RNA–Protein interactions for RNA: ENST00000608623.1

LINC01278-202, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

Gene LINC01278, Length 5,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-202ENST00000608623 RIMBP3CA6NJZ7 1639 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 RIMBP3BA6NNM3 1639 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 RIMBP3Q9UFD9 1639 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 SMARCC1Q92922 1105 aaPredicted RBP4.72□□□□□ -1.65
LINC01278-202ENST00000608623 ST20-MTHFSA0A0A6YYL1 179 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 ZBTB7AO95365 584 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 STARD3NLO95772 234 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 MTHFSP49914 203 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 GJA3Q9Y6H8 435 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 MIA2Q96PC5 1412 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 TOP2BQ02880 1626 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 CALD1Q05682 793 aaKnown RBP4.72□□□□□ -1.65
LINC01278-202ENST00000608623 FAM182BQ5T319 152 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 MSL1Q68DK7 614 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 ZNF530Q6P9A1 599 aaPredicted RBP4.72□□□□□ -1.65
LINC01278-202ENST00000608623 CNKSR2Q8WXI2 1034 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 SIN3AQ96ST3 1273 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 CABP1Q9NZU7 370 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 CCNL1Q9UK58 526 aaPredicted RBP4.72□□□□□ -1.65
LINC01278-202ENST00000608623 CCDC61Q9Y6R9 512 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 EN1Q05925 392 aaPredicted RBP4.72□□□□□ -1.65
LINC01278-202ENST00000608623 TMOD2Q9NZR1 351 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 ATAD2Q6PL18 1390 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 JCADQ9P266 1359 aa4.72□□□□□ -1.65
LINC01278-202ENST00000608623 CEP170Q5SW79 1584 aa4.71□□□□□ -1.65
LINC01278-202ENST00000608623 RPGRIP1LQ68CZ1 1315 aa4.71□□□□□ -1.65
LINC01278-202ENST00000608623 RUSC2Q8N2Y8 1516 aa4.71□□□□□ -1.65
LINC01278-202ENST00000608623 GIGYF1O75420 1035 aaPredicted RBP4.71□□□□□ -1.65
LINC01278-202ENST00000608623 AIMP1Q12904 312 aaKnown RBP4.71□□□□□ -1.65
LINC01278-202ENST00000608623 FKBP8Q14318 412 aa4.71□□□□□ -1.65
LINC01278-202ENST00000608623 DDRGK1Q96HY6 314 aa4.71□□□□□ -1.65
LINC01278-202ENST00000608623 HDAC9Q9UKV0 1011 aa4.71□□□□□ -1.65
LINC01278-202ENST00000608623 ABT1Q9ULW3 272 aaKnown RBP4.71□□□□□ -1.65
LINC01278-202ENST00000608623 ST5P78524 1137 aa4.71□□□□□ -1.66
LINC01278-202ENST00000608623 AMOTL1Q8IY63 956 aa4.71□□□□□ -1.66
LINC01278-202ENST00000608623 DHX29Q7Z478 1369 aaKnown RBP4.71□□□□□ -1.66
LINC01278-202ENST00000608623 CDCA7Q9BWT1 371 aaPredicted RBP4.71□□□□□ -1.66
LINC01278-202ENST00000608623 CCDC87Q9NVE4 849 aa4.71□□□□□ -1.66
LINC01278-202ENST00000608623 RTCBQ9Y3I0 505 aaKnown RBP4.71□□□□□ -1.66
LINC01278-202ENST00000608623 CGNL1Q0VF96 1302 aa4.71□□□□□ -1.66
LINC01278-202ENST00000608623 ECM2O94769 699 aaPredicted RBP4.71□□□□□ -1.66
LINC01278-202ENST00000608623 SLC4A3P48751 1232 aa4.71□□□□□ -1.66
LINC01278-202ENST00000608623 LMOD3Q0VAK6 560 aa4.71□□□□□ -1.66
LINC01278-202ENST00000608623 MAPK8IP2Q13387 824 aaPredicted RBP4.71□□□□□ -1.66
LINC01278-202ENST00000608623 NECTIN2Q92692 538 aa4.71□□□□□ -1.66
LINC01278-202ENST00000608623 ORAI2Q96SN7 254 aa4.71□□□□□ -1.66
LINC01278-202ENST00000608623 HDAC5Q9UQL6 1122 aa4.71□□□□□ -1.66
LINC01278-202ENST00000608623 NPHP4O75161 1426 aaPredicted RBP4.7□□□□□ -1.66
LINC01278-202ENST00000608623 SETD5Q9C0A6 1442 aa4.7□□□□□ -1.66
LINC01278-202ENST00000608623 ROCK1Q13464 1354 aa4.7□□□□□ -1.66
LINC01278-202ENST00000608623 GRIN3BO60391 1043 aa4.7□□□□□ -1.66
LINC01278-202ENST00000608623 TCP11L2Q8N4U5 519 aa4.7□□□□□ -1.66
LINC01278-202ENST00000608623 GGNBP2Q9H3C7 697 aa4.7□□□□□ -1.66
LINC01278-202ENST00000608623 TBX22Q9Y458 520 aa4.7□□□□□ -1.66
LINC01278-202ENST00000608623 PLIN1O60240 522 aa4.7□□□□□ -1.66
LINC01278-202ENST00000608623 ATP6V1AP38606 617 aa4.7□□□□□ -1.66
LINC01278-202ENST00000608623 WDR78Q5VTH9 848 aa4.7□□□□□ -1.66
LINC01278-202ENST00000608623 FTSJ3Q8IY81 847 aaKnown RBP4.7□□□□□ -1.66
LINC01278-202ENST00000608623 A2MP01023 1474 aa4.7□□□□□ -1.66
LINC01278-202ENST00000608623 PLCH2O75038 1416 aa4.7□□□□□ -1.66
LINC01278-202ENST00000608623 VPS53Q5VIR6 699 aa4.7□□□□□ -1.66
LINC01278-202ENST00000608623 ERBINQ96RT1 1412 aa4.7□□□□□ -1.66
LINC01278-202ENST00000608623 DDX58O95786 925 aaKnown RBP4.7□□□□□ -1.66
LINC01278-202ENST00000608623 DDX10Q13206 875 aaKnown RBP4.7□□□□□ -1.66
LINC01278-202ENST00000608623 RBM26Q5T8P6 1007 aaKnown RBP4.7□□□□□ -1.66
LINC01278-202ENST00000608623 SLC4A10Q6U841 1118 aa4.7□□□□□ -1.66
LINC01278-202ENST00000608623 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.7□□□□□ -1.66
LINC01278-202ENST00000608623 NAP1L2Q9ULW6 460 aaPredicted RBP4.7□□□□□ -1.66
LINC01278-202ENST00000608623 C6orf229H3BNL8 230 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 UNC5CLQ8IV45 518 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 MRS2Q9HD23 443 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 ZFYVE16Q7Z3T8 1539 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 VPS8Q8N3P4 1428 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 CDK11BP21127 795 aaKnown RBP4.69□□□□□ -1.66
LINC01278-202ENST00000608623 FGD1P98174 961 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 ERICH6Q7L0X2 663 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 ZSCAN29Q8IWY8 852 aaPredicted RBP4.69□□□□□ -1.66
LINC01278-202ENST00000608623 STAC3Q96MF2 364 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 CDK13Q14004 1512 aaKnown RBP4.69□□□□□ -1.66
LINC01278-202ENST00000608623 FAM83GA6ND36 823 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 GNPATO15228 680 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 EIF6P56537 245 aaKnown RBP4.69□□□□□ -1.66
LINC01278-202ENST00000608623 TRAPPC3LQ5T215 181 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 RIC3Q7Z5B4 369 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 CCDC125Q86Z20 511 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 FLAD1Q8NFF5 587 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 TOMM22Q9NS69 142 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 SPATA31A6Q5VVP1 1343 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 USP47Q96K76 1375 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 NCOA2Q15596 1464 aa4.69□□□□□ -1.66
LINC01278-202ENST00000608623 CENPBP07199 599 aaPredicted RBP4.68□□□□□ -1.66
LINC01278-202ENST00000608623 IL2RBP14784 551 aa4.68□□□□□ -1.66
LINC01278-202ENST00000608623 RTN4Q9NQC3 1192 aaKnown RBP4.68□□□□□ -1.66
LINC01278-202ENST00000608623 NUP160Q12769 1436 aa4.68□□□□□ -1.66
LINC01278-202ENST00000608623 RRBP1Q9P2E9 1410 aaKnown RBP4.68□□□□□ -1.66
LINC01278-202ENST00000608623 FYCO1Q9BQS8 1478 aa4.68□□□□□ -1.66
LINC01278-202ENST00000608623 TCEAL9Q9UHQ7 104 aa4.68□□□□□ -1.66
LINC01278-202ENST00000608623 RIMS2Q9UQ26 1411 aa4.68□□□□□ -1.66
LINC01278-202ENST00000608623 ZCRB1Q8TBF4 217 aaKnown RBP4.68□□□□□ -1.66
LINC01278-202ENST00000608623 NEO1Q92859 1461 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms