RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 PTPRMP28827 1452 aa20.08■□□□□ 0.8
CCDC12-211ENST00000604367 CDCA7LQ96GN5 454 aa20.07■□□□□ 0.8
CCDC12-211ENST00000604367 INSRP06213 1382 aa20.07■□□□□ 0.8
CCDC12-211ENST00000604367 MORC1Q86VD1 984 aa20.06■□□□□ 0.8
CCDC12-211ENST00000604367 ERICH6BQ5W0A0 696 aa20.05■□□□□ 0.8
CCDC12-211ENST00000604367 PUS7Q96PZ0 661 aaKnown RBP20.05■□□□□ 0.8
CCDC12-211ENST00000604367 PDE3BQ13370 1112 aa20.04■□□□□ 0.8
CCDC12-211ENST00000604367 PPP4R2Q9NY27 417 aa20.03■□□□□ 0.8
CCDC12-211ENST00000604367 TNRQ92752 1358 aa20.03■□□□□ 0.8
CCDC12-211ENST00000604367 CGNL1Q0VF96 1302 aa20.02■□□□□ 0.8
CCDC12-211ENST00000604367 ANKRD36BQ8N2N9 1353 aa20.02■□□□□ 0.8
CCDC12-211ENST00000604367 CCDC146Q8IYE0 955 aa20.02■□□□□ 0.8
CCDC12-211ENST00000604367 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.79
CCDC12-211ENST00000604367 WAPLQ7Z5K2 1190 aa20.02■□□□□ 0.79
CCDC12-211ENST00000604367 TSHZ2Q9NRE2 1034 aa20.01■□□□□ 0.79
CCDC12-211ENST00000604367 RNF123Q5XPI4 1314 aa20■□□□□ 0.79
CCDC12-211ENST00000604367 CEBPAP49715 358 aaPredicted RBP20■□□□□ 0.79
CCDC12-211ENST00000604367 B4GALNT3Q6L9W6 998 aa19.99■□□□□ 0.79
CCDC12-211ENST00000604367 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.99■□□□□ 0.79
CCDC12-211ENST00000604367 CDK19Q9BWU1 502 aa19.98■□□□□ 0.79
CCDC12-211ENST00000604367 A0A1W2PP64 1363 aa19.98■□□□□ 0.79
CCDC12-211ENST00000604367 RCAN3Q9UKA8 241 aa19.98■□□□□ 0.79
CCDC12-211ENST00000604367 PLEKHH1Q9ULM0 1364 aa19.97■□□□□ 0.79
CCDC12-211ENST00000604367 ATAD2Q6PL18 1390 aa19.96■□□□□ 0.79
CCDC12-211ENST00000604367 METP08581 1390 aa19.95■□□□□ 0.78
CCDC12-211ENST00000604367 HDGFP51858 240 aaKnown RBP19.95■□□□□ 0.78
CCDC12-211ENST00000604367 SETD1AO15047 1707 aaKnown RBP19.95■□□□□ 0.78
CCDC12-211ENST00000604367 USP32Q8NFA0 1604 aa19.95■□□□□ 0.78
CCDC12-211ENST00000604367 NRXN3Q9Y4C0 1643 aa19.95■□□□□ 0.78
CCDC12-211ENST00000604367 POLR3AO14802 1390 aaPredicted RBP19.95■□□□□ 0.78
CCDC12-211ENST00000604367 MTHFSP49914 203 aa19.94■□□□□ 0.78
CCDC12-211ENST00000604367 NINLQ9Y2I6 1382 aa19.94■□□□□ 0.78
CCDC12-211ENST00000604367 APAF1O14727 1248 aa19.94■□□□□ 0.78
CCDC12-211ENST00000604367 TXNDC2Q86VQ3 553 aa19.94■□□□□ 0.78
CCDC12-211ENST00000604367 TERF2IPQ9NYB0 399 aa19.93■□□□□ 0.78
CCDC12-211ENST00000604367 CABP1Q9NZU7 370 aa19.93■□□□□ 0.78
CCDC12-211ENST00000604367 TMEM2Q9UHN6 1383 aa19.93■□□□□ 0.78
CCDC12-211ENST00000604367 RRP1P56182 461 aaKnown RBP19.92■□□□□ 0.78
CCDC12-211ENST00000604367 GGNBP2Q9H3C7 697 aa19.92■□□□□ 0.78
CCDC12-211ENST00000604367 ABCC11Q96J66 1382 aa19.92■□□□□ 0.78
CCDC12-211ENST00000604367 UBR1Q8IWV7 1749 aa19.91■□□□□ 0.78
CCDC12-211ENST00000604367 DLC1Q96QB1 1528 aa19.91■□□□□ 0.78
CCDC12-211ENST00000604367 NSD2O96028 1365 aa19.9■□□□□ 0.78
CCDC12-211ENST00000604367 CD163L1Q9NR16 1453 aa19.89■□□□□ 0.78
CCDC12-211ENST00000604367 HDGFL2Q7Z4V5 671 aaPredicted RBP19.89■□□□□ 0.77
CCDC12-211ENST00000604367 ZNF521Q96K83 1311 aa19.89■□□□□ 0.77
CCDC12-211ENST00000604367 GOLGA2Q08379 1002 aa19.88■□□□□ 0.77
CCDC12-211ENST00000604367 FYB1O15117 783 aa19.87■□□□□ 0.77
CCDC12-211ENST00000604367 LTKP29376 864 aa19.87■□□□□ 0.77
CCDC12-211ENST00000604367 CFAP53Q96M91 514 aa19.87■□□□□ 0.77
CCDC12-211ENST00000604367 DUSP27Q5VZP5 1158 aa19.85■□□□□ 0.77
CCDC12-211ENST00000604367 SHPRHQ149N8 1683 aa19.85■□□□□ 0.77
CCDC12-211ENST00000604367 WASLO00401 505 aaPredicted RBP19.84■□□□□ 0.77
CCDC12-211ENST00000604367 PLIN1O60240 522 aa19.84■□□□□ 0.77
CCDC12-211ENST00000604367 PRKCSHP14314 528 aaPredicted RBP19.84■□□□□ 0.77
CCDC12-211ENST00000604367 CCDC136Q96JN2 1154 aa19.84■□□□□ 0.77
CCDC12-211ENST00000604367 C3P01024 1663 aa19.84■□□□□ 0.77
CCDC12-211ENST00000604367 NLRP1Q9C000 1473 aa19.84■□□□□ 0.77
CCDC12-211ENST00000604367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.84■□□□□ 0.77
CCDC12-211ENST00000604367 NEUROD2Q15784 382 aa19.83■□□□□ 0.77
CCDC12-211ENST00000604367 SPINK5Q9NQ38 1064 aaPredicted RBP19.83■□□□□ 0.76
CCDC12-211ENST00000604367 SLC26A8Q96RN1 970 aa19.82■□□□□ 0.76
CCDC12-211ENST00000604367 FER1L4A9Z1Z3 1794 aa19.82■□□□□ 0.76
CCDC12-211ENST00000604367 SLFN5Q08AF3 891 aa19.82■□□□□ 0.76
CCDC12-211ENST00000604367 EXOC6Q8TAG9 804 aa19.82■□□□□ 0.76
CCDC12-211ENST00000604367 RRP7AQ9Y3A4 280 aaKnown RBP19.82■□□□□ 0.76
CCDC12-211ENST00000604367 ADAMTS13Q76LX8 1427 aa19.81■□□□□ 0.76
CCDC12-211ENST00000604367 NCKAP5LQ9HCH0 1330 aa19.81■□□□□ 0.76
CCDC12-211ENST00000604367 U2AF1L5P0DN76 240 aaPredicted RBP19.8■□□□□ 0.76
CCDC12-211ENST00000604367 U2AF1Q01081 240 aaKnown RBP eCLIP19.8■□□□□ 0.76
CCDC12-211ENST00000604367 RUNDC1Q96C34 613 aa19.8■□□□□ 0.76
CCDC12-211ENST00000604367 DMRT2Q9Y5R5 561 aa19.8■□□□□ 0.76
CCDC12-211ENST00000604367 EID1Q9Y6B2 187 aa19.8■□□□□ 0.76
CCDC12-211ENST00000604367 FAM135BQ49AJ0 1406 aa19.79■□□□□ 0.76
CCDC12-211ENST00000604367 ROBO2Q9HCK4 1378 aa19.79■□□□□ 0.76
CCDC12-211ENST00000604367 TECPR2O15040 1411 aa19.79■□□□□ 0.76
CCDC12-211ENST00000604367 NUDT16Q96DE0 195 aaKnown RBP19.78■□□□□ 0.76
CCDC12-211ENST00000604367 PLEKHG1Q9ULL1 1385 aa19.78■□□□□ 0.76
CCDC12-211ENST00000604367 PPIP5K1Q6PFW1 1433 aa19.78■□□□□ 0.76
CCDC12-211ENST00000604367 TCP11L2Q8N4U5 519 aa19.78■□□□□ 0.76
CCDC12-211ENST00000604367 SIRT1Q96EB6 747 aa19.77■□□□□ 0.76
CCDC12-211ENST00000604367 KNDC1Q76NI1 1749 aa19.77■□□□□ 0.76
CCDC12-211ENST00000604367 ATP7BP35670 1465 aa19.77■□□□□ 0.76
CCDC12-211ENST00000604367 WWC1Q8IX03 1113 aa19.77■□□□□ 0.76
CCDC12-211ENST00000604367 U2SURPO15042 1029 aaKnown RBP19.76■□□□□ 0.75
CCDC12-211ENST00000604367 CPS1P31327 1500 aa19.76■□□□□ 0.75
CCDC12-211ENST00000604367 FBLN1P23142 703 aa19.76■□□□□ 0.75
CCDC12-211ENST00000604367 MED14O60244 1454 aa19.76■□□□□ 0.75
CCDC12-211ENST00000604367 E9PSI1 815 aa19.75■□□□□ 0.75
CCDC12-211ENST00000604367 TRMT2AQ8IZ69 625 aaKnown RBP19.75■□□□□ 0.75
CCDC12-211ENST00000604367 NGEFQ8N5V2 710 aa19.75■□□□□ 0.75
CCDC12-211ENST00000604367 ANKRD26Q9UPS8 1709 aa19.75■□□□□ 0.75
CCDC12-211ENST00000604367 CCDC61Q9Y6R9 512 aa19.75■□□□□ 0.75
CCDC12-211ENST00000604367 NUTM2FA1L443 756 aa19.74■□□□□ 0.75
CCDC12-211ENST00000604367 KIF20BQ96Q89 1820 aa19.74■□□□□ 0.75
CCDC12-211ENST00000604367 RBM19Q9Y4C8 960 aaKnown RBP19.74■□□□□ 0.75
CCDC12-211ENST00000604367 PPM1GO15355 546 aaPredicted RBP19.73■□□□□ 0.75
CCDC12-211ENST00000604367 THEMISQ8N1K5 641 aaPredicted RBP19.73■□□□□ 0.75
CCDC12-211ENST00000604367 C20orf194Q5TEA3 1177 aa19.72■□□□□ 0.75
CCDC12-211ENST00000604367 PRR36Q9H6K5 1346 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms