RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 C6orf229H3BNL8 230 aa12.95□□□□□ -0.34
LINC00343-211ENST00000608426 ADH1BP00325 375 aa12.95□□□□□ -0.34
LINC00343-211ENST00000608426 GJA5P36382 358 aa12.95□□□□□ -0.34
LINC00343-211ENST00000608426 SKIV2LQ15477 1246 aaKnown RBP12.95□□□□□ -0.34
LINC00343-211ENST00000608426 SYMPKQ92797 1274 aaKnown RBP12.95□□□□□ -0.34
LINC00343-211ENST00000608426 THAP11Q96EK4 314 aa12.95□□□□□ -0.34
LINC00343-211ENST00000608426 BRICD5Q6PL45 260 aa12.94□□□□□ -0.34
LINC00343-211ENST00000608426 SALL2Q9Y467 1007 aaPredicted RBP12.94□□□□□ -0.34
LINC00343-211ENST00000608426 PCDHB15Q9Y5E8 787 aa12.94□□□□□ -0.34
LINC00343-211ENST00000608426 IFFO2Q5TF58 517 aa12.93□□□□□ -0.34
LINC00343-211ENST00000608426 MTMR2Q13614 643 aa12.9□□□□□ -0.34
LINC00343-211ENST00000608426 PROCA1Q8NCQ7 364 aaPredicted RBP12.9□□□□□ -0.34
LINC00343-211ENST00000608426 PCMTD1Q96MG8 357 aaPredicted RBP12.9□□□□□ -0.34
LINC00343-211ENST00000608426 USB1Q9BQ65 265 aaKnown RBP12.9□□□□□ -0.34
LINC00343-211ENST00000608426 ZBTB3Q9H5J0 574 aa12.9□□□□□ -0.34
LINC00343-211ENST00000608426 CABLES1Q8TDN4 633 aa12.89□□□□□ -0.35
LINC00343-211ENST00000608426 SLC6A16Q9GZN6 736 aa12.89□□□□□ -0.35
LINC00343-211ENST00000608426 NUTM2BA6NNL0 878 aaPredicted RBP12.88□□□□□ -0.35
LINC00343-211ENST00000608426 NUTM2EB1AL46 878 aaPredicted RBP12.88□□□□□ -0.35
LINC00343-211ENST00000608426 TUSC1Q2TAM9 212 aa12.88□□□□□ -0.35
LINC00343-211ENST00000608426 NUTM2DQ5VT03 806 aaPredicted RBP12.88□□□□□ -0.35
LINC00343-211ENST00000608426 RETREG3Q86VR2 466 aa12.88□□□□□ -0.35
LINC00343-211ENST00000608426 NUTM2AQ8IVF1 878 aaPredicted RBP12.88□□□□□ -0.35
LINC00343-211ENST00000608426 GOPCQ9HD26 462 aa12.88□□□□□ -0.35
LINC00343-211ENST00000608426 S1PR4O95977 384 aa12.87□□□□□ -0.35
LINC00343-211ENST00000608426 HRCP23327 699 aa12.87□□□□□ -0.35
LINC00343-211ENST00000608426 QPCTQ16769 361 aa12.87□□□□□ -0.35
LINC00343-211ENST00000608426 PRPF38BQ5VTL8 546 aaKnown RBP12.87□□□□□ -0.35
LINC00343-211ENST00000608426 FAM160A2Q8N612 972 aaPredicted RBP12.87□□□□□ -0.35
LINC00343-211ENST00000608426 GGCXP38435 758 aa12.86□□□□□ -0.35
LINC00343-211ENST00000608426 SPDYE5A6NIY4 337 aa12.85□□□□□ -0.35
LINC00343-211ENST00000608426 MSS51Q4VC12 460 aa12.85□□□□□ -0.35
LINC00343-211ENST00000608426 PPP1R18Q6NYC8 613 aa12.85□□□□□ -0.35
LINC00343-211ENST00000608426 PRDM9Q9NQV7 894 aa12.85□□□□□ -0.35
LINC00343-211ENST00000608426 A0A0G2JS52 829 aa12.84□□□□□ -0.35
LINC00343-211ENST00000608426 LILRB3O75022 631 aa12.84□□□□□ -0.35
LINC00343-211ENST00000608426 PRR7Q8TB68 274 aa12.83□□□□□ -0.36
LINC00343-211ENST00000608426 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00343-211ENST00000608426 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.83□□□□□ -0.36
LINC00343-211ENST00000608426 RTL5Q5HYW3 569 aaPredicted RBP12.81□□□□□ -0.36
LINC00343-211ENST00000608426 TSC1Q92574 1164 aa12.81□□□□□ -0.36
LINC00343-211ENST00000608426 PPEF1O14829 653 aaPredicted RBP12.8□□□□□ -0.36
LINC00343-211ENST00000608426 CFAP99D6REC4 459 aa12.79□□□□□ -0.36
LINC00343-211ENST00000608426 RNF223E7ERA6 249 aa12.79□□□□□ -0.36
LINC00343-211ENST00000608426 JUNDP17535 347 aa12.79□□□□□ -0.36
LINC00343-211ENST00000608426 TMEM132AQ24JP5 1023 aa12.78□□□□□ -0.36
LINC00343-211ENST00000608426 DXOO77932 396 aaKnown RBP12.77□□□□□ -0.37
LINC00343-211ENST00000608426 MMP16P51512 607 aa12.77□□□□□ -0.37
LINC00343-211ENST00000608426 FBXO31Q5XUX0 539 aaPredicted RBP12.77□□□□□ -0.37
LINC00343-211ENST00000608426 PPP2R2DQ66LE6 453 aa12.75□□□□□ -0.37
LINC00343-211ENST00000608426 FCF1Q9Y324 198 aaKnown RBP12.75□□□□□ -0.37
LINC00343-211ENST00000608426 ANKLE1Q8NAG6 615 aa12.74□□□□□ -0.37
LINC00343-211ENST00000608426 HELBQ8NG08 1087 aaPredicted RBP12.74□□□□□ -0.37
LINC00343-211ENST00000608426 RFC5P40937 340 aa12.73□□□□□ -0.37
LINC00343-211ENST00000608426 DESI1Q6ICB0 168 aa12.73□□□□□ -0.37
LINC00343-211ENST00000608426 CCDC24Q8N4L8 307 aa12.73□□□□□ -0.37
LINC00343-211ENST00000608426 NUDT12Q9BQG2 462 aa12.71□□□□□ -0.37
LINC00343-211ENST00000608426 AP1G2O75843 785 aa12.7□□□□□ -0.38
LINC00343-211ENST00000608426 PTPRNQ16849 979 aa12.69□□□□□ -0.38
LINC00343-211ENST00000608426 PLA2G2CQ5R387 149 aa12.68□□□□□ -0.38
LINC00343-211ENST00000608426 LYPD8Q6UX82 237 aa12.68□□□□□ -0.38
LINC00343-211ENST00000608426 PER1O15534 1290 aaPredicted RBP12.67□□□□□ -0.38
LINC00343-211ENST00000608426 CCNYL3P0C7X3 344 aa12.67□□□□□ -0.38
LINC00343-211ENST00000608426 CTDSPL2Q05D32 466 aa12.67□□□□□ -0.38
LINC00343-211ENST00000608426 TMEM259Q4ZIN3 620 aa12.65□□□□□ -0.38
LINC00343-211ENST00000608426 ZBTB24O43167 697 aaPredicted RBP12.64□□□□□ -0.39
LINC00343-211ENST00000608426 CTHP32929 405 aa12.64□□□□□ -0.39
LINC00343-211ENST00000608426 USP17L8P0C7I0 530 aa12.63□□□□□ -0.39
LINC00343-211ENST00000608426 PRKD2Q9BZL6 878 aa12.63□□□□□ -0.39
LINC00343-211ENST00000608426 LRRN4Q8WUT4 740 aa12.62□□□□□ -0.39
LINC00343-211ENST00000608426 EVA1BQ9NVM1 165 aa12.62□□□□□ -0.39
LINC00343-211ENST00000608426 SLC19A1P41440 591 aa12.61□□□□□ -0.39
LINC00343-211ENST00000608426 KCNH2Q12809 1159 aa12.61□□□□□ -0.39
LINC00343-211ENST00000608426 MAP10Q9P2G4 905 aa12.61□□□□□ -0.39
LINC00343-211ENST00000608426 RGS20O76081 388 aa12.6□□□□□ -0.39
LINC00343-211ENST00000608426 PTCRAQ6ISU1 281 aaPredicted RBP12.6□□□□□ -0.39
LINC00343-211ENST00000608426 LIAT1Q6ZQX7 453 aa12.6□□□□□ -0.39
LINC00343-211ENST00000608426 EMID1Q96A84 441 aaPredicted RBP12.6□□□□□ -0.39
LINC00343-211ENST00000608426 F12P00748 615 aaPredicted RBP12.59□□□□□ -0.39
LINC00343-211ENST00000608426 V9GY48 417 aaPredicted RBP12.58□□□□□ -0.4
LINC00343-211ENST00000608426 RPIAP49247 311 aa12.57□□□□□ -0.4
LINC00343-211ENST00000608426 UNC93B1Q9H1C4 597 aa12.57□□□□□ -0.4
LINC00343-211ENST00000608426 BANK1Q8NDB2 785 aa12.56□□□□□ -0.4
LINC00343-211ENST00000608426 CD2BP2O95400 341 aaKnown RBP12.55□□□□□ -0.4
LINC00343-211ENST00000608426 TRIM32Q13049 653 aa12.55□□□□□ -0.4
LINC00343-211ENST00000608426 HMX1Q9NP08 348 aaPredicted RBP12.55□□□□□ -0.4
LINC00343-211ENST00000608426 NR6A1Q15406 480 aa12.54□□□□□ -0.4
LINC00343-211ENST00000608426 SPRYD7Q5W111 196 aa12.54□□□□□ -0.4
LINC00343-211ENST00000608426 SNRKQ9NRH2 765 aa12.52□□□□□ -0.41
LINC00343-211ENST00000608426 LINC01559Q495D7 138 aa12.51□□□□□ -0.41
LINC00343-211ENST00000608426 ZNF697Q5TEC3 545 aa12.51□□□□□ -0.41
LINC00343-211ENST00000608426 ZNF598Q86UK7 904 aaKnown RBP12.5□□□□□ -0.41
LINC00343-211ENST00000608426 EPS8L1Q8TE68 723 aa12.5□□□□□ -0.41
LINC00343-211ENST00000608426 BAP1Q92560 729 aa12.5□□□□□ -0.41
LINC00343-211ENST00000608426 MTMR14Q8NCE2 650 aa12.48□□□□□ -0.41
LINC00343-211ENST00000608426 ARMC2Q8NEN0 867 aa12.48□□□□□ -0.41
LINC00343-211ENST00000608426 TRIM34Q9BYJ4 488 aa12.46□□□□□ -0.41
LINC00343-211ENST00000608426 APBB1O00213 710 aa12.45□□□□□ -0.42
LINC00343-211ENST00000608426 WNT7BP56706 349 aa12.45□□□□□ -0.42
LINC00343-211ENST00000608426 SH3BP2P78314 561 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms