RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 NKTRP30414 1462 aaKnown RBP8.25□□□□□ -1.09
HDDC2-205ENST00000608456 MAGI2Q86UL8 1455 aa8.25□□□□□ -1.09
HDDC2-205ENST00000608456 IQGAP3Q86VI3 1631 aa8.25□□□□□ -1.09
HDDC2-205ENST00000608456 SYNMO15061 1565 aa8.24□□□□□ -1.09
HDDC2-205ENST00000608456 PLXNC1O60486 1568 aa8.24□□□□□ -1.09
HDDC2-205ENST00000608456 PPP2R1AP30153 589 aa8.24□□□□□ -1.09
HDDC2-205ENST00000608456 JPH4Q96JJ6 628 aa8.24□□□□□ -1.09
HDDC2-205ENST00000608456 UPF2Q9HAU5 1272 aaKnown RBP8.24□□□□□ -1.09
HDDC2-205ENST00000608456 ADAMTS8Q9UP79 889 aa8.24□□□□□ -1.09
HDDC2-205ENST00000608456 KDM2AQ9Y2K7 1162 aa8.24□□□□□ -1.09
HDDC2-205ENST00000608456 A2MP01023 1474 aa8.24□□□□□ -1.09
HDDC2-205ENST00000608456 RNF17Q9BXT8 1623 aaKnown RBP8.23□□□□□ -1.09
HDDC2-205ENST00000608456 EIF5BO60841 1220 aaKnown RBP8.23□□□□□ -1.09
HDDC2-205ENST00000608456 CT47B1P0C2W7 299 aaPredicted RBP8.23□□□□□ -1.09
HDDC2-205ENST00000608456 PTMSP20962 102 aa8.23□□□□□ -1.09
HDDC2-205ENST00000608456 PDAP1Q13442 181 aaKnown RBP8.23□□□□□ -1.09
HDDC2-205ENST00000608456 BCL11BQ9C0K0 894 aaPredicted RBP8.23□□□□□ -1.09
HDDC2-205ENST00000608456 PLA2R1Q13018 1463 aa8.23□□□□□ -1.09
HDDC2-205ENST00000608456 WDR7Q9Y4E6 1490 aa8.23□□□□□ -1.09
HDDC2-205ENST00000608456 ASXL1Q8IXJ9 1541 aa8.23□□□□□ -1.09
HDDC2-205ENST00000608456 DUOX2Q9NRD8 1548 aa8.23□□□□□ -1.09
HDDC2-205ENST00000608456 KANK1Q14678 1352 aa8.22□□□□□ -1.09
HDDC2-205ENST00000608456 PLB1Q6P1J6 1458 aa8.22□□□□□ -1.09
HDDC2-205ENST00000608456 NKX1-1Q15270 411 aaPredicted RBP8.22□□□□□ -1.09
HDDC2-205ENST00000608456 GLIPR1L2Q4G1C9 344 aa8.22□□□□□ -1.09
HDDC2-205ENST00000608456 ZNF777Q9ULD5 760 aaPredicted RBP8.22□□□□□ -1.09
HDDC2-205ENST00000608456 SCAF11Q99590 1463 aaKnown RBP8.21□□□□□ -1.09
HDDC2-205ENST00000608456 KIAA1210Q9ULL0 1709 aa8.21□□□□□ -1.09
HDDC2-205ENST00000608456 PUS7Q96PZ0 661 aaKnown RBP8.21□□□□□ -1.1
HDDC2-205ENST00000608456 VIRMAQ69YN4 1812 aaKnown RBP8.21□□□□□ -1.1
HDDC2-205ENST00000608456 POLR3AO14802 1390 aaPredicted RBP8.21□□□□□ -1.1
HDDC2-205ENST00000608456 DISP3Q9P2K9 1392 aa8.21□□□□□ -1.1
HDDC2-205ENST00000608456 PLEKHH1Q9ULM0 1364 aa8.21□□□□□ -1.1
HDDC2-205ENST00000608456 PLIN1O60240 522 aa8.2□□□□□ -1.1
HDDC2-205ENST00000608456 CCDC27Q2M243 656 aa8.2□□□□□ -1.1
HDDC2-205ENST00000608456 NBPF1Q3BBV0 1214 aa8.2□□□□□ -1.1
HDDC2-205ENST00000608456 WDR63Q8IWG1 891 aa8.2□□□□□ -1.1
HDDC2-205ENST00000608456 STK24Q9Y6E0 443 aa8.2□□□□□ -1.1
HDDC2-205ENST00000608456 PREX2Q70Z35 1606 aa8.2□□□□□ -1.1
HDDC2-205ENST00000608456 SBNO2Q9Y2G9 1366 aa8.2□□□□□ -1.1
HDDC2-205ENST00000608456 ERCC6Q03468 1493 aa8.19□□□□□ -1.1
HDDC2-205ENST00000608456 GTPBP6O43824 516 aaPredicted RBP8.19□□□□□ -1.1
HDDC2-205ENST00000608456 FRAT2O75474 233 aaPredicted RBP8.19□□□□□ -1.1
HDDC2-205ENST00000608456 CC2D1BQ5T0F9 858 aaKnown RBP8.19□□□□□ -1.1
HDDC2-205ENST00000608456 CHMP7Q8WUX9 453 aaPredicted RBP8.19□□□□□ -1.1
HDDC2-205ENST00000608456 CLUAP1Q96AJ1 413 aa8.19□□□□□ -1.1
HDDC2-205ENST00000608456 KIF12Q96FN5 646 aa8.19□□□□□ -1.1
HDDC2-205ENST00000608456 ANTXR1Q9H6X2 564 aa8.19□□□□□ -1.1
HDDC2-205ENST00000608456 BRPF3Q9ULD4 1205 aa8.19□□□□□ -1.1
HDDC2-205ENST00000608456 USP19O94966 1318 aa8.19□□□□□ -1.1
HDDC2-205ENST00000608456 RTEL1-TNFRSF6BF6WH68 1400 aa8.19□□□□□ -1.1
HDDC2-205ENST00000608456 PTPRTO14522 1441 aa8.19□□□□□ -1.1
HDDC2-205ENST00000608456 FSD2A1L4K1 749 aa8.18□□□□□ -1.1
HDDC2-205ENST00000608456 CLCN1P35523 988 aa8.18□□□□□ -1.1
HDDC2-205ENST00000608456 C20orf194Q5TEA3 1177 aa8.18□□□□□ -1.1
HDDC2-205ENST00000608456 RWDD1Q9H446 243 aaPredicted RBP8.18□□□□□ -1.1
HDDC2-205ENST00000608456 IQGAP1P46940 1657 aa8.18□□□□□ -1.1
HDDC2-205ENST00000608456 CD44P16070 742 aaKnown RBP8.17□□□□□ -1.1
HDDC2-205ENST00000608456 MRE11P49959 708 aa8.17□□□□□ -1.1
HDDC2-205ENST00000608456 TBC1D32Q96NH3 1257 aa8.17□□□□□ -1.1
HDDC2-205ENST00000608456 PCDHB13Q9Y5F0 798 aa8.17□□□□□ -1.1
HDDC2-205ENST00000608456 C19orf67A6NJJ6 358 aa8.16□□□□□ -1.1
HDDC2-205ENST00000608456 PSEN1P49768 467 aa8.16□□□□□ -1.1
HDDC2-205ENST00000608456 HNRNPMP52272 730 aaKnown RBP eCLIP8.16□□□□□ -1.1
HDDC2-205ENST00000608456 SKOR2Q2VWA4 1001 aaPredicted RBP8.16□□□□□ -1.1
HDDC2-205ENST00000608456 TTC37Q6PGP7 1564 aa8.16□□□□□ -1.1
HDDC2-205ENST00000608456 SAMD9LQ8IVG5 1584 aa8.16□□□□□ -1.1
HDDC2-205ENST00000608456 CENPJQ9HC77 1338 aaPredicted RBP8.16□□□□□ -1.1
HDDC2-205ENST00000608456 CHMP5Q9NZZ3 219 aa8.16□□□□□ -1.1
HDDC2-205ENST00000608456 ZRANB1Q9UGI0 708 aa8.16□□□□□ -1.1
HDDC2-205ENST00000608456 GOLGA6L3A6NEY3 463 aa8.15□□□□□ -1.1
HDDC2-205ENST00000608456 DDX11L8A8MPP1 907 aa8.15□□□□□ -1.1
HDDC2-205ENST00000608456 MAP3K13O43283 966 aa8.15□□□□□ -1.1
HDDC2-205ENST00000608456 PCDHB8Q9UN66 801 aa8.15□□□□□ -1.1
HDDC2-205ENST00000608456 CDC42BPBQ9Y5S2 1711 aa8.15□□□□□ -1.11
HDDC2-205ENST00000608456 TRPM2O94759 1503 aa8.14□□□□□ -1.11
HDDC2-205ENST00000608456 ARAP3Q8WWN8 1544 aa8.14□□□□□ -1.11
HDDC2-205ENST00000608456 ARID3CA6NKF2 412 aa8.14□□□□□ -1.11
HDDC2-205ENST00000608456 RRP9O43818 475 aaKnown RBP8.14□□□□□ -1.11
HDDC2-205ENST00000608456 MCM4P33991 863 aa8.14□□□□□ -1.11
HDDC2-205ENST00000608456 IFNL1Q8IU54 200 aa8.14□□□□□ -1.11
HDDC2-205ENST00000608456 CHMP4BQ9H444 224 aaKnown RBP8.14□□□□□ -1.11
HDDC2-205ENST00000608456 MYO5CQ9NQX4 1742 aa8.14□□□□□ -1.11
HDDC2-205ENST00000608456 MADDQ8WXG6 1647 aa8.14□□□□□ -1.11
HDDC2-205ENST00000608456 ADGRL1O94910 1474 aa8.13□□□□□ -1.11
HDDC2-205ENST00000608456 KIF16BQ96L93 1317 aa8.13□□□□□ -1.11
HDDC2-205ENST00000608456 APAF1O14727 1248 aa8.13□□□□□ -1.11
HDDC2-205ENST00000608456 RGS3P49796 1198 aa8.13□□□□□ -1.11
HDDC2-205ENST00000608456 TERF1P54274 439 aa8.13□□□□□ -1.11
HDDC2-205ENST00000608456 CNGB1Q14028 1251 aaPredicted RBP8.13□□□□□ -1.11
HDDC2-205ENST00000608456 RGL3Q3MIN7 710 aa8.13□□□□□ -1.11
HDDC2-205ENST00000608456 WWC1Q8IX03 1113 aa8.13□□□□□ -1.11
HDDC2-205ENST00000608456 SNX21Q969T3 373 aa8.13□□□□□ -1.11
HDDC2-205ENST00000608456 RUNDC1Q96C34 613 aa8.13□□□□□ -1.11
HDDC2-205ENST00000608456 MYOM2P54296 1465 aa8.13□□□□□ -1.11
HDDC2-205ENST00000608456 NLRP1Q9C000 1473 aa8.13□□□□□ -1.11
HDDC2-205ENST00000608456 SPHKAPQ2M3C7 1700 aa8.12□□□□□ -1.11
HDDC2-205ENST00000608456 IGHDP01880 384 aa8.12□□□□□ -1.11
HDDC2-205ENST00000608456 SLC4A3P48751 1232 aa8.12□□□□□ -1.11
HDDC2-205ENST00000608456 RARSP54136 660 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms