredicted RBP12.2□□□□□ -0.46
FAM228B-206ENST00000611138 IQSEC2Q5JU85 1478 aa12.2□□□□□ -0.46
FAM228B-206ENST00000611138 MSH6P52701 1360 aa12.19□□□□□ -0.46
FAM228B-206ENST00000611138 CENPJQ9HC77 1338 aaPredicted RBP12.19□□□□□ -0.46
FAM228B-206ENST00000611138 CERKQ8TCT0 537 aa12.19□□□□□ -0.46
FAM228B-206ENST00000611138 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
FAM228B-206ENST00000611138 MINK1Q8N4C8 1332 aaPredicted RBP12.18□□□□□ -0.46
FAM228B-206ENST00000611138 ITSN1Q15811 1721 aa12.18□□□□□ -0.46
FAM228B-206ENST00000611138 SIRT1Q96EB6 747 aa12.18□□□□□ -0.46
FAM228B-206ENST00000611138 NCOA3Q9Y6Q9 1424 aa12.18□□□□□ -0.46
FAM228B-206ENST00000611138 USP32Q8NFA0 1604 aa12.18□□□□□ -0.46
FAM228B-206ENST00000611138 TULP4Q9NRJ4 1543 aa12.17□□□□□ -0.46
FAM228B-206ENST00000611138 HIRIP3Q9BW71 556 aaPredicted RBP12.17□□□□□ -0.46
FAM228B-206ENST00000611138 HAX1O00165 279 aa12.16□□□□□ -0.46
FAM228B-206ENST00000611138 DCCP43146 1447 aa12.15□□□□□ -0.46
FAM228B-206ENST00000611138 ST20-MTHFSA0A0A6YYL1 179 aa12.15□□□□□ -0.46
FAM228B-206ENST00000611138 TOPAZ1Q8N9V7 1692 aa12.15□□□□□ -0.46
FAM228B-206ENST00000611138 ROBO1Q9Y6N7 1651 aa12.14□□□□□ -0.47
FAM228B-206ENST00000611138 ATF3P18847 181 aa12.14□□□□□ -0.47
FAM228B-206ENST00000611138 EIF4G2P78344 907 aaKnown RBP eCLIP12.14□□□□□ -0.47
FAM228B-206ENST00000611138 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
FAM228B-206ENST00000611138 C19orf44Q9H6X5 657 aa12.14□□□□□ -0.47
FAM228B-206ENST00000611138 NUTM2FA1L443 756 aa12.13□□□□□ -0.47
FAM228B-206ENST00000611138 HSPA5P11021 654 aaKnown RBP12.13□□□□□ -0.47
FAM228B-206ENST00000611138 MST1RQ04912 1400 aa12.12□□□□□ -0.47
FAM228B-206ENST00000611138 UBAP1LF5GYI3 381 aa12.12□□□□□ -0.47
FAM228B-206ENST00000611138 SBNO2Q9Y2G9 1366 aa12.12□□□□□ -0.47
FAM228B-206ENST00000611138 KIF1AQ12756 1690 aa12.11□□□□□ -0.47
FAM228B-206ENST00000611138 ATP7BP35670 1465 aa12.11□□□□□ -0.47
FAM228B-206ENST00000611138 CADPS2Q86UW7 1296 aa12.11□□□□□ -0.47
FAM228B-206ENST00000611138 MYOM1P52179 1685 aa12.1□□□□□ -0.47
FAM228B-206ENST00000611138 DISP3Q9P2K9 1392 aa12.1□□□□□ -0.47
FAM228B-206ENST00000611138 WASLO00401 505 aaPredicted RBP12.1□□□□□ -0.47
FAM228B-206ENST00000611138 TESK2Q96S53 571 aa12.1□□□□□ -0.47
FAM228B-206ENST00000611138 EVC2Q86UK5 1308 aa12.1□□□□□ -0.47
FAM228B-206ENST00000611138 C1orf167Q5SNV9 1468 aa12.09□□□□□ -0.47
FAM228B-206ENST00000611138 NHSL1Q5SYE7 1610 aa12.09□□□□□ -0.47
FAM228B-206ENST00000611138 TOM1O60784 492 aa12.09□□□□□ -0.47
FAM228B-206ENST00000611138 SRPK2P78362 688 aaKnown RBP12.09□□□□□ -0.47
FAM228B-206ENST00000611138 CDK19Q9BWU1 502 aa12.09□□□□□ -0.47
FAM228B-206ENST00000611138 ANKARQ7Z5J8 1434 aa12.09□□□□□ -0.47
FAM228B-206ENST00000611138 AKAP12Q02952 1782 aa12.08□□□□□ -0.48
FAM228B-206ENST00000611138 PIP4K2BP78356 416 aa12.08□□□□□ -0.48
FAM228B-206ENST00000611138 CABP2Q9NPB3 220 aa12.08□□□□□ -0.48
FAM228B-206ENST00000611138 PHLPP1O60346 1717 aa12.08□□□□□ -0.48
FAM228B-206ENST00000611138 PRR36Q9H6K5 1346 aa12.08□□□□□ -0.48
FAM228B-206ENST00000611138 SLAIN2Q9P270 581 aa12.07□□□□□ -0.48
FAM228B-206ENST00000611138 TMF1P82094 1093 aa12.06□□□□□ -0.48
FAM228B-206ENST00000611138 NUDT16Q96DE0 195 aaKnown RBP12.06□□□□□ -0.48
FAM228B-206ENST00000611138 PPIP5K1Q6PFW1 1433 aa12.05□□□□□ -0.48
FAM228B-206ENST00000611138 ESCO1Q5FWF5 840 aa12.05□□□□□ -0.48
FAM228B-206ENST00000611138 ORAI2Q96SN7 254 aa12.05□□□□□ -0.48
FAM228B-206ENST00000611138 POLR3GLQ9BT43 218 aa12.05□□□□□ -0.48
FAM228B-206ENST00000611138 MON2Q7Z3U7 1717 aa12.05□□□□□ -0.48
FAM228B-206ENST00000611138 AHDC1Q5TGY3 1603 aaPredicted RBP12.04□□□□□ -0.48
FAM228B-206ENST00000611138 SLC24A1O60721 1099 aa12.03□□□□□ -0.48
FAM228B-206ENST00000611138 BRINP3Q76B58 766 aa12.03□□□□□ -0.48
FAM228B-206ENST00000611138 PMFBP1Q8TBY8 1022 aa12.03□□□□□ -0.48
FAM228B-206ENST00000611138 ATAD2Q6PL18 1390 aa12.03□□□□□ -0.48
FAM228B-206ENST00000611138 TRPM3Q9HCF6 1732 aaPredicted RBP12.03□□□□□ -0.48
FAM228B-206ENST00000611138 COL16A1Q07092 1604 aaPredicted RBP12.02□□□□□ -0.49
FAM228B-206ENST00000611138 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.49
FAM228B-206ENST00000611138 NRKQ7Z2Y5 1582 aa12.01□□□□□ -0.49
FAM228B-206ENST00000611138 C11orf95C9JLR9 678 aaPredicted RBP12.01□□□□□ -0.49
FAM228B-206ENST00000611138 PIP4P2Q8N4L2 257 aa12.01□□□□□ -0.49
FAM228B-206ENST00000611138 TMC1Q8TDI8 760 aa12.01□□□□□ -0.49
FAM228B-206ENST00000611138 DDX17Q92841 729 aaKnown RBP12.01□□□□□ -0.49
FAM228B-206ENST00000611138 CCDC61Q9Y6R9 512 aa12.01□□□□□ -0.49
FAM228B-206ENST00000611138 CDCA8Q53HL2 280 aa12□□□□□ -0.49
FAM228B-206ENST00000611138 CABP1Q9NZU7 370 aa12□□□□□ -0.49
FAM228B-206ENST00000611138 KIF20BQ96Q89 1820 aa12□□□□□ -0.49
FAM228B-206ENST00000611138 XPCQ01831 940 aaPredicted RBP11.99□□□□□ -0.49
FAM228B-206ENST00000611138 NGDNQ8NEJ9 315 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms