RNA–Protein interactions for RNA: ENST00000610966.4

SVOP-205, Transcript of SV2 related protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVOP, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-205ENST00000610966 TSR1Q2NL82 804 aaKnown RBP11.57□□□□□ -0.56
SVOP-205ENST00000610966 CDCA7LQ96GN5 454 aa11.57□□□□□ -0.56
SVOP-205ENST00000610966 PRAM1Q96QH2 718 aa11.57□□□□□ -0.56
SVOP-205ENST00000610966 C22orf23Q9BZE7 217 aa11.57□□□□□ -0.56
SVOP-205ENST00000610966 C9orf84Q5VXU9 1444 aa11.57□□□□□ -0.56
SVOP-205ENST00000610966 TXNDC2Q86VQ3 553 aa11.57□□□□□ -0.56
SVOP-205ENST00000610966 EFCAB5A4FU69 1503 aa11.56□□□□□ -0.56
SVOP-205ENST00000610966 ABTB2Q8N961 1025 aa11.56□□□□□ -0.56
SVOP-205ENST00000610966 CEP89Q96ST8 783 aa11.56□□□□□ -0.56
SVOP-205ENST00000610966 PRKAR2BP31323 418 aa11.56□□□□□ -0.56
SVOP-205ENST00000610966 RAD21O60216 631 aa11.56□□□□□ -0.56
SVOP-205ENST00000610966 PRKCSHP14314 528 aaPredicted RBP11.56□□□□□ -0.56
SVOP-205ENST00000610966 PDE4CQ08493 712 aa11.56□□□□□ -0.56
SVOP-205ENST00000610966 GOLGA6L1Q8N7Z2 621 aa11.56□□□□□ -0.56
SVOP-205ENST00000610966 NEUROD6Q96NK8 337 aa11.56□□□□□ -0.56
SVOP-205ENST00000610966 TRIM34Q9BYJ4 488 aa11.56□□□□□ -0.56
SVOP-205ENST00000610966 KIAA1107Q9UPP5 1409 aa11.56□□□□□ -0.56
SVOP-205ENST00000610966 EHBP1L1Q8N3D4 1523 aa11.55□□□□□ -0.56
SVOP-205ENST00000610966 SMC3Q9UQE7 1217 aa11.55□□□□□ -0.56
SVOP-205ENST00000610966 NESP48681 1621 aa11.55□□□□□ -0.56
SVOP-205ENST00000610966 GAS2L2Q8NHY3 880 aa11.55□□□□□ -0.56
SVOP-205ENST00000610966 PRM3Q9NNZ6 103 aa11.55□□□□□ -0.56
SVOP-205ENST00000610966 GPRASP1Q5JY77 1395 aa11.55□□□□□ -0.56
SVOP-205ENST00000610966 VPS37CA5D8V6 355 aaPredicted RBP11.55□□□□□ -0.56
SVOP-205ENST00000610966 BICD2Q8TD16 824 aa11.55□□□□□ -0.56
SVOP-205ENST00000610966 TPM1P09493 284 aa11.55□□□□□ -0.56
SVOP-205ENST00000610966 NUCB2P80303 420 aa11.55□□□□□ -0.56
SVOP-205ENST00000610966 NFXL1Q6ZNB6 911 aa11.55□□□□□ -0.56
SVOP-205ENST00000610966 CCDC30Q5VVM6 783 aa11.54□□□□□ -0.56
SVOP-205ENST00000610966 TPM2P07951 284 aa11.54□□□□□ -0.56
SVOP-205ENST00000610966 MEX3CQ5U5Q3 659 aaKnown RBP11.54□□□□□ -0.56
SVOP-205ENST00000610966 MRC2Q9UBG0 1479 aa11.54□□□□□ -0.56
SVOP-205ENST00000610966 A0A0U1RQG5 324 aaPredicted RBP11.54□□□□□ -0.56
SVOP-205ENST00000610966 CDC45O75419 566 aa11.54□□□□□ -0.56
SVOP-205ENST00000610966 SLC12A5Q9H2X9 1139 aa11.54□□□□□ -0.56
SVOP-205ENST00000610966 PLEKHH2Q8IVE3 1493 aa11.54□□□□□ -0.56
SVOP-205ENST00000610966 ERICH2A1L162 156 aa11.54□□□□□ -0.56
SVOP-205ENST00000610966 EXOSC9Q06265 439 aaKnown RBP11.54□□□□□ -0.56
SVOP-205ENST00000610966 NBPF8Q3BBV2 869 aa11.54□□□□□ -0.56
SVOP-205ENST00000610966 GNAI3P08754 354 aa11.53□□□□□ -0.56
SVOP-205ENST00000610966 ESCO1Q5FWF5 840 aa11.53□□□□□ -0.56
SVOP-205ENST00000610966 TROQ12816 1431 aaPredicted RBP11.53□□□□□ -0.56
SVOP-205ENST00000610966 IFT140Q96RY7 1462 aa11.53□□□□□ -0.56
SVOP-205ENST00000610966 DHX16O60231 1041 aaKnown RBP11.53□□□□□ -0.56
SVOP-205ENST00000610966 SCAPERQ9BY12 1400 aa11.53□□□□□ -0.56
SVOP-205ENST00000610966 PRXQ9BXM0 1461 aa11.53□□□□□ -0.56
SVOP-205ENST00000610966 WASHC4Q2M389 1173 aa11.52□□□□□ -0.57
SVOP-205ENST00000610966 TOPBP1Q92547 1522 aa11.52□□□□□ -0.57
SVOP-205ENST00000610966 TWISTNBQ3B726 338 aaPredicted RBP11.52□□□□□ -0.57
SVOP-205ENST00000610966 PLEKHO1Q53GL0 409 aaPredicted RBP11.52□□□□□ -0.57
SVOP-205ENST00000610966 RALYLQ86SE5 291 aaKnown RBP11.52□□□□□ -0.57
SVOP-205ENST00000610966 CLASRPQ8N2M8 674 aaKnown RBP11.52□□□□□ -0.57
SVOP-205ENST00000610966 FBXW7Q969H0 707 aa11.52□□□□□ -0.57
SVOP-205ENST00000610966 FBXO3Q9UK99 471 aa11.52□□□□□ -0.57
SVOP-205ENST00000610966 CCDC47Q96A33 483 aaKnown RBP11.51□□□□□ -0.57
SVOP-205ENST00000610966 CDK19Q9BWU1 502 aa11.51□□□□□ -0.57
SVOP-205ENST00000610966 SURF6O75683 361 aaKnown RBP11.51□□□□□ -0.57
SVOP-205ENST00000610966 CNTROBQ8N137 903 aa11.51□□□□□ -0.57
SVOP-205ENST00000610966 HOOK1Q9UJC3 728 aaKnown RBP11.51□□□□□ -0.57
SVOP-205ENST00000610966 TOP2BQ02880 1626 aa11.51□□□□□ -0.57
SVOP-205ENST00000610966 RBM33Q96EV2 1170 aaKnown RBP11.51□□□□□ -0.57
SVOP-205ENST00000610966 SLC52A1Q9NWF4 448 aa11.51□□□□□ -0.57
SVOP-205ENST00000610966 CTDP1Q9Y5B0 961 aaPredicted RBP11.51□□□□□ -0.57
SVOP-205ENST00000610966 NINLQ9Y2I6 1382 aa11.51□□□□□ -0.57
SVOP-205ENST00000610966 CABP1Q9NZU7 370 aa11.5□□□□□ -0.57
SVOP-205ENST00000610966 POLA1P09884 1462 aaPredicted RBP11.5□□□□□ -0.57
SVOP-205ENST00000610966 PROSER2Q86WR7 435 aaPredicted RBP11.5□□□□□ -0.57
SVOP-205ENST00000610966 TCEAL9Q9UHQ7 104 aa11.5□□□□□ -0.57
SVOP-205ENST00000610966 CCAR2Q8N163 923 aaKnown RBP11.5□□□□□ -0.57
SVOP-205ENST00000610966 ZNF692Q9BU19 519 aaPredicted RBP11.5□□□□□ -0.57
SVOP-205ENST00000610966 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.49□□□□□ -0.57
SVOP-205ENST00000610966 ANKRD20A12PQ8NF67 263 aa11.49□□□□□ -0.57
SVOP-205ENST00000610966 HECW1Q76N89 1606 aa11.49□□□□□ -0.57
SVOP-205ENST00000610966 PDE3AQ14432 1141 aa11.49□□□□□ -0.57
SVOP-205ENST00000610966 SAFBQ15424 915 aaKnown RBP eCLIP11.49□□□□□ -0.57
SVOP-205ENST00000610966 FOSBP53539 338 aa11.49□□□□□ -0.57
SVOP-205ENST00000610966 FSD1Q9BTV5 496 aa11.49□□□□□ -0.57
SVOP-205ENST00000610966 THEMISQ8N1K5 641 aaPredicted RBP11.49□□□□□ -0.57
SVOP-205ENST00000610966 SULT6B1Q6IMI4 303 aa11.49□□□□□ -0.57
SVOP-205ENST00000610966 TSR2Q969E8 191 aaKnown RBP11.49□□□□□ -0.57
SVOP-205ENST00000610966 PCMTD1Q96MG8 357 aaPredicted RBP11.49□□□□□ -0.57
SVOP-205ENST00000610966 SASS6Q6UVJ0 657 aa11.48□□□□□ -0.57
SVOP-205ENST00000610966 SNAPC4Q5SXM2 1469 aa11.48□□□□□ -0.57
SVOP-205ENST00000610966 TIAM1Q13009 1591 aa11.48□□□□□ -0.57
SVOP-205ENST00000610966 PDZRN3Q9UPQ7 1066 aa11.48□□□□□ -0.57
SVOP-205ENST00000610966 PSMA5P28066 241 aa11.48□□□□□ -0.57
SVOP-205ENST00000610966 NOB1Q9ULX3 412 aaKnown RBP11.48□□□□□ -0.57
SVOP-205ENST00000610966 DAPK1P53355 1430 aa11.48□□□□□ -0.57
SVOP-205ENST00000610966 CCDC73Q6ZRK6 1079 aa11.48□□□□□ -0.57
SVOP-205ENST00000610966 SMG6Q86US8 1419 aaKnown RBP11.48□□□□□ -0.57
SVOP-205ENST00000610966 CCDC27Q2M243 656 aa11.48□□□□□ -0.57
SVOP-205ENST00000610966 IPO7O95373 1038 aaKnown RBP11.47□□□□□ -0.57
SVOP-205ENST00000610966 ZNF592Q92610 1267 aa11.47□□□□□ -0.57
SVOP-205ENST00000610966 C1orf115Q9H7X2 142 aa11.47□□□□□ -0.57
SVOP-205ENST00000610966 BCAR3O75815 825 aa11.47□□□□□ -0.57
SVOP-205ENST00000610966 GNAI2P04899 355 aa11.47□□□□□ -0.57
SVOP-205ENST00000610966 PNISRQ8TF01 805 aaKnown RBP11.47□□□□□ -0.57
SVOP-205ENST00000610966 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.47□□□□□ -0.57
SVOP-205ENST00000610966 GCC1Q96CN9 775 aa11.47□□□□□ -0.57
SVOP-205ENST00000610966 ERBINQ96RT1 1412 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms