RNA–Protein interactions for RNA: ENST00000603844.1

FOCAD-210, Transcript of focadhesin, humanhuman

TSL 3

Gene FOCAD, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-210ENST00000603844 Q3C1V9 767 aa11.07□□□□□ -0.64
FOCAD-210ENST00000603844 SMCPP49901 116 aaPredicted RBP11.06□□□□□ -0.64
FOCAD-210ENST00000603844 LCE2AQ5TA79 106 aaPredicted RBP11.06□□□□□ -0.64
FOCAD-210ENST00000603844 CD46P15529 392 aa11.05□□□□□ -0.64
FOCAD-210ENST00000603844 TTC24A2A3L6 582 aaPredicted RBP11.04□□□□□ -0.64
FOCAD-210ENST00000603844 WNT7AO00755 349 aa11.04□□□□□ -0.64
FOCAD-210ENST00000603844 MMP16P51512 607 aa11.04□□□□□ -0.64
FOCAD-210ENST00000603844 GMPR2Q9P2T1 348 aaKnown RBP11.03□□□□□ -0.64
FOCAD-210ENST00000603844 TRIM32Q13049 653 aa11.02□□□□□ -0.65
FOCAD-210ENST00000603844 MAP2K5Q13163 448 aa11.01□□□□□ -0.65
FOCAD-210ENST00000603844 SNIP1Q8TAD8 396 aaKnown RBP11.01□□□□□ -0.65
FOCAD-210ENST00000603844 C11orf95C9JLR9 678 aaPredicted RBP11□□□□□ -0.65
FOCAD-210ENST00000603844 KDM4AO75164 1064 aa11□□□□□ -0.65
FOCAD-210ENST00000603844 USB1Q9BQ65 265 aaKnown RBP11□□□□□ -0.65
FOCAD-210ENST00000603844 DXOO77932 396 aaKnown RBP10.99□□□□□ -0.65
FOCAD-210ENST00000603844 SMPD1P17405 629 aa10.99□□□□□ -0.65
FOCAD-210ENST00000603844 USP46P62068 366 aa10.97□□□□□ -0.65
FOCAD-210ENST00000603844 MRGPRX2Q96LB1 330 aa10.97□□□□□ -0.65
FOCAD-210ENST00000603844 IRF6O14896 467 aa10.96□□□□□ -0.65
FOCAD-210ENST00000603844 WFS1O76024 890 aa10.95□□□□□ -0.66
FOCAD-210ENST00000603844 REPIN1Q9BWE0 567 aaKnown RBP10.95□□□□□ -0.66
FOCAD-210ENST00000603844 J3QL48 77 aa10.94□□□□□ -0.66
FOCAD-210ENST00000603844 MDM2Q00987 491 aaPredicted RBP10.94□□□□□ -0.66
FOCAD-210ENST00000603844 HLA-CQ95604 372 aa10.94□□□□□ -0.66
FOCAD-210ENST00000603844 MINK1Q8N4C8 1332 aaPredicted RBP10.93□□□□□ -0.66
FOCAD-210ENST00000603844 HAP1P54257 671 aaPredicted RBP10.93□□□□□ -0.66
FOCAD-210ENST00000603844 ATP13A2Q9NQ11 1180 aa10.93□□□□□ -0.66
FOCAD-210ENST00000603844 KDM2AQ9Y2K7 1162 aa10.93□□□□□ -0.66
FOCAD-210ENST00000603844 HOXA2O43364 376 aa10.92□□□□□ -0.66
FOCAD-210ENST00000603844 TULP1O00294 542 aaPredicted RBP10.91□□□□□ -0.66
FOCAD-210ENST00000603844 NFX1Q12986 1120 aaKnown RBP10.91□□□□□ -0.66
FOCAD-210ENST00000603844 CCDC24Q8N4L8 307 aa10.91□□□□□ -0.66
FOCAD-210ENST00000603844 WNT7BP56706 349 aa10.9□□□□□ -0.66
FOCAD-210ENST00000603844 RC3H1Q5TC82 1133 aaKnown RBP10.9□□□□□ -0.66
FOCAD-210ENST00000603844 SKOR1P84550 965 aa10.89□□□□□ -0.67
FOCAD-210ENST00000603844 HPS1Q92902 700 aa10.89□□□□□ -0.67
FOCAD-210ENST00000603844 SENP2Q9HC62 589 aa10.89□□□□□ -0.67
FOCAD-210ENST00000603844 JUNDP17535 347 aa10.88□□□□□ -0.67
FOCAD-210ENST00000603844 TRIM47Q96LD4 638 aa10.88□□□□□ -0.67
FOCAD-210ENST00000603844 SNRPBP14678 240 aaKnown RBP10.87□□□□□ -0.67
FOCAD-210ENST00000603844 CCDC102AQ96A19 550 aa10.87□□□□□ -0.67
FOCAD-210ENST00000603844 GPCPD1Q9NPB8 672 aa10.87□□□□□ -0.67
FOCAD-210ENST00000603844 CLCN1P35523 988 aa10.86□□□□□ -0.67
FOCAD-210ENST00000603844 GUCA2AQ02747 115 aa10.86□□□□□ -0.67
FOCAD-210ENST00000603844 FAM217BQ9NTX9 383 aaPredicted RBP10.86□□□□□ -0.67
FOCAD-210ENST00000603844 WIPF1O43516 503 aa10.85□□□□□ -0.67
FOCAD-210ENST00000603844 SYMPKQ92797 1274 aaKnown RBP10.84□□□□□ -0.67
FOCAD-210ENST00000603844 RETREG3Q86VR2 466 aa10.83□□□□□ -0.68
FOCAD-210ENST00000603844 KIFC2Q96AC6 838 aa10.83□□□□□ -0.68
FOCAD-210ENST00000603844 TERTO14746 1132 aaKnown RBP10.82□□□□□ -0.68
FOCAD-210ENST00000603844 NUTM1Q86Y26 1132 aa10.82□□□□□ -0.68
FOCAD-210ENST00000603844 ALDH1A1P00352 501 aa10.81□□□□□ -0.68
FOCAD-210ENST00000603844 NUDT12Q9BQG2 462 aa10.81□□□□□ -0.68
FOCAD-210ENST00000603844 STK17AQ9UEE5 414 aa10.81□□□□□ -0.68
FOCAD-210ENST00000603844 INSM1Q01101 510 aaPredicted RBP10.8□□□□□ -0.68
FOCAD-210ENST00000603844 PTCRAQ6ISU1 281 aaPredicted RBP10.8□□□□□ -0.68
FOCAD-210ENST00000603844 SIAH2O43255 324 aa10.79□□□□□ -0.68
FOCAD-210ENST00000603844 LCE2CQ5TA81 110 aa10.79□□□□□ -0.68
FOCAD-210ENST00000603844 FDX1P10109 184 aa10.78□□□□□ -0.68
FOCAD-210ENST00000603844 KRI1Q8N9T8 703 aaKnown RBP10.78□□□□□ -0.68
FOCAD-210ENST00000603844 EHBP1Q8NDI1 1231 aa10.77□□□□□ -0.69
FOCAD-210ENST00000603844 PCDHGC3Q9UN70 934 aa10.76□□□□□ -0.69
FOCAD-210ENST00000603844 C6orf229H3BNL8 230 aa10.75□□□□□ -0.69
FOCAD-210ENST00000603844 CCNYL3P0C7X3 344 aa10.75□□□□□ -0.69
FOCAD-210ENST00000603844 VSIG10Q8N0Z9 540 aa10.75□□□□□ -0.69
FOCAD-210ENST00000603844 MS4A1P11836 297 aa10.74□□□□□ -0.69
FOCAD-210ENST00000603844 SH3BP2P78314 561 aa10.73□□□□□ -0.69
FOCAD-210ENST00000603844 WASF2Q9Y6W5 498 aa10.73□□□□□ -0.69
FOCAD-210ENST00000603844 SSTR3P32745 418 aaPredicted RBP10.72□□□□□ -0.69
FOCAD-210ENST00000603844 PTPRNQ16849 979 aa10.72□□□□□ -0.69
FOCAD-210ENST00000603844 SPIRE2Q8WWL2 714 aa10.72□□□□□ -0.69
FOCAD-210ENST00000603844 CAPN5O15484 640 aaPredicted RBP10.71□□□□□ -0.69
FOCAD-210ENST00000603844 TRIM46Q7Z4K8 759 aa10.71□□□□□ -0.69
FOCAD-210ENST00000603844 EVA1BQ9NVM1 165 aa10.71□□□□□ -0.69
FOCAD-210ENST00000603844 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.7□□□□□ -0.7
FOCAD-210ENST00000603844 BMP1P13497 986 aa10.69□□□□□ -0.7
FOCAD-210ENST00000603844 SLC16A10Q8TF71 515 aa10.69□□□□□ -0.7
FOCAD-210ENST00000603844 UNC93B1Q9H1C4 597 aa10.69□□□□□ -0.7
FOCAD-210ENST00000603844 NXF1Q9UBU9 619 aaKnown RBP10.69□□□□□ -0.7
FOCAD-210ENST00000603844 NDUFV2P19404 249 aa10.68□□□□□ -0.7
FOCAD-210ENST00000603844 MOXD2PA6NHM9 499 aa10.67□□□□□ -0.7
FOCAD-210ENST00000603844 KCNH2Q12809 1159 aa10.67□□□□□ -0.7
FOCAD-210ENST00000603844 SPDYE5A6NIY4 337 aa10.66□□□□□ -0.7
FOCAD-210ENST00000603844 DESI1Q6ICB0 168 aa10.66□□□□□ -0.7
FOCAD-210ENST00000603844 NPAS3Q8IXF0 933 aa10.66□□□□□ -0.7
FOCAD-210ENST00000603844 PRR7Q8TB68 274 aa10.66□□□□□ -0.7
FOCAD-210ENST00000603844 BAP1Q92560 729 aa10.66□□□□□ -0.7
FOCAD-210ENST00000603844 LINC01559Q495D7 138 aa10.65□□□□□ -0.7
FOCAD-210ENST00000603844 MPNDQ8N594 471 aa10.65□□□□□ -0.7
FOCAD-210ENST00000603844 MTMR2Q13614 643 aa10.64□□□□□ -0.71
FOCAD-210ENST00000603844 TTLL12Q14166 644 aaPredicted RBP10.64□□□□□ -0.71
FOCAD-210ENST00000603844 ZNF511Q8NB15 262 aa10.64□□□□□ -0.71
FOCAD-210ENST00000603844 TLL2Q9Y6L7 1015 aa10.64□□□□□ -0.71
FOCAD-210ENST00000603844 PLEKHG3A1L390 1219 aa10.63□□□□□ -0.71
FOCAD-210ENST00000603844 VARSP26640 1264 aaKnown RBP10.63□□□□□ -0.71
FOCAD-210ENST00000603844 AMHR2Q16671 573 aa10.63□□□□□ -0.71
FOCAD-210ENST00000603844 BARGINQ6ZT62 677 aa10.63□□□□□ -0.71
FOCAD-210ENST00000603844 IRF7Q92985 503 aa10.62□□□□□ -0.71
FOCAD-210ENST00000603844 GMPRP36959 345 aa10.61□□□□□ -0.71
FOCAD-210ENST00000603844 ZFP42Q96MM3 310 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms