RNA–Protein interactions for RNA: ENST00000607039.1

CTTNBP2NL-204, Transcript of CTTNBP2 N-terminal like, humanhuman

TSL 1 (best)

Gene CTTNBP2NL, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2NL-204ENST00000607039 DDX17Q92841 729 aaKnown RBP11.44□□□□□ -0.58
CTTNBP2NL-204ENST00000607039 UPF1Q92900 1129 aaKnown RBP eCLIP11.44□□□□□ -0.58
CTTNBP2NL-204ENST00000607039 LRRC59Q96AG4 307 aaKnown RBP11.44□□□□□ -0.58
CTTNBP2NL-204ENST00000607039 ADGRL3Q9HAR2 1447 aa11.43□□□□□ -0.58
CTTNBP2NL-204ENST00000607039 SETD1AO15047 1707 aaKnown RBP11.43□□□□□ -0.58
CTTNBP2NL-204ENST00000607039 SHPRHQ149N8 1683 aa11.43□□□□□ -0.58
CTTNBP2NL-204ENST00000607039 AFF2P51816 1311 aa11.43□□□□□ -0.58
CTTNBP2NL-204ENST00000607039 NAIPQ13075 1403 aa11.42□□□□□ -0.58
CTTNBP2NL-204ENST00000607039 NEXMIFQ5QGS0 1516 aa11.41□□□□□ -0.58
CTTNBP2NL-204ENST00000607039 SPHKAPQ2M3C7 1700 aa11.41□□□□□ -0.58
CTTNBP2NL-204ENST00000607039 RRBP1Q9P2E9 1410 aaKnown RBP11.41□□□□□ -0.58
CTTNBP2NL-204ENST00000607039 CLTCL1P53675 1640 aa11.41□□□□□ -0.58
CTTNBP2NL-204ENST00000607039 POLA2Q14181 598 aa11.4□□□□□ -0.58
CTTNBP2NL-204ENST00000607039 PNPLA6Q8IY17 1366 aa11.4□□□□□ -0.58
CTTNBP2NL-204ENST00000607039 VGFO15240 615 aaPredicted RBP11.39□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 C8orf37Q96NL8 207 aa11.39□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 ROBO2Q9HCK4 1378 aa11.39□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 C1orf167Q5SNV9 1468 aa11.39□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 CDK12Q9NYV4 1490 aaPredicted RBP11.39□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 PTCH1Q13635 1447 aa11.38□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 RBM42Q9BTD8 480 aaKnown RBP11.38□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 NHSL1Q5SYE7 1610 aa11.37□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 RPGRIP1LQ68CZ1 1315 aa11.37□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 ORAI2Q96SN7 254 aa11.37□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 QTRT2Q9H974 415 aaKnown RBP11.37□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 ADAMTS2O95450 1211 aa11.36□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 RBM6P78332 1123 aaKnown RBP11.36□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 HFM1A2PYH4 1435 aa11.35□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 NGLY1Q96IV0 654 aa11.35□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 NALCNQ8IZF0 1738 aa11.35□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 RGS12O14924 1447 aa11.35□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 PRAG1Q86YV5 1406 aa11.35□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 HRCP23327 699 aa11.34□□□□□ -0.59
CTTNBP2NL-204ENST00000607039 USP21Q9UK80 565 aa11.32□□□□□ -0.6
CTTNBP2NL-204ENST00000607039 ESCO1Q5FWF5 840 aa11.31□□□□□ -0.6
CTTNBP2NL-204ENST00000607039 FNBP4Q8N3X1 1017 aaPredicted RBP11.31□□□□□ -0.6
CTTNBP2NL-204ENST00000607039 LAMC1P11047 1609 aa11.31□□□□□ -0.6
CTTNBP2NL-204ENST00000607039 ADGRF5Q8IZF2 1346 aa11.3□□□□□ -0.6
CTTNBP2NL-204ENST00000607039 TRPC5Q9UL62 973 aaPredicted RBP11.3□□□□□ -0.6
CTTNBP2NL-204ENST00000607039 NPHP3Q7Z494 1330 aa11.3□□□□□ -0.6
CTTNBP2NL-204ENST00000607039 KIF1BO60333 1816 aa11.29□□□□□ -0.6
CTTNBP2NL-204ENST00000607039 RGL3Q3MIN7 710 aa11.29□□□□□ -0.6
CTTNBP2NL-204ENST00000607039 STK26Q9P289 416 aa11.29□□□□□ -0.6
CTTNBP2NL-204ENST00000607039 FOXO3O43524 673 aa11.28□□□□□ -0.6
CTTNBP2NL-204ENST00000607039 XPCQ01831 940 aaPredicted RBP11.28□□□□□ -0.6
CTTNBP2NL-204ENST00000607039 WAPLQ7Z5K2 1190 aa11.28□□□□□ -0.6
CTTNBP2NL-204ENST00000607039 CCDC144AA2RUR9 1427 aa11.28□□□□□ -0.6
CTTNBP2NL-204ENST00000607039 LRPPRCP42704 1394 aaKnown RBP11.27□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 ATAD2Q6PL18 1390 aa11.27□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 TECPR2O15040 1411 aa11.27□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 ATRNO75882 1429 aa11.27□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 SPATA31E1Q6ZUB1 1445 aa11.27□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 MYOM2P54296 1465 aa11.27□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 TMEM132EQ6IEE7 984 aa11.26□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 MPHOSPH9Q99550 1183 aa11.26□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 ANKRD30BQ9BXX2 1392 aa11.26□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 PLEKHH1Q9ULM0 1364 aa11.26□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 PXDNQ92626 1479 aa11.26□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 CDC42BPGQ6DT37 1551 aa11.26□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 SPDYE4A6NLX3 237 aa11.25□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 ABCC11Q96J66 1382 aa11.25□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 BCL9LQ86UU0 1499 aa11.25□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 COL22A1Q8NFW1 1626 aaPredicted RBP11.25□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 PPLO60437 1756 aa11.24□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 SRCAPQ6ZRS2 3230 aa11.24□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 PIK3C2GO75747 1445 aa11.24□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 GJD4Q96KN9 370 aaPredicted RBP11.23□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 SPATA31A3Q5VYP0 1347 aa11.22□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 YTHDC2Q9H6S0 1430 aaKnown RBP11.21□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 MKRN4PQ13434 485 aaPredicted RBP11.21□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 SIRT1Q96EB6 747 aa11.21□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 C14orf93Q9H972 538 aaKnown RBP11.21□□□□□ -0.61
CTTNBP2NL-204ENST00000607039 KRT28Q7Z3Y7 464 aa11.2□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 UNC5CLQ8IV45 518 aa11.2□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 ZEB1P37275 1124 aaPredicted RBP11.19□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 CCDC125Q86Z20 511 aa11.19□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 PHF8Q9UPP1 1060 aa11.19□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 CFAP70Q5T0N1 1121 aa11.19□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 ZRANB1Q9UGI0 708 aa11.19□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 EP400Q96L91 3159 aa11.18□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 SLIT2O94813 1529 aa11.18□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 DHX57Q6P158 1386 aaKnown RBP11.17□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 RALGAPBQ86X10 1494 aa11.17□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 NRXN1Q9ULB1 1477 aa11.17□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 PSME1Q06323 249 aa11.17□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 SAFB2Q14151 953 aaKnown RBP eCLIP11.17□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 CCER1Q8TC90 406 aaPredicted RBP11.17□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 CABLES1Q8TDN4 633 aa11.17□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 PRAM1Q96QH2 718 aa11.17□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 TNS3Q68CZ2 1445 aa11.16□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 HAP1P54257 671 aaPredicted RBP11.16□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 KNDC1Q76NI1 1749 aa11.16□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 IFT172Q9UG01 1749 aa11.16□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 ACIN1Q9UKV3 1341 aaKnown RBP11.15□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 PLEKHG5O94827 1062 aa11.15□□□□□ -0.62
CTTNBP2NL-204ENST00000607039 PLCB2Q00722 1185 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms