RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 ITSN1Q15811 1721 aa16.8■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 PANK3Q9H999 370 aa16.8■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 CENPBP07199 599 aaPredicted RBP16.79■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 PRAM1Q96QH2 718 aa16.79■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 POGKQ9P215 609 aa16.79■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 TOPAZ1Q8N9V7 1692 aa16.78■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 BRD4O60885 1362 aaPredicted RBP16.77■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 NWD1Q149M9 1564 aa16.77■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 AKAP12Q02952 1782 aa16.77■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 MYBBP1AQ9BQG0 1328 aaKnown RBP16.77■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.77■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 ANKLE2Q86XL3 938 aa16.77■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 ATP7BP35670 1465 aa16.77■□□□□ 0.28
NEDD8-MDP1-203ENST00000604306 STK26Q9P289 416 aa16.76■□□□□ 0.27
NEDD8-MDP1-203ENST00000604306 NSD2O96028 1365 aa16.76■□□□□ 0.27
NEDD8-MDP1-203ENST00000604306 KIF20BQ96Q89 1820 aa16.75■□□□□ 0.27
NEDD8-MDP1-203ENST00000604306 KNSTRNQ9Y448 316 aa16.75■□□□□ 0.27
NEDD8-MDP1-203ENST00000604306 PTPRUQ92729 1446 aa16.75■□□□□ 0.27
NEDD8-MDP1-203ENST00000604306 MON2Q7Z3U7 1717 aa16.75■□□□□ 0.27
NEDD8-MDP1-203ENST00000604306 NPHP4O75161 1426 aaPredicted RBP16.73■□□□□ 0.27
NEDD8-MDP1-203ENST00000604306 AMER1Q5JTC6 1135 aaPredicted RBP16.73■□□□□ 0.27
NEDD8-MDP1-203ENST00000604306 ROBO2Q9HCK4 1378 aa16.73■□□□□ 0.27
NEDD8-MDP1-203ENST00000604306 BCANQ96GW7 911 aa16.72■□□□□ 0.27
NEDD8-MDP1-203ENST00000604306 INSRP06213 1382 aa16.72■□□□□ 0.27
NEDD8-MDP1-203ENST00000604306 NLRP13Q86W25 1043 aa16.71■□□□□ 0.27
NEDD8-MDP1-203ENST00000604306 PLEKHH1Q9ULM0 1364 aa16.71■□□□□ 0.27
NEDD8-MDP1-203ENST00000604306 CDC42BPGQ6DT37 1551 aa16.71■□□□□ 0.27
NEDD8-MDP1-203ENST00000604306 FMN2Q9NZ56 1722 aa16.7■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 PLPPR3Q6T4P5 718 aa16.7■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 MINK1Q8N4C8 1332 aaPredicted RBP16.7■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 CD163L1Q9NR16 1453 aa16.69■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 NSD3Q9BZ95 1437 aa16.69■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 NALCNQ8IZF0 1738 aa16.68■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 WASLO00401 505 aaPredicted RBP16.68■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 SRPK2P78362 688 aaKnown RBP16.68■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 MRS2Q9HD23 443 aa16.68■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 CDK19Q9BWU1 502 aa16.67■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 TERF2IPQ9NYB0 399 aa16.67■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 NKTRP30414 1462 aaKnown RBP16.67■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 NRKQ7Z2Y5 1582 aa16.66■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 ANKARQ7Z5J8 1434 aa16.66■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 WAPLQ7Z5K2 1190 aa16.66■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 SLC26A8Q96RN1 970 aa16.66■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 AMOTL2Q9Y2J4 779 aa16.66■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 CGNL1Q0VF96 1302 aa16.66■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 A0A1W2PP64 1363 aa16.65■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 CPSF1Q10570 1443 aaKnown RBP16.65■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 SAFB2Q14151 953 aaKnown RBP eCLIP16.65■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 CARD14Q9BXL6 1004 aa16.65■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 CABP2Q9NPB3 220 aa16.65■□□□□ 0.26
NEDD8-MDP1-203ENST00000604306 SLC12A5Q9H2X9 1139 aa16.64■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 TMC1Q8TDI8 760 aa16.63■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 PPIP5K1Q6PFW1 1433 aa16.62■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 LMTK3Q96Q04 1460 aa16.62■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 RGPD8O14715 1765 aaPredicted RBP16.62■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 HDGFL2Q7Z4V5 671 aaPredicted RBP16.62■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 YTHDC1Q96MU7 727 aaKnown RBP16.62■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 EDC4Q6P2E9 1401 aaKnown RBP16.62■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 STRCQ7RTU9 1775 aa16.61■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 CC2D1BQ5T0F9 858 aaKnown RBP16.61■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 USP54Q70EL1 1684 aa16.61■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 CCDC61Q9Y6R9 512 aa16.6■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 ADGRL3Q9HAR2 1447 aa16.6■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 NCOA3Q9Y6Q9 1424 aa16.6■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 KDM4FA0A1W2PPD8 638 aa16.59■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 CCDC184Q52MB2 194 aa16.59■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 PNISRQ8TF01 805 aaKnown RBP16.59■□□□□ 0.25
NEDD8-MDP1-203ENST00000604306 KCNA6P17658 529 aa16.58■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 PPP2R1AP30153 589 aa16.57■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 NUDT16Q96DE0 195 aaKnown RBP16.57■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 LRRC7Q96NW7 1537 aa16.56■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 POLR3AO14802 1390 aaPredicted RBP16.56■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 PLEKHG3A1L390 1219 aa16.56■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 STRCP1A6NGW2 1772 aa16.56■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 SHPRHQ149N8 1683 aa16.56■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 CABP1Q9NZU7 370 aa16.55■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 BLMP54132 1417 aaPredicted RBP16.54■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 KIF1AQ12756 1690 aa16.54■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 MAP2P11137 1827 aaKnown RBP16.54■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 DCCP43146 1447 aa16.53■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 ZBED9Q6R2W3 1325 aa16.53■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 PRR36Q9H6K5 1346 aa16.53■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 NCKAP5LQ9HCH0 1330 aa16.52■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 MORC1Q86VD1 984 aa16.52■□□□□ 0.24
NEDD8-MDP1-203ENST00000604306 FAM9BQ8IZU0 186 aa16.51■□□□□ 0.23
NEDD8-MDP1-203ENST00000604306 USP6P35125 1406 aa16.51■□□□□ 0.23
NEDD8-MDP1-203ENST00000604306 SSH2Q76I76 1423 aa16.5■□□□□ 0.23
NEDD8-MDP1-203ENST00000604306 XIRP1Q702N8 1843 aaKnown RBP16.49■□□□□ 0.23
NEDD8-MDP1-203ENST00000604306 FYB1O15117 783 aa16.49■□□□□ 0.23
NEDD8-MDP1-203ENST00000604306 HNRNPUQ00839 825 aaKnown RBP eCLIP16.49■□□□□ 0.23
NEDD8-MDP1-203ENST00000604306 SMG6Q86US8 1419 aaKnown RBP16.49■□□□□ 0.23
NEDD8-MDP1-203ENST00000604306 AATKQ6ZMQ8 1374 aa16.48■□□□□ 0.23
NEDD8-MDP1-203ENST00000604306 TTC21AQ8NDW8 1320 aa16.47■□□□□ 0.23
NEDD8-MDP1-203ENST00000604306 CNGB1Q14028 1251 aaPredicted RBP16.46■□□□□ 0.23
NEDD8-MDP1-203ENST00000604306 PIK3C2AO00443 1686 aa16.46■□□□□ 0.23
NEDD8-MDP1-203ENST00000604306 MARF1Q9Y4F3 1742 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms