RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 SPIRE2Q8WWL2 714 aa12.5□□□□□ -0.41
TUBE1-205ENST00000603651 FDX1P10109 184 aa12.49□□□□□ -0.41
TUBE1-205ENST00000603651 USB1Q9BQ65 265 aaKnown RBP12.49□□□□□ -0.41
TUBE1-205ENST00000603651 MS4A1P11836 297 aa12.48□□□□□ -0.41
TUBE1-205ENST00000603651 MSS51Q4VC12 460 aa12.47□□□□□ -0.41
TUBE1-205ENST00000603651 SPRYD7Q5W111 196 aa12.47□□□□□ -0.41
TUBE1-205ENST00000603651 PDZRN3Q9UPQ7 1066 aa12.47□□□□□ -0.41
TUBE1-205ENST00000603651 MOXD2PA6NHM9 499 aa12.46□□□□□ -0.41
TUBE1-205ENST00000603651 C6orf229H3BNL8 230 aa12.46□□□□□ -0.41
TUBE1-205ENST00000603651 ZNF697Q5TEC3 545 aa12.46□□□□□ -0.41
TUBE1-205ENST00000603651 CCDC24Q8N4L8 307 aa12.45□□□□□ -0.42
TUBE1-205ENST00000603651 TBC1D2Q9BYX2 928 aa12.44□□□□□ -0.42
TUBE1-205ENST00000603651 PCDHGC3Q9UN70 934 aa12.44□□□□□ -0.42
TUBE1-205ENST00000603651 ZNF598Q86UK7 904 aaKnown RBP12.43□□□□□ -0.42
TUBE1-205ENST00000603651 TNFRSF10AO00220 468 aa12.41□□□□□ -0.42
TUBE1-205ENST00000603651 ZBTB24O43167 697 aaPredicted RBP12.41□□□□□ -0.42
TUBE1-205ENST00000603651 FOXC1Q12948 553 aa12.41□□□□□ -0.42
TUBE1-205ENST00000603651 LAPTM4AQ15012 233 aa12.41□□□□□ -0.42
TUBE1-205ENST00000603651 NRG2O14511 850 aaPredicted RBP12.39□□□□□ -0.43
TUBE1-205ENST00000603651 CSPP1Q1MSJ5 1256 aa12.39□□□□□ -0.43
TUBE1-205ENST00000603651 DXOO77932 396 aaKnown RBP12.38□□□□□ -0.43
TUBE1-205ENST00000603651 MMP16P51512 607 aa12.38□□□□□ -0.43
TUBE1-205ENST00000603651 RETREG3Q86VR2 466 aa12.38□□□□□ -0.43
TUBE1-205ENST00000603651 JUNDP17535 347 aa12.37□□□□□ -0.43
TUBE1-205ENST00000603651 TRIM67Q6ZTA4 783 aa12.37□□□□□ -0.43
TUBE1-205ENST00000603651 CD2BP2O95400 341 aaKnown RBP12.36□□□□□ -0.43
TUBE1-205ENST00000603651 RPIAP49247 311 aa12.36□□□□□ -0.43
TUBE1-205ENST00000603651 DIXDC1Q155Q3 683 aa12.36□□□□□ -0.43
TUBE1-205ENST00000603651 RSBN1LQ6PCB5 846 aaPredicted RBP12.35□□□□□ -0.43
TUBE1-205ENST00000603651 PCDHB15Q9Y5E8 787 aa12.35□□□□□ -0.43
TUBE1-205ENST00000603651 RIC3Q7Z5B4 369 aa12.34□□□□□ -0.43
TUBE1-205ENST00000603651 GPBP1L1Q9HC44 474 aaPredicted RBP12.34□□□□□ -0.43
TUBE1-205ENST00000603651 MTMR2Q13614 643 aa12.33□□□□□ -0.44
TUBE1-205ENST00000603651 PRR7Q8TB68 274 aa12.33□□□□□ -0.44
TUBE1-205ENST00000603651 GDF9O60383 454 aa12.31□□□□□ -0.44
TUBE1-205ENST00000603651 CABLES1Q8TDN4 633 aa12.31□□□□□ -0.44
TUBE1-205ENST00000603651 NUDT12Q9BQG2 462 aa12.31□□□□□ -0.44
TUBE1-205ENST00000603651 FAM187AA6NFU0 413 aa12.3□□□□□ -0.44
TUBE1-205ENST00000603651 SPTLC1O15269 473 aa12.3□□□□□ -0.44
TUBE1-205ENST00000603651 TRIM32Q13049 653 aa12.3□□□□□ -0.44
TUBE1-205ENST00000603651 MYSM1Q5VVJ2 828 aa12.29□□□□□ -0.44
TUBE1-205ENST00000603651 TRAF7Q6Q0C0 670 aa12.29□□□□□ -0.44
TUBE1-205ENST00000603651 TSC1Q92574 1164 aa12.29□□□□□ -0.44
TUBE1-205ENST00000603651 POLR3EQ9NVU0 708 aa12.29□□□□□ -0.44
TUBE1-205ENST00000603651 PKD2L1Q9P0L9 805 aa12.29□□□□□ -0.44
TUBE1-205ENST00000603651 LIMD1Q9UGP4 676 aa12.29□□□□□ -0.44
TUBE1-205ENST00000603651 ATP1B4Q9UN42 357 aaPredicted RBP12.29□□□□□ -0.44
TUBE1-205ENST00000603651 PKDCCQ504Y2 493 aa12.28□□□□□ -0.44
TUBE1-205ENST00000603651 KDM4CQ9H3R0 1056 aa12.28□□□□□ -0.44
TUBE1-205ENST00000603651 NUTM2BA6NNL0 878 aaPredicted RBP12.27□□□□□ -0.45
TUBE1-205ENST00000603651 NUTM2EB1AL46 878 aaPredicted RBP12.27□□□□□ -0.45
TUBE1-205ENST00000603651 PRR20EP86478 221 aa12.27□□□□□ -0.45
TUBE1-205ENST00000603651 PRR20CP86479 221 aa12.27□□□□□ -0.45
TUBE1-205ENST00000603651 PRR20DP86480 221 aa12.27□□□□□ -0.45
TUBE1-205ENST00000603651 PRR20BP86481 221 aa12.27□□□□□ -0.45
TUBE1-205ENST00000603651 PRR20AP86496 221 aa12.27□□□□□ -0.45
TUBE1-205ENST00000603651 NUTM2DQ5VT03 806 aaPredicted RBP12.27□□□□□ -0.45
TUBE1-205ENST00000603651 NUTM2AQ8IVF1 878 aaPredicted RBP12.27□□□□□ -0.45
TUBE1-205ENST00000603651 ZBTB3Q9H5J0 574 aa12.27□□□□□ -0.45
TUBE1-205ENST00000603651 HRCP23327 699 aa12.26□□□□□ -0.45
TUBE1-205ENST00000603651 PTCRAQ6ISU1 281 aaPredicted RBP12.26□□□□□ -0.45
TUBE1-205ENST00000603651 SPDYE5A6NIY4 337 aa12.25□□□□□ -0.45
TUBE1-205ENST00000603651 LCE2BO14633 110 aa12.25□□□□□ -0.45
TUBE1-205ENST00000603651 CFAP99D6REC4 459 aa12.24□□□□□ -0.45
TUBE1-205ENST00000603651 CCNYL3P0C7X3 344 aa12.24□□□□□ -0.45
TUBE1-205ENST00000603651 CYP4X1Q8N118 509 aa12.24□□□□□ -0.45
TUBE1-205ENST00000603651 GJA5P36382 358 aa12.23□□□□□ -0.45
TUBE1-205ENST00000603651 CLK2P49760 499 aaKnown RBP12.23□□□□□ -0.45
TUBE1-205ENST00000603651 QPCTQ16769 361 aa12.23□□□□□ -0.45
TUBE1-205ENST00000603651 CTHP32929 405 aa12.22□□□□□ -0.45
TUBE1-205ENST00000603651 FAM117AQ9C073 453 aa12.22□□□□□ -0.45
TUBE1-205ENST00000603651 TTC24A2A3L6 582 aaPredicted RBP12.21□□□□□ -0.45
TUBE1-205ENST00000603651 PTPRNQ16849 979 aa12.21□□□□□ -0.45
TUBE1-205ENST00000603651 TPRNQ4KMQ1 711 aa12.21□□□□□ -0.45
TUBE1-205ENST00000603651 RSPH6AQ9H0K4 717 aa12.21□□□□□ -0.45
TUBE1-205ENST00000603651 LINC01559Q495D7 138 aa12.2□□□□□ -0.46
TUBE1-205ENST00000603651 DGAT1O75907 488 aa12.19□□□□□ -0.46
TUBE1-205ENST00000603651 SKOR1P84550 965 aa12.19□□□□□ -0.46
TUBE1-205ENST00000603651 PRPF38BQ5VTL8 546 aaKnown RBP12.19□□□□□ -0.46
TUBE1-205ENST00000603651 MRGPRX2Q96LB1 330 aa12.19□□□□□ -0.46
TUBE1-205ENST00000603651 WNT7AO00755 349 aa12.18□□□□□ -0.46
TUBE1-205ENST00000603651 NEUROD2Q15784 382 aa12.18□□□□□ -0.46
TUBE1-205ENST00000603651 RC3H1Q5TC82 1133 aaKnown RBP12.18□□□□□ -0.46
TUBE1-205ENST00000603651 KCNH2Q12809 1159 aa12.17□□□□□ -0.46
TUBE1-205ENST00000603651 RTL5Q5HYW3 569 aaPredicted RBP12.17□□□□□ -0.46
TUBE1-205ENST00000603651 UNC93B1Q9H1C4 597 aa12.17□□□□□ -0.46
TUBE1-205ENST00000603651 EVA1BQ9NVM1 165 aa12.17□□□□□ -0.46
TUBE1-205ENST00000603651 DESI1Q6ICB0 168 aa12.16□□□□□ -0.46
TUBE1-205ENST00000603651 DDRGK1Q96HY6 314 aa12.16□□□□□ -0.46
TUBE1-205ENST00000603651 TOR4AQ9NXH8 423 aa12.16□□□□□ -0.46
TUBE1-205ENST00000603651 LILRB3O75022 631 aa12.15□□□□□ -0.46
TUBE1-205ENST00000603651 MYT1Q01538 1121 aa12.15□□□□□ -0.46
TUBE1-205ENST00000603651 LYPD8Q6UX82 237 aa12.15□□□□□ -0.46
TUBE1-205ENST00000603651 PER1O15534 1290 aaPredicted RBP12.14□□□□□ -0.47
TUBE1-205ENST00000603651 WNT7BP56706 349 aa12.14□□□□□ -0.47
TUBE1-205ENST00000603651 BAP1Q92560 729 aa12.14□□□□□ -0.47
TUBE1-205ENST00000603651 MAP10Q9P2G4 905 aa12.14□□□□□ -0.47
TUBE1-205ENST00000603651 ST8SIA5O15466 376 aa12.13□□□□□ -0.47
TUBE1-205ENST00000603651 PROCA1Q8NCQ7 364 aaPredicted RBP12.13□□□□□ -0.47
TUBE1-205ENST00000603651 EHBP1Q8NDI1 1231 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms