RNA–Protein interactions for RNA: ENST00000605852.1

FOCAD-217, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-217ENST00000605852 TFIP11Q9UBB9 837 aaKnown RBP9.03□□□□□ -0.96
FOCAD-217ENST00000605852 LHX6Q9UPM6 363 aa9.03□□□□□ -0.96
FOCAD-217ENST00000605852 CARNS1A5YM72 827 aa9.02□□□□□ -0.97
FOCAD-217ENST00000605852 SMAPO00193 183 aa9.02□□□□□ -0.97
FOCAD-217ENST00000605852 SOX11P35716 441 aa9.02□□□□□ -0.97
FOCAD-217ENST00000605852 GPR153Q6NV75 609 aa9.02□□□□□ -0.97
FOCAD-217ENST00000605852 LRRN4Q8WUT4 740 aa9.02□□□□□ -0.97
FOCAD-217ENST00000605852 HOXB3P14651 431 aaPredicted RBP9.01□□□□□ -0.97
FOCAD-217ENST00000605852 GUCA2AQ02747 115 aa9.01□□□□□ -0.97
FOCAD-217ENST00000605852 VRTNQ9H8Y1 702 aa9.01□□□□□ -0.97
FOCAD-217ENST00000605852 E9PSI1 815 aa9□□□□□ -0.97
FOCAD-217ENST00000605852 CCDC27Q2M243 656 aa9□□□□□ -0.97
FOCAD-217ENST00000605852 IVNS1ABPQ9Y6Y0 642 aa9□□□□□ -0.97
FOCAD-217ENST00000605852 ATG7O95352 703 aa8.99□□□□□ -0.97
FOCAD-217ENST00000605852 SEMA3FQ13275 785 aa8.99□□□□□ -0.97
FOCAD-217ENST00000605852 CDCA8Q53HL2 280 aa8.99□□□□□ -0.97
FOCAD-217ENST00000605852 PRR7Q8TB68 274 aa8.99□□□□□ -0.97
FOCAD-217ENST00000605852 HLA-CQ95604 372 aa8.99□□□□□ -0.97
FOCAD-217ENST00000605852 C6orf229H3BNL8 230 aa8.98□□□□□ -0.97
FOCAD-217ENST00000605852 UCN2Q96RP3 112 aa8.98□□□□□ -0.97
FOCAD-217ENST00000605852 CFAP99D6REC4 459 aa8.97□□□□□ -0.97
FOCAD-217ENST00000605852 SLC10A3P09131 477 aa8.97□□□□□ -0.97
FOCAD-217ENST00000605852 SND1Q7KZF4 910 aaKnown RBP eCLIP8.97□□□□□ -0.97
FOCAD-217ENST00000605852 PNMA1Q8ND90 353 aa8.97□□□□□ -0.97
FOCAD-217ENST00000605852 EPS8L1Q8TE68 723 aa8.97□□□□□ -0.97
FOCAD-217ENST00000605852 PROX2Q3B8N5 592 aa8.96□□□□□ -0.98
FOCAD-217ENST00000605852 GRIPAP1Q4V328 841 aa8.96□□□□□ -0.98
FOCAD-217ENST00000605852 AMOTL2Q9Y2J4 779 aa8.96□□□□□ -0.98
FOCAD-217ENST00000605852 MAFBQ9Y5Q3 323 aaPredicted RBP8.96□□□□□ -0.98
FOCAD-217ENST00000605852 TMEM88BA6NKF7 163 aa8.95□□□□□ -0.98
FOCAD-217ENST00000605852 POTEIP0CG38 1075 aa8.95□□□□□ -0.98
FOCAD-217ENST00000605852 SLF2Q8IX21 1173 aa8.95□□□□□ -0.98
FOCAD-217ENST00000605852 HDGFP51858 240 aaKnown RBP8.94□□□□□ -0.98
FOCAD-217ENST00000605852 SWT1Q5T5J6 900 aaKnown RBP8.94□□□□□ -0.98
FOCAD-217ENST00000605852 SP7Q8TDD2 431 aaPredicted RBP8.94□□□□□ -0.98
FOCAD-217ENST00000605852 KIAA1468Q9P260 1216 aa8.94□□□□□ -0.98
FOCAD-217ENST00000605852 EIF4G2P78344 907 aaKnown RBP eCLIP8.93□□□□□ -0.98
FOCAD-217ENST00000605852 NR6A1Q15406 480 aa8.93□□□□□ -0.98
FOCAD-217ENST00000605852 B4GALNT3Q6L9W6 998 aa8.93□□□□□ -0.98
FOCAD-217ENST00000605852 TBC1D9Q6ZT07 1266 aa8.93□□□□□ -0.98
FOCAD-217ENST00000605852 SLC4A3P48751 1232 aa8.92□□□□□ -0.98
FOCAD-217ENST00000605852 KCNH8Q96L42 1107 aa8.92□□□□□ -0.98
FOCAD-217ENST00000605852 ATP9BO43861 1147 aa8.91□□□□□ -0.98
FOCAD-217ENST00000605852 KCNK17Q96T54 332 aa8.91□□□□□ -0.98
FOCAD-217ENST00000605852 MYT1LQ9UL68 1186 aa8.91□□□□□ -0.98
FOCAD-217ENST00000605852 FUT2Q10981 343 aa8.9□□□□□ -0.98
FOCAD-217ENST00000605852 GNEQ9Y223 722 aaKnown RBP8.9□□□□□ -0.98
FOCAD-217ENST00000605852 SYMPKQ92797 1274 aaKnown RBP8.89□□□□□ -0.99
FOCAD-217ENST00000605852 PER1O15534 1290 aaPredicted RBP8.88□□□□□ -0.99
FOCAD-217ENST00000605852 ATP6V1AP38606 617 aa8.88□□□□□ -0.99
FOCAD-217ENST00000605852 ELOAQ14241 798 aaKnown RBP8.87□□□□□ -0.99
FOCAD-217ENST00000605852 IGSF3O75054 1194 aa8.86□□□□□ -0.99
FOCAD-217ENST00000605852 CFHP08603 1231 aa8.86□□□□□ -0.99
FOCAD-217ENST00000605852 NR1H3Q13133 447 aa8.86□□□□□ -0.99
FOCAD-217ENST00000605852 KANK4Q5T7N3 995 aaPredicted RBP8.86□□□□□ -0.99
FOCAD-217ENST00000605852 CCER1Q8TC90 406 aaPredicted RBP8.86□□□□□ -0.99
FOCAD-217ENST00000605852 ZBED2Q9BTP6 218 aa8.86□□□□□ -0.99
FOCAD-217ENST00000605852 SEPT9Q9UHD8 586 aaPredicted RBP8.85□□□□□ -0.99
FOCAD-217ENST00000605852 RABGEF1Q9UJ41 708 aa8.85□□□□□ -0.99
FOCAD-217ENST00000605852 LOC105371045A0A1W2PR82 267 aa8.84□□□□□ -0.99
FOCAD-217ENST00000605852 RETREG3Q86VR2 466 aa8.84□□□□□ -0.99
FOCAD-217ENST00000605852 TMEM164Q5U3C3 297 aa8.83□□□□□ -1
FOCAD-217ENST00000605852 DESI1Q6ICB0 168 aa8.83□□□□□ -1
FOCAD-217ENST00000605852 NFATC2IPQ8NCF5 419 aa8.83□□□□□ -1
FOCAD-217ENST00000605852 NOVA2Q9UNW9 492 aaKnown RBP8.83□□□□□ -1
FOCAD-217ENST00000605852 ZBBXA8MT70 800 aa8.82□□□□□ -1
FOCAD-217ENST00000605852 PIK3CDO00329 1044 aa8.82□□□□□ -1
FOCAD-217ENST00000605852 FBXO45P0C2W1 286 aa8.82□□□□□ -1
FOCAD-217ENST00000605852 FAM98CQ17RN3 349 aaKnown RBP8.82□□□□□ -1
FOCAD-217ENST00000605852 STK32AQ8WU08 396 aa8.82□□□□□ -1
FOCAD-217ENST00000605852 ZMIZ1Q9ULJ6 1067 aa8.82□□□□□ -1
FOCAD-217ENST00000605852 USP17L3A6NCW0 530 aa8.81□□□□□ -1
FOCAD-217ENST00000605852 USP17L4A6NCW7 530 aa8.81□□□□□ -1
FOCAD-217ENST00000605852 SKIP12755 728 aa8.81□□□□□ -1
FOCAD-217ENST00000605852 HOXB1P14653 301 aaPredicted RBP8.81□□□□□ -1
FOCAD-217ENST00000605852 Q3C1V9 767 aa8.81□□□□□ -1
FOCAD-217ENST00000605852 KMT5BQ4FZB7 885 aa8.81□□□□□ -1
FOCAD-217ENST00000605852 USP17L2Q6R6M4 530 aa8.81□□□□□ -1
FOCAD-217ENST00000605852 LYPD8Q6UX82 237 aa8.81□□□□□ -1
FOCAD-217ENST00000605852 USP17L1Q7RTZ2 530 aa8.81□□□□□ -1
FOCAD-217ENST00000605852 TXNDC2Q86VQ3 553 aa8.81□□□□□ -1
FOCAD-217ENST00000605852 SHROOM4Q9ULL8 1493 aa8.81□□□□□ -1
FOCAD-217ENST00000605852 RNF40O75150 1001 aa8.8□□□□□ -1
FOCAD-217ENST00000605852 SAMD7Q7Z3H4 446 aa8.8□□□□□ -1
FOCAD-217ENST00000605852 USP17L5A8MUK1 530 aa8.79□□□□□ -1
FOCAD-217ENST00000605852 POTEJP0CG39 1038 aa8.79□□□□□ -1
FOCAD-217ENST00000605852 ARID4AP29374 1257 aaPredicted RBP8.79□□□□□ -1
FOCAD-217ENST00000605852 PSEN2P49810 448 aa8.79□□□□□ -1
FOCAD-217ENST00000605852 PLEKHM2Q8IWE5 1019 aa8.79□□□□□ -1
FOCAD-217ENST00000605852 MORN1Q5T089 497 aa8.78□□□□□ -1
FOCAD-217ENST00000605852 PHLDB3Q6NSJ2 640 aa8.78□□□□□ -1
FOCAD-217ENST00000605852 SCUBE2Q9NQ36 999 aa8.78□□□□□ -1
FOCAD-217ENST00000605852 FKBPLQ9UIM3 349 aa8.78□□□□□ -1
FOCAD-217ENST00000605852 SLC27A5Q9Y2P5 690 aa8.78□□□□□ -1
FOCAD-217ENST00000605852 RBM47A0AV96 593 aaKnown RBP8.77□□□□□ -1.01
FOCAD-217ENST00000605852 FAM196BA6NMK8 535 aa8.77□□□□□ -1.01
FOCAD-217ENST00000605852 SNPHO15079 494 aa8.77□□□□□ -1.01
FOCAD-217ENST00000605852 LARP1Q6PKG0 1096 aaKnown RBP8.77□□□□□ -1.01
FOCAD-217ENST00000605852 DEPDC4Q8N2C3 294 aa8.77□□□□□ -1.01
FOCAD-217ENST00000605852 SLC4A5Q9BY07 1137 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms