RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 HSPA5P11021 654 aaKnown RBP10.85□□□□□ -0.67
MSH6-211ENST00000606499 ADRA2BP18089 450 aa10.85□□□□□ -0.67
MSH6-211ENST00000606499 PROSER2Q86WR7 435 aaPredicted RBP10.85□□□□□ -0.67
MSH6-211ENST00000606499 POGKQ9P215 609 aa10.85□□□□□ -0.67
MSH6-211ENST00000606499 TMEM94Q12767 1356 aa10.85□□□□□ -0.67
MSH6-211ENST00000606499 ADGRL3Q9HAR2 1447 aa10.84□□□□□ -0.67
MSH6-211ENST00000606499 ST20-MTHFSA0A0A6YYL1 179 aa10.84□□□□□ -0.67
MSH6-211ENST00000606499 EIF4G2P78344 907 aaKnown RBP eCLIP10.84□□□□□ -0.67
MSH6-211ENST00000606499 HIRIP3Q9BW71 556 aaPredicted RBP10.84□□□□□ -0.67
MSH6-211ENST00000606499 MINK1Q8N4C8 1332 aaPredicted RBP10.84□□□□□ -0.67
MSH6-211ENST00000606499 SIRT1Q96EB6 747 aa10.83□□□□□ -0.68
MSH6-211ENST00000606499 USP32Q8NFA0 1604 aa10.83□□□□□ -0.68
MSH6-211ENST00000606499 RGPD8O14715 1765 aaPredicted RBP10.82□□□□□ -0.68
MSH6-211ENST00000606499 SBNO2Q9Y2G9 1366 aa10.82□□□□□ -0.68
MSH6-211ENST00000606499 MYOM1P52179 1685 aa10.82□□□□□ -0.68
MSH6-211ENST00000606499 TOPAZ1Q8N9V7 1692 aa10.82□□□□□ -0.68
MSH6-211ENST00000606499 DISP3Q9P2K9 1392 aa10.81□□□□□ -0.68
MSH6-211ENST00000606499 C14orf37Q86TY3 774 aa10.81□□□□□ -0.68
MSH6-211ENST00000606499 TESK2Q96S53 571 aa10.81□□□□□ -0.68
MSH6-211ENST00000606499 NCOA3Q9Y6Q9 1424 aa10.81□□□□□ -0.68
MSH6-211ENST00000606499 ITSN1Q15811 1721 aa10.81□□□□□ -0.68
MSH6-211ENST00000606499 MSH6P52701 1360 aa10.79□□□□□ -0.68
MSH6-211ENST00000606499 DCCP43146 1447 aa10.79□□□□□ -0.68
MSH6-211ENST00000606499 ATP7BP35670 1465 aa10.79□□□□□ -0.68
MSH6-211ENST00000606499 IQSEC2Q5JU85 1478 aa10.77□□□□□ -0.69
MSH6-211ENST00000606499 MST1RQ04912 1400 aa10.76□□□□□ -0.69
MSH6-211ENST00000606499 NUTM2FA1L443 756 aa10.76□□□□□ -0.69
MSH6-211ENST00000606499 WASLO00401 505 aaPredicted RBP10.76□□□□□ -0.69
MSH6-211ENST00000606499 C19orf44Q9H6X5 657 aa10.76□□□□□ -0.69
MSH6-211ENST00000606499 EVC2Q86UK5 1308 aa10.76□□□□□ -0.69
MSH6-211ENST00000606499 C11orf95C9JLR9 678 aaPredicted RBP10.75□□□□□ -0.69
MSH6-211ENST00000606499 SRPK2P78362 688 aaKnown RBP10.75□□□□□ -0.69
MSH6-211ENST00000606499 TMF1P82094 1093 aa10.75□□□□□ -0.69
MSH6-211ENST00000606499 CDK19Q9BWU1 502 aa10.75□□□□□ -0.69
MSH6-211ENST00000606499 CABP2Q9NPB3 220 aa10.75□□□□□ -0.69
MSH6-211ENST00000606499 PRR36Q9H6K5 1346 aa10.75□□□□□ -0.69
MSH6-211ENST00000606499 KIF1AQ12756 1690 aa10.75□□□□□ -0.69
MSH6-211ENST00000606499 ROBO1Q9Y6N7 1651 aa10.75□□□□□ -0.69
MSH6-211ENST00000606499 ANKARQ7Z5J8 1434 aa10.75□□□□□ -0.69
MSH6-211ENST00000606499 C1orf167Q5SNV9 1468 aa10.74□□□□□ -0.69
MSH6-211ENST00000606499 ATF3P18847 181 aa10.74□□□□□ -0.69
MSH6-211ENST00000606499 CERKQ8TCT0 537 aa10.74□□□□□ -0.69
MSH6-211ENST00000606499 AKAP12Q02952 1782 aa10.74□□□□□ -0.69
MSH6-211ENST00000606499 KIF7Q2M1P5 1343 aa10.73□□□□□ -0.69
MSH6-211ENST00000606499 CCDC7Q96M83 1385 aa10.73□□□□□ -0.69
MSH6-211ENST00000606499 MON2Q7Z3U7 1717 aa10.72□□□□□ -0.69
MSH6-211ENST00000606499 CADPS2Q86UW7 1296 aa10.72□□□□□ -0.69
MSH6-211ENST00000606499 POLR3GLQ9BT43 218 aa10.72□□□□□ -0.69
MSH6-211ENST00000606499 WASHC2AQ641Q2 1341 aa10.72□□□□□ -0.69
MSH6-211ENST00000606499 PPIP5K1Q6PFW1 1433 aa10.72□□□□□ -0.69
MSH6-211ENST00000606499 NRKQ7Z2Y5 1582 aa10.72□□□□□ -0.69
MSH6-211ENST00000606499 NHSL1Q5SYE7 1610 aa10.72□□□□□ -0.69
MSH6-211ENST00000606499 SLC24A1O60721 1099 aa10.71□□□□□ -0.69
MSH6-211ENST00000606499 ATAD2Q6PL18 1390 aa10.71□□□□□ -0.69
MSH6-211ENST00000606499 NUDT16Q96DE0 195 aaKnown RBP10.71□□□□□ -0.69
MSH6-211ENST00000606499 CD163L1Q9NR16 1453 aa10.69□□□□□ -0.7
MSH6-211ENST00000606499 ZNF316A6NFI3 1004 aaPredicted RBP10.69□□□□□ -0.7
MSH6-211ENST00000606499 CDCA8Q53HL2 280 aa10.69□□□□□ -0.7
MSH6-211ENST00000606499 ORAI2Q96SN7 254 aa10.69□□□□□ -0.7
MSH6-211ENST00000606499 SLAIN2Q9P270 581 aa10.69□□□□□ -0.7
MSH6-211ENST00000606499 TRPM3Q9HCF6 1732 aaPredicted RBP10.69□□□□□ -0.7
MSH6-211ENST00000606499 UBAP1LF5GYI3 381 aa10.68□□□□□ -0.7
MSH6-211ENST00000606499 ESCO1Q5FWF5 840 aa10.68□□□□□ -0.7
MSH6-211ENST00000606499 PUS7Q96PZ0 661 aaKnown RBP10.68□□□□□ -0.7
MSH6-211ENST00000606499 PHLPP1O60346 1717 aa10.67□□□□□ -0.7
MSH6-211ENST00000606499 AHDC1Q5TGY3 1603 aaPredicted RBP10.67□□□□□ -0.7
MSH6-211ENST00000606499 BRINP3Q76B58 766 aa10.67□□□□□ -0.7
MSH6-211ENST00000606499 PMFBP1Q8TBY8 1022 aa10.67□□□□□ -0.7
MSH6-211ENST00000606499 TMC1Q8TDI8 760 aa10.67□□□□□ -0.7
MSH6-211ENST00000606499 SLC12A5Q9H2X9 1139 aa10.67□□□□□ -0.7
MSH6-211ENST00000606499 CABP1Q9NZU7 370 aa10.67□□□□□ -0.7
MSH6-211ENST00000606499 PHF8Q9UPP1 1060 aa10.67□□□□□ -0.7
MSH6-211ENST00000606499 CCDC61Q9Y6R9 512 aa10.67□□□□□ -0.7
MSH6-211ENST00000606499 KIF20BQ96Q89 1820 aa10.67□□□□□ -0.7
MSH6-211ENST00000606499 A0A1W2PP64 1363 aa10.66□□□□□ -0.7
MSH6-211ENST00000606499 NINLQ9Y2I6 1382 aa10.66□□□□□ -0.7
MSH6-211ENST00000606499 SCAF1Q9H7N4 1312 aaKnown RBP10.66□□□□□ -0.7
MSH6-211ENST00000606499 TOM1O60784 492 aa10.66□□□□□ -0.7
MSH6-211ENST00000606499 PIP4K2BP78356 416 aa10.66□□□□□ -0.7
MSH6-211ENST00000606499 PXDNQ92626 1479 aa10.66□□□□□ -0.7
MSH6-211ENST00000606499 CPSF1Q10570 1443 aaKnown RBP10.66□□□□□ -0.7
MSH6-211ENST00000606499 COL16A1Q07092 1604 aaPredicted RBP10.66□□□□□ -0.7
MSH6-211ENST00000606499 POLR3AO14802 1390 aaPredicted RBP10.65□□□□□ -0.7
MSH6-211ENST00000606499 ACEP12821 1306 aa10.65□□□□□ -0.7
MSH6-211ENST00000606499 DDX17Q92841 729 aaKnown RBP10.65□□□□□ -0.7
MSH6-211ENST00000606499 PIK3C2AO00443 1686 aa10.65□□□□□ -0.7
MSH6-211ENST00000606499 ALS2Q96Q42 1657 aa10.65□□□□□ -0.7
MSH6-211ENST00000606499 ANKRD36BQ8N2N9 1353 aa10.65□□□□□ -0.71
MSH6-211ENST00000606499 PLEKHG3A1L390 1219 aa10.64□□□□□ -0.71
MSH6-211ENST00000606499 USP6P35125 1406 aa10.64□□□□□ -0.71
MSH6-211ENST00000606499 ANKRD26Q9UPS8 1709 aa10.64□□□□□ -0.71
MSH6-211ENST00000606499 MARF1Q9Y4F3 1742 aaKnown RBP10.64□□□□□ -0.71
MSH6-211ENST00000606499 KTN1Q86UP2 1357 aaKnown RBP10.64□□□□□ -0.71
MSH6-211ENST00000606499 FOXO3O43524 673 aa10.63□□□□□ -0.71
MSH6-211ENST00000606499 XPCQ01831 940 aaPredicted RBP10.63□□□□□ -0.71
MSH6-211ENST00000606499 NGDNQ8NEJ9 315 aaKnown RBP10.63□□□□□ -0.71
MSH6-211ENST00000606499 ABCA3Q99758 1704 aa10.62□□□□□ -0.71
MSH6-211ENST00000606499 EDC4Q6P2E9 1401 aaKnown RBP10.62□□□□□ -0.71
MSH6-211ENST00000606499 NSD3Q9BZ95 1437 aa10.62□□□□□ -0.71
MSH6-211ENST00000606499 PIAS4Q8N2W9 510 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms