RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 WAPLQ7Z5K2 1190 aa36.1■■■■□ 3.37
SNX5-219ENST00000606602 LRPPRCP42704 1394 aaKnown RBP36.1■■■■□ 3.37
SNX5-219ENST00000606602 ESCO1Q5FWF5 840 aa36.09■■■■□ 3.37
SNX5-219ENST00000606602 ADAMTS2O95450 1211 aa36.08■■■■□ 3.37
SNX5-219ENST00000606602 TECPR2O15040 1411 aa36.08■■■■□ 3.37
SNX5-219ENST00000606602 PIK3C2GO75747 1445 aa36.07■■■■□ 3.36
SNX5-219ENST00000606602 CDC42BPGQ6DT37 1551 aa36.06■■■■□ 3.36
SNX5-219ENST00000606602 IFT172Q9UG01 1749 aa36.06■■■■□ 3.36
SNX5-219ENST00000606602 ABCC11Q96J66 1382 aa36.06■■■■□ 3.36
SNX5-219ENST00000606602 NGLY1Q96IV0 654 aa36.05■■■■□ 3.36
SNX5-219ENST00000606602 QTRT2Q9H974 415 aaKnown RBP36.04■■■■□ 3.36
SNX5-219ENST00000606602 NPHP3Q7Z494 1330 aa36.02■■■■□ 3.36
SNX5-219ENST00000606602 CDK12Q9NYV4 1490 aaPredicted RBP36.01■■■■□ 3.36
SNX5-219ENST00000606602 NUTM2FA1L443 756 aa36.01■■■■□ 3.36
SNX5-219ENST00000606602 PLEKHH1Q9ULM0 1364 aa36.01■■■■□ 3.35
SNX5-219ENST00000606602 UPF1Q92900 1129 aaKnown RBP eCLIP36■■■■□ 3.35
SNX5-219ENST00000606602 YTHDC2Q9H6S0 1430 aaKnown RBP35.99■■■■□ 3.35
SNX5-219ENST00000606602 FOXO3O43524 673 aa35.98■■■■□ 3.35
SNX5-219ENST00000606602 RAB3GAP2Q9H2M9 1393 aa35.98■■■■□ 3.35
SNX5-219ENST00000606602 RBM6P78332 1123 aaKnown RBP35.97■■■■□ 3.35
SNX5-219ENST00000606602 C14orf93Q9H972 538 aaKnown RBP35.97■■■■□ 3.35
SNX5-219ENST00000606602 XPCQ01831 940 aaPredicted RBP35.95■■■■□ 3.35
SNX5-219ENST00000606602 CFAP70Q5T0N1 1121 aa35.93■■■■□ 3.34
SNX5-219ENST00000606602 KNDC1Q76NI1 1749 aa35.93■■■■□ 3.34
SNX5-219ENST00000606602 PXDNQ92626 1479 aa35.92■■■■□ 3.34
SNX5-219ENST00000606602 SIRT1Q96EB6 747 aa35.91■■■■□ 3.34
SNX5-219ENST00000606602 USP21Q9UK80 565 aa35.91■■■■□ 3.34
SNX5-219ENST00000606602 NRXN1Q9ULB1 1477 aa35.9■■■■□ 3.34
SNX5-219ENST00000606602 DHX57Q6P158 1386 aaKnown RBP35.89■■■■□ 3.34
SNX5-219ENST00000606602 MYOM2P54296 1465 aa35.89■■■■□ 3.34
SNX5-219ENST00000606602 RGS12O14924 1447 aa35.89■■■■□ 3.34
SNX5-219ENST00000606602 COL22A1Q8NFW1 1626 aaPredicted RBP35.87■■■■□ 3.33
SNX5-219ENST00000606602 FNBP4Q8N3X1 1017 aaPredicted RBP35.86■■■■□ 3.33
SNX5-219ENST00000606602 TRPC5Q9UL62 973 aaPredicted RBP35.84■■■■□ 3.33
SNX5-219ENST00000606602 FMN2Q9NZ56 1722 aa35.82■■■■□ 3.32
SNX5-219ENST00000606602 SAFB2Q14151 953 aaKnown RBP eCLIP35.81■■■■□ 3.32
SNX5-219ENST00000606602 PRAM1Q96QH2 718 aa35.81■■■■□ 3.32
SNX5-219ENST00000606602 KRT28Q7Z3Y7 464 aa35.78■■■■□ 3.32
SNX5-219ENST00000606602 SPATA31A3Q5VYP0 1347 aa35.77■■■■□ 3.32
SNX5-219ENST00000606602 POGKQ9P215 609 aa35.76■■■■□ 3.32
SNX5-219ENST00000606602 PHF8Q9UPP1 1060 aa35.75■■■■□ 3.31
SNX5-219ENST00000606602 KIF1AQ12756 1690 aa35.74■■■■□ 3.31
SNX5-219ENST00000606602 ATRNO75882 1429 aa35.74■■■■□ 3.31
SNX5-219ENST00000606602 KDM2AQ9Y2K7 1162 aa35.73■■■■□ 3.31
SNX5-219ENST00000606602 BCL9LQ86UU0 1499 aa35.7■■■■□ 3.31
SNX5-219ENST00000606602 DCAF11Q8TEB1 546 aa35.7■■■■□ 3.31
SNX5-219ENST00000606602 PSME1Q06323 249 aa35.69■■■■□ 3.3
SNX5-219ENST00000606602 DLC1Q96QB1 1528 aa35.68■■■■□ 3.3
SNX5-219ENST00000606602 TRAK1Q9UPV9 953 aa35.68■■■■□ 3.3
SNX5-219ENST00000606602 HRCP23327 699 aa35.67■■■■□ 3.3
SNX5-219ENST00000606602 ATAD2Q6PL18 1390 aa35.65■■■■□ 3.3
SNX5-219ENST00000606602 ADGRB1O14514 1584 aa35.65■■■■□ 3.3
SNX5-219ENST00000606602 HAP1P54257 671 aaPredicted RBP35.63■■■■□ 3.29
SNX5-219ENST00000606602 TNS3Q68CZ2 1445 aa35.63■■■■□ 3.29
SNX5-219ENST00000606602 MARF1Q9Y4F3 1742 aaKnown RBP35.63■■■■□ 3.29
SNX5-219ENST00000606602 GJD4Q96KN9 370 aaPredicted RBP35.62■■■■□ 3.29
SNX5-219ENST00000606602 HIRIP3Q9BW71 556 aaPredicted RBP35.62■■■■□ 3.29
SNX5-219ENST00000606602 RGPD8O14715 1765 aaPredicted RBP35.61■■■■□ 3.29
SNX5-219ENST00000606602 PLEKHG5O94827 1062 aa35.61■■■■□ 3.29
SNX5-219ENST00000606602 PMFBP1Q8TBY8 1022 aa35.61■■■■□ 3.29
SNX5-219ENST00000606602 STAC3Q96MF2 364 aa35.61■■■■□ 3.29
SNX5-219ENST00000606602 ANKARQ7Z5J8 1434 aa35.6■■■■□ 3.29
SNX5-219ENST00000606602 LMOD2Q6P5Q4 547 aa35.6■■■■□ 3.29
SNX5-219ENST00000606602 UNC5CLQ8IV45 518 aa35.59■■■■□ 3.29
SNX5-219ENST00000606602 CABLES1Q8TDN4 633 aa35.59■■■■□ 3.29
SNX5-219ENST00000606602 SBNO1A3KN83 1393 aa35.59■■■■□ 3.29
SNX5-219ENST00000606602 MINK1Q8N4C8 1332 aaPredicted RBP35.58■■■■□ 3.29
SNX5-219ENST00000606602 SLIT2O94813 1529 aa35.56■■■■□ 3.28
SNX5-219ENST00000606602 ADGRB2O60241 1585 aa35.55■■■■□ 3.28
SNX5-219ENST00000606602 ARHGEF10O15013 1369 aa35.54■■■■□ 3.28
SNX5-219ENST00000606602 USP32Q8NFA0 1604 aa35.54■■■■□ 3.28
SNX5-219ENST00000606602 EIF3AQ14152 1382 aaKnown RBP35.51■■■■□ 3.28
SNX5-219ENST00000606602 WASLO00401 505 aaPredicted RBP35.5■■■■□ 3.27
SNX5-219ENST00000606602 PRR36Q9H6K5 1346 aa35.49■■■■□ 3.27
SNX5-219ENST00000606602 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.49■■■■□ 3.27
SNX5-219ENST00000606602 RALGAPBQ86X10 1494 aa35.48■■■■□ 3.27
SNX5-219ENST00000606602 GPRASP1Q5JY77 1395 aa35.47■■■■□ 3.27
SNX5-219ENST00000606602 TULP4Q9NRJ4 1543 aa35.45■■■■□ 3.27
SNX5-219ENST00000606602 GLI3P10071 1580 aa35.43■■■■□ 3.26
SNX5-219ENST00000606602 VPS72Q15906 364 aa35.42■■■■□ 3.26
SNX5-219ENST00000606602 NGDNQ8NEJ9 315 aaKnown RBP35.41■■■■□ 3.26
SNX5-219ENST00000606602 CCDC9Q9Y3X0 531 aaKnown RBP35.41■■■■□ 3.26
SNX5-219ENST00000606602 FAM83GA6ND36 823 aa35.4■■■■□ 3.26
SNX5-219ENST00000606602 CCDC125Q86Z20 511 aa35.4■■■■□ 3.26
SNX5-219ENST00000606602 EP400Q96L91 3159 aa35.38■■■■□ 3.25
SNX5-219ENST00000606602 SEPT12Q8IYM1 358 aa35.36■■■■□ 3.25
SNX5-219ENST00000606602 ABCA3Q99758 1704 aa35.36■■■■□ 3.25
SNX5-219ENST00000606602 TRPM3Q9HCF6 1732 aaPredicted RBP35.35■■■■□ 3.25
SNX5-219ENST00000606602 PAK3O75914 559 aaPredicted RBP35.35■■■■□ 3.25
SNX5-219ENST00000606602 PLCH1Q4KWH8 1693 aa35.34■■■■□ 3.25
SNX5-219ENST00000606602 NUDT16Q96DE0 195 aaKnown RBP35.34■■■■□ 3.25
SNX5-219ENST00000606602 ARHGEF28Q8N1W1 1705 aaKnown RBP35.32■■■■□ 3.25
SNX5-219ENST00000606602 NWD2Q9ULI1 1742 aa35.32■■■■□ 3.24
SNX5-219ENST00000606602 CDK19Q9BWU1 502 aa35.3■■■■□ 3.24
SNX5-219ENST00000606602 BTG4Q9NY30 223 aa35.3■■■■□ 3.24
SNX5-219ENST00000606602 ALS2Q96Q42 1657 aa35.3■■■■□ 3.24
SNX5-219ENST00000606602 ATP7BP35670 1465 aa35.29■■■■□ 3.24
SNX5-219ENST00000606602 ONECUT3O60422 494 aaPredicted RBP35.29■■■■□ 3.24
SNX5-219ENST00000606602 ZRANB1Q9UGI0 708 aa35.27■■■■□ 3.24
SNX5-219ENST00000606602 NBPF1Q3BBV0 1214 aa35.25■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms