RNA–Protein interactions for RNA: ENST00000608917.1

PACERR-201, PTGS2 antisense NFKB1 complex-mediated expression regulator RNA, humanhuman

BASIC

Gene PACERR, Length 825 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACERR-201ENST00000608917 DLC1Q96QB1 1528 aa13.16□□□□□ -0.3
PACERR-201ENST00000608917 SETD1AO15047 1707 aaKnown RBP13.16□□□□□ -0.3
PACERR-201ENST00000608917 NWD1Q149M9 1564 aa13.15□□□□□ -0.3
PACERR-201ENST00000608917 SAFB2Q14151 953 aaKnown RBP eCLIP13.15□□□□□ -0.3
PACERR-201ENST00000608917 NCBP3Q53F19 620 aaKnown RBP13.15□□□□□ -0.3
PACERR-201ENST00000608917 C19orf44Q9H6X5 657 aa13.15□□□□□ -0.3
PACERR-201ENST00000608917 CHD2O14647 1828 aaKnown RBP13.14□□□□□ -0.31
PACERR-201ENST00000608917 ST20-MTHFSA0A0A6YYL1 179 aa13.14□□□□□ -0.31
PACERR-201ENST00000608917 RBM33Q96EV2 1170 aaKnown RBP13.14□□□□□ -0.31
PACERR-201ENST00000608917 USP47Q96K76 1375 aa13.14□□□□□ -0.31
PACERR-201ENST00000608917 LRRC7Q96NW7 1537 aa13.13□□□□□ -0.31
PACERR-201ENST00000608917 LTBP4Q8N2S1 1624 aa13.13□□□□□ -0.31
PACERR-201ENST00000608917 PLEKHH1Q9ULM0 1364 aa13.13□□□□□ -0.31
PACERR-201ENST00000608917 XRN1Q8IZH2 1706 aaKnown RBP13.13□□□□□ -0.31
PACERR-201ENST00000608917 HSPA5P11021 654 aaKnown RBP13.12□□□□□ -0.31
PACERR-201ENST00000608917 CERKQ8TCT0 537 aa13.12□□□□□ -0.31
PACERR-201ENST00000608917 MINK1Q8N4C8 1332 aaPredicted RBP13.11□□□□□ -0.31
PACERR-201ENST00000608917 MSH6P52701 1360 aa13.1□□□□□ -0.31
PACERR-201ENST00000608917 ATF3P18847 181 aa13.1□□□□□ -0.31
PACERR-201ENST00000608917 TESK2Q96S53 571 aa13.1□□□□□ -0.31
PACERR-201ENST00000608917 SBNO2Q9Y2G9 1366 aa13.09□□□□□ -0.31
PACERR-201ENST00000608917 WASLO00401 505 aaPredicted RBP13.09□□□□□ -0.31
PACERR-201ENST00000608917 CADPS2Q86UW7 1296 aa13.09□□□□□ -0.31
PACERR-201ENST00000608917 HIRIP3Q9BW71 556 aaPredicted RBP13.09□□□□□ -0.31
PACERR-201ENST00000608917 RNF39Q9H2S5 420 aa13.09□□□□□ -0.31
PACERR-201ENST00000608917 ADGRL3Q9HAR2 1447 aa13.09□□□□□ -0.31
PACERR-201ENST00000608917 EVC2Q86UK5 1308 aa13.09□□□□□ -0.31
PACERR-201ENST00000608917 CDK19Q9BWU1 502 aa13.08□□□□□ -0.32
PACERR-201ENST00000608917 KNDC1Q76NI1 1749 aa13.08□□□□□ -0.32
PACERR-201ENST00000608917 STRCP1A6NGW2 1772 aa13.07□□□□□ -0.32
PACERR-201ENST00000608917 TMF1P82094 1093 aa13.07□□□□□ -0.32
PACERR-201ENST00000608917 CDCA8Q53HL2 280 aa13.07□□□□□ -0.32
PACERR-201ENST00000608917 PUS7Q96PZ0 661 aaKnown RBP13.07□□□□□ -0.32
PACERR-201ENST00000608917 DCCP43146 1447 aa13.06□□□□□ -0.32
PACERR-201ENST00000608917 IQSEC2Q5JU85 1478 aa13.06□□□□□ -0.32
PACERR-201ENST00000608917 TOM1O60784 492 aa13.06□□□□□ -0.32
PACERR-201ENST00000608917 SLAIN2Q9P270 581 aa13.06□□□□□ -0.32
PACERR-201ENST00000608917 SRPK2P78362 688 aaKnown RBP13.05□□□□□ -0.32
PACERR-201ENST00000608917 ARHGEF28Q8N1W1 1705 aaKnown RBP13.03□□□□□ -0.32
PACERR-201ENST00000608917 NUDT16Q96DE0 195 aaKnown RBP13.03□□□□□ -0.32
PACERR-201ENST00000608917 CABP2Q9NPB3 220 aa13.03□□□□□ -0.32
PACERR-201ENST00000608917 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.02□□□□□ -0.32
PACERR-201ENST00000608917 UBAP1LF5GYI3 381 aa13.02□□□□□ -0.33
PACERR-201ENST00000608917 CCDC61Q9Y6R9 512 aa13.02□□□□□ -0.33
PACERR-201ENST00000608917 NUTM2FA1L443 756 aa13.01□□□□□ -0.33
PACERR-201ENST00000608917 SOCS7O14512 581 aa13.01□□□□□ -0.33
PACERR-201ENST00000608917 ADGRB2O60241 1585 aa13□□□□□ -0.33
PACERR-201ENST00000608917 CDC42BPGQ6DT37 1551 aa13□□□□□ -0.33
PACERR-201ENST00000608917 ANKARQ7Z5J8 1434 aa13□□□□□ -0.33
PACERR-201ENST00000608917 ESCO1Q5FWF5 840 aa13□□□□□ -0.33
PACERR-201ENST00000608917 MST1RQ04912 1400 aa12.99□□□□□ -0.33
PACERR-201ENST00000608917 ATAD2Q6PL18 1390 aa12.99□□□□□ -0.33
PACERR-201ENST00000608917 DISP3Q9P2K9 1392 aa12.99□□□□□ -0.33
PACERR-201ENST00000608917 PRR36Q9H6K5 1346 aa12.99□□□□□ -0.33
PACERR-201ENST00000608917 C1orf167Q5SNV9 1468 aa12.98□□□□□ -0.33
PACERR-201ENST00000608917 PLEKHG3A1L390 1219 aa12.98□□□□□ -0.33
PACERR-201ENST00000608917 ORAI2Q96SN7 254 aa12.98□□□□□ -0.33
PACERR-201ENST00000608917 TULP4Q9NRJ4 1543 aa12.98□□□□□ -0.33
PACERR-201ENST00000608917 QRICH2Q9H0J4 1663 aa12.97□□□□□ -0.33
PACERR-201ENST00000608917 C11orf95C9JLR9 678 aaPredicted RBP12.97□□□□□ -0.33
PACERR-201ENST00000608917 CABP1Q9NZU7 370 aa12.97□□□□□ -0.33
PACERR-201ENST00000608917 PHF8Q9UPP1 1060 aa12.97□□□□□ -0.33
PACERR-201ENST00000608917 NALCNQ8IZF0 1738 aa12.96□□□□□ -0.33
PACERR-201ENST00000608917 PIP4K2BP78356 416 aa12.96□□□□□ -0.33
PACERR-201ENST00000608917 BRINP3Q76B58 766 aa12.96□□□□□ -0.33
PACERR-201ENST00000608917 TMC1Q8TDI8 760 aa12.96□□□□□ -0.33
PACERR-201ENST00000608917 XIRP1Q702N8 1843 aaKnown RBP12.95□□□□□ -0.34
PACERR-201ENST00000608917 KIF7Q2M1P5 1343 aa12.95□□□□□ -0.34
PACERR-201ENST00000608917 NGDNQ8NEJ9 315 aaKnown RBP12.95□□□□□ -0.34
PACERR-201ENST00000608917 PMFBP1Q8TBY8 1022 aa12.95□□□□□ -0.34
PACERR-201ENST00000608917 POLR3GLQ9BT43 218 aa12.95□□□□□ -0.34
PACERR-201ENST00000608917 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
PACERR-201ENST00000608917 ATP7BP35670 1465 aa12.94□□□□□ -0.34
PACERR-201ENST00000608917 ZNF316A6NFI3 1004 aaPredicted RBP12.94□□□□□ -0.34
PACERR-201ENST00000608917 ZNF692Q9BU19 519 aaPredicted RBP12.94□□□□□ -0.34
PACERR-201ENST00000608917 SLC12A5Q9H2X9 1139 aa12.94□□□□□ -0.34
PACERR-201ENST00000608917 TERF2IPQ9NYB0 399 aa12.94□□□□□ -0.34
PACERR-201ENST00000608917 WASHC2AQ641Q2 1341 aa12.93□□□□□ -0.34
PACERR-201ENST00000608917 FOXO3O43524 673 aa12.93□□□□□ -0.34
PACERR-201ENST00000608917 C1QBPQ07021 282 aaKnown RBP12.93□□□□□ -0.34
PACERR-201ENST00000608917 PPIP5K1Q6PFW1 1433 aa12.93□□□□□ -0.34
PACERR-201ENST00000608917 CCDC7Q96M83 1385 aa12.93□□□□□ -0.34
PACERR-201ENST00000608917 ACEP12821 1306 aa12.92□□□□□ -0.34
PACERR-201ENST00000608917 NPHP3Q7Z494 1330 aa12.92□□□□□ -0.34
PACERR-201ENST00000608917 PSME1Q06323 249 aa12.92□□□□□ -0.34
PACERR-201ENST00000608917 HDGFL2Q7Z4V5 671 aaPredicted RBP12.92□□□□□ -0.34
PACERR-201ENST00000608917 FMN2Q9NZ56 1722 aa12.92□□□□□ -0.34
PACERR-201ENST00000608917 ILDR2Q71H61 639 aa12.91□□□□□ -0.34
PACERR-201ENST00000608917 POLR3AO14802 1390 aaPredicted RBP12.91□□□□□ -0.34
PACERR-201ENST00000608917 NPM3O75607 178 aaKnown RBP12.9□□□□□ -0.34
PACERR-201ENST00000608917 KRT28Q7Z3Y7 464 aa12.9□□□□□ -0.34
PACERR-201ENST00000608917 PANK3Q9H999 370 aa12.88□□□□□ -0.35
PACERR-201ENST00000608917 BRD4O60885 1362 aaPredicted RBP12.88□□□□□ -0.35
PACERR-201ENST00000608917 USP32Q8NFA0 1604 aa12.88□□□□□ -0.35
PACERR-201ENST00000608917 CPSF1Q10570 1443 aaKnown RBP12.88□□□□□ -0.35
PACERR-201ENST00000608917 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
PACERR-201ENST00000608917 ANKRD36BQ8N2N9 1353 aa12.87□□□□□ -0.35
PACERR-201ENST00000608917 DDX17Q92841 729 aaKnown RBP12.87□□□□□ -0.35
PACERR-201ENST00000608917 LRRC59Q96AG4 307 aaKnown RBP12.87□□□□□ -0.35
PACERR-201ENST00000608917 KTN1Q86UP2 1357 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms