RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 XIRP1Q702N8 1843 aaKnown RBP17.51■□□□□ 0.39
HERPUD2-207ENST00000603731 MIER1Q8N108 512 aa17.5■□□□□ 0.39
HERPUD2-207ENST00000603731 LRPPRCP42704 1394 aaKnown RBP17.5■□□□□ 0.39
HERPUD2-207ENST00000603731 SBNO2Q9Y2G9 1366 aa17.5■□□□□ 0.39
HERPUD2-207ENST00000603731 KNDC1Q76NI1 1749 aa17.5■□□□□ 0.39
HERPUD2-207ENST00000603731 ANP32CO43423 234 aa17.49■□□□□ 0.39
HERPUD2-207ENST00000603731 POGKQ9P215 609 aa17.49■□□□□ 0.39
HERPUD2-207ENST00000603731 DIP2AQ14689 1571 aa17.49■□□□□ 0.39
HERPUD2-207ENST00000603731 ADAMTS13Q76LX8 1427 aa17.48■□□□□ 0.39
HERPUD2-207ENST00000603731 DLC1Q96QB1 1528 aa17.48■□□□□ 0.39
HERPUD2-207ENST00000603731 FAM135BQ49AJ0 1406 aa17.47■□□□□ 0.39
HERPUD2-207ENST00000603731 METP08581 1390 aa17.47■□□□□ 0.39
HERPUD2-207ENST00000603731 ABCC11Q96J66 1382 aa17.46■□□□□ 0.39
HERPUD2-207ENST00000603731 PRAM1Q96QH2 718 aa17.46■□□□□ 0.39
HERPUD2-207ENST00000603731 TBX22Q9Y458 520 aa17.46■□□□□ 0.39
HERPUD2-207ENST00000603731 SLC26A8Q96RN1 970 aa17.45■□□□□ 0.38
HERPUD2-207ENST00000603731 SAFB2Q14151 953 aaKnown RBP eCLIP17.44■□□□□ 0.38
HERPUD2-207ENST00000603731 EVC2Q86UK5 1308 aa17.44■□□□□ 0.38
HERPUD2-207ENST00000603731 ROBO1Q9Y6N7 1651 aa17.43■□□□□ 0.38
HERPUD2-207ENST00000603731 SIRT1Q96EB6 747 aa17.42■□□□□ 0.38
HERPUD2-207ENST00000603731 TECPR2O15040 1411 aa17.4■□□□□ 0.38
HERPUD2-207ENST00000603731 MINK1Q8N4C8 1332 aaPredicted RBP17.4■□□□□ 0.38
HERPUD2-207ENST00000603731 WAPLQ7Z5K2 1190 aa17.39■□□□□ 0.37
HERPUD2-207ENST00000603731 PIK3R4Q99570 1358 aa17.39■□□□□ 0.37
HERPUD2-207ENST00000603731 MYOM1P52179 1685 aa17.39■□□□□ 0.37
HERPUD2-207ENST00000603731 TULP4Q9NRJ4 1543 aa17.38■□□□□ 0.37
HERPUD2-207ENST00000603731 PUS7Q96PZ0 661 aaKnown RBP17.38■□□□□ 0.37
HERPUD2-207ENST00000603731 PANK3Q9H999 370 aa17.37■□□□□ 0.37
HERPUD2-207ENST00000603731 AMOTL2Q9Y2J4 779 aa17.37■□□□□ 0.37
HERPUD2-207ENST00000603731 CHD2O14647 1828 aaKnown RBP17.36■□□□□ 0.37
HERPUD2-207ENST00000603731 SRPK2P78362 688 aaKnown RBP17.36■□□□□ 0.37
HERPUD2-207ENST00000603731 PLEKHH1Q9ULM0 1364 aa17.36■□□□□ 0.37
HERPUD2-207ENST00000603731 PTPRUQ92729 1446 aa17.36■□□□□ 0.37
HERPUD2-207ENST00000603731 XRN1Q8IZH2 1706 aaKnown RBP17.35■□□□□ 0.37
HERPUD2-207ENST00000603731 TMC1Q8TDI8 760 aa17.34■□□□□ 0.37
HERPUD2-207ENST00000603731 ROBO2Q9HCK4 1378 aa17.34■□□□□ 0.37
HERPUD2-207ENST00000603731 PHLPP1O60346 1717 aa17.33■□□□□ 0.37
HERPUD2-207ENST00000603731 CABP2Q9NPB3 220 aa17.33■□□□□ 0.36
HERPUD2-207ENST00000603731 LRP6O75581 1613 aa17.32■□□□□ 0.36
HERPUD2-207ENST00000603731 PTCH1Q13635 1447 aa17.32■□□□□ 0.36
HERPUD2-207ENST00000603731 ATAD2Q6PL18 1390 aa17.32■□□□□ 0.36
HERPUD2-207ENST00000603731 JCADQ9P266 1359 aa17.32■□□□□ 0.36
HERPUD2-207ENST00000603731 CDK19Q9BWU1 502 aa17.32■□□□□ 0.36
HERPUD2-207ENST00000603731 TMEM94Q12767 1356 aa17.31■□□□□ 0.36
HERPUD2-207ENST00000603731 CCER2I3L3R5 266 aa17.31■□□□□ 0.36
HERPUD2-207ENST00000603731 CNGB1Q14028 1251 aaPredicted RBP17.31■□□□□ 0.36
HERPUD2-207ENST00000603731 PRKRIP1Q9H875 184 aaPredicted RBP17.31■□□□□ 0.36
HERPUD2-207ENST00000603731 KNSTRNQ9Y448 316 aa17.3■□□□□ 0.36
HERPUD2-207ENST00000603731 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.3■□□□□ 0.36
HERPUD2-207ENST00000603731 NINLQ9Y2I6 1382 aa17.29■□□□□ 0.36
HERPUD2-207ENST00000603731 WASLO00401 505 aaPredicted RBP17.29■□□□□ 0.36
HERPUD2-207ENST00000603731 ADGRB2O60241 1585 aa17.28■□□□□ 0.36
HERPUD2-207ENST00000603731 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
HERPUD2-207ENST00000603731 KCNA6P17658 529 aa17.28■□□□□ 0.36
HERPUD2-207ENST00000603731 ZNF772Q68DY9 489 aaPredicted RBP17.28■□□□□ 0.36
HERPUD2-207ENST00000603731 SLC12A5Q9H2X9 1139 aa17.28■□□□□ 0.36
HERPUD2-207ENST00000603731 KTN1Q86UP2 1357 aaKnown RBP17.28■□□□□ 0.36
HERPUD2-207ENST00000603731 COL16A1Q07092 1604 aaPredicted RBP17.26■□□□□ 0.35
HERPUD2-207ENST00000603731 RALBP1Q15311 655 aa17.25■□□□□ 0.35
HERPUD2-207ENST00000603731 RBM33Q96EV2 1170 aaKnown RBP17.25■□□□□ 0.35
HERPUD2-207ENST00000603731 CDK12Q9NYV4 1490 aaPredicted RBP17.24■□□□□ 0.35
HERPUD2-207ENST00000603731 RXRBP28702 533 aa17.24■□□□□ 0.35
HERPUD2-207ENST00000603731 CC2D1BQ5T0F9 858 aaKnown RBP17.24■□□□□ 0.35
HERPUD2-207ENST00000603731 MEX3CQ5U5Q3 659 aaKnown RBP17.24■□□□□ 0.35
HERPUD2-207ENST00000603731 ANKRD36BQ8N2N9 1353 aa17.24■□□□□ 0.35
HERPUD2-207ENST00000603731 NWD1Q149M9 1564 aa17.23■□□□□ 0.35
HERPUD2-207ENST00000603731 HDGFL2Q7Z4V5 671 aaPredicted RBP17.23■□□□□ 0.35
HERPUD2-207ENST00000603731 TERF2IPQ9NYB0 399 aa17.23■□□□□ 0.35
HERPUD2-207ENST00000603731 NUDT16Q96DE0 195 aaKnown RBP17.21■□□□□ 0.35
HERPUD2-207ENST00000603731 NSD3Q9BZ95 1437 aa17.21■□□□□ 0.34
HERPUD2-207ENST00000603731 SPATA31A6Q5VVP1 1343 aa17.21■□□□□ 0.34
HERPUD2-207ENST00000603731 NPC1L1Q9UHC9 1359 aa17.2■□□□□ 0.34
HERPUD2-207ENST00000603731 CARD14Q9BXL6 1004 aa17.2■□□□□ 0.34
HERPUD2-207ENST00000603731 CABP1Q9NZU7 370 aa17.2■□□□□ 0.34
HERPUD2-207ENST00000603731 ITSN1Q15811 1721 aa17.2■□□□□ 0.34
HERPUD2-207ENST00000603731 NALCNQ8IZF0 1738 aa17.19■□□□□ 0.34
HERPUD2-207ENST00000603731 PARD3Q8TEW0 1356 aa17.19■□□□□ 0.34
HERPUD2-207ENST00000603731 USP32Q8NFA0 1604 aa17.19■□□□□ 0.34
HERPUD2-207ENST00000603731 AMER1Q5JTC6 1135 aaPredicted RBP17.19■□□□□ 0.34
HERPUD2-207ENST00000603731 PROSER2Q86WR7 435 aaPredicted RBP17.19■□□□□ 0.34
HERPUD2-207ENST00000603731 CCDC61Q9Y6R9 512 aa17.19■□□□□ 0.34
HERPUD2-207ENST00000603731 PPIP5K1Q6PFW1 1433 aa17.19■□□□□ 0.34
HERPUD2-207ENST00000603731 MYBBP1AQ9BQG0 1328 aaKnown RBP17.19■□□□□ 0.34
HERPUD2-207ENST00000603731 ATP7BP35670 1465 aa17.18■□□□□ 0.34
HERPUD2-207ENST00000603731 C14orf37Q86TY3 774 aa17.18■□□□□ 0.34
HERPUD2-207ENST00000603731 SLAIN2Q9P270 581 aa17.18■□□□□ 0.34
HERPUD2-207ENST00000603731 NKTRP30414 1462 aaKnown RBP17.18■□□□□ 0.34
HERPUD2-207ENST00000603731 A0A1W2PP64 1363 aa17.17■□□□□ 0.34
HERPUD2-207ENST00000603731 SHPRHQ149N8 1683 aa17.17■□□□□ 0.34
HERPUD2-207ENST00000603731 YTHDC1Q96MU7 727 aaKnown RBP17.17■□□□□ 0.34
HERPUD2-207ENST00000603731 MRS2Q9HD23 443 aa17.17■□□□□ 0.34
HERPUD2-207ENST00000603731 FMN2Q9NZ56 1722 aa17.17■□□□□ 0.34
HERPUD2-207ENST00000603731 RGPD8O14715 1765 aaPredicted RBP17.17■□□□□ 0.34
HERPUD2-207ENST00000603731 CGNL1Q0VF96 1302 aa17.17■□□□□ 0.34
HERPUD2-207ENST00000603731 TOPAZ1Q8N9V7 1692 aa17.16■□□□□ 0.34
HERPUD2-207ENST00000603731 AKAP12Q02952 1782 aa17.16■□□□□ 0.34
HERPUD2-207ENST00000603731 RGS12O14924 1447 aa17.15■□□□□ 0.34
HERPUD2-207ENST00000603731 NUTM2FA1L443 756 aa17.15■□□□□ 0.34
HERPUD2-207ENST00000603731 PRR36Q9H6K5 1346 aa17.15■□□□□ 0.34
HERPUD2-207ENST00000603731 CDC42BPGQ6DT37 1551 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms