RNA–Protein interactions for RNA: ENST00000602499.5

UBE2E3-207, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2

Gene UBE2E3, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-207ENST00000602499 PRAM1Q96QH2 718 aa31.25■■■□□ 2.59
UBE2E3-207ENST00000602499 TOM1O60784 492 aa31.24■■■□□ 2.59
UBE2E3-207ENST00000602499 PLEKHH1Q9ULM0 1364 aa31.23■■■□□ 2.59
UBE2E3-207ENST00000602499 POGKQ9P215 609 aa31.23■■■□□ 2.59
UBE2E3-207ENST00000602499 ARHGEF28Q8N1W1 1705 aaKnown RBP31.23■■■□□ 2.59
UBE2E3-207ENST00000602499 CARD11Q9BXL7 1154 aa31.22■■■□□ 2.59
UBE2E3-207ENST00000602499 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.21■■■□□ 2.59
UBE2E3-207ENST00000602499 CADPS2Q86UW7 1296 aa31.21■■■□□ 2.59
UBE2E3-207ENST00000602499 NALCNQ8IZF0 1738 aa31.21■■■□□ 2.59
UBE2E3-207ENST00000602499 ATF3P18847 181 aa31.19■■■□□ 2.58
UBE2E3-207ENST00000602499 EIF3AQ14152 1382 aaKnown RBP31.16■■■□□ 2.58
UBE2E3-207ENST00000602499 CDC42BPGQ6DT37 1551 aa31.13■■■□□ 2.57
UBE2E3-207ENST00000602499 CENPJQ9HC77 1338 aaPredicted RBP31.13■■■□□ 2.57
UBE2E3-207ENST00000602499 SAFB2Q14151 953 aaKnown RBP eCLIP31.12■■■□□ 2.57
UBE2E3-207ENST00000602499 ADGRB2O60241 1585 aa31.11■■■□□ 2.57
UBE2E3-207ENST00000602499 HSPA1LP34931 641 aa31.11■■■□□ 2.57
UBE2E3-207ENST00000602499 SLAIN2Q9P270 581 aa31.11■■■□□ 2.57
UBE2E3-207ENST00000602499 MED1Q15648 1581 aaPredicted RBP31.09■■■□□ 2.57
UBE2E3-207ENST00000602499 MST1RQ04912 1400 aa31.07■■■□□ 2.56
UBE2E3-207ENST00000602499 MINK1Q8N4C8 1332 aaPredicted RBP31.05■■■□□ 2.56
UBE2E3-207ENST00000602499 PIP4K2BP78356 416 aa31.04■■■□□ 2.56
UBE2E3-207ENST00000602499 SBNO2Q9Y2G9 1366 aa31.03■■■□□ 2.56
UBE2E3-207ENST00000602499 QRICH2Q9H0J4 1663 aa31.03■■■□□ 2.56
UBE2E3-207ENST00000602499 WASLO00401 505 aaPredicted RBP31.02■■■□□ 2.56
UBE2E3-207ENST00000602499 HIRIP3Q9BW71 556 aaPredicted RBP31.01■■■□□ 2.55
UBE2E3-207ENST00000602499 FMN2Q9NZ56 1722 aa31.01■■■□□ 2.55
UBE2E3-207ENST00000602499 SLC24A1O60721 1099 aa31■■■□□ 2.55
UBE2E3-207ENST00000602499 USP47Q96K76 1375 aa31■■■□□ 2.55
UBE2E3-207ENST00000602499 C1orf167Q5SNV9 1468 aa31■■■□□ 2.55
UBE2E3-207ENST00000602499 SCAF1Q9H7N4 1312 aaKnown RBP30.99■■■□□ 2.55
UBE2E3-207ENST00000602499 ANKARQ7Z5J8 1434 aa30.97■■■□□ 2.55
UBE2E3-207ENST00000602499 ST20-MTHFSA0A0A6YYL1 179 aa30.96■■■□□ 2.55
UBE2E3-207ENST00000602499 CDK19Q9BWU1 502 aa30.94■■■□□ 2.54
UBE2E3-207ENST00000602499 ROBO1Q9Y6N7 1651 aa30.93■■■□□ 2.54
UBE2E3-207ENST00000602499 TULP4Q9NRJ4 1543 aa30.93■■■□□ 2.54
UBE2E3-207ENST00000602499 BRINP3Q76B58 766 aa30.93■■■□□ 2.54
UBE2E3-207ENST00000602499 EVC2Q86UK5 1308 aa30.93■■■□□ 2.54
UBE2E3-207ENST00000602499 TESK2Q96S53 571 aa30.91■■■□□ 2.54
UBE2E3-207ENST00000602499 EIF4G2P78344 907 aaKnown RBP eCLIP30.9■■■□□ 2.54
UBE2E3-207ENST00000602499 ZEB1P37275 1124 aaPredicted RBP30.89■■■□□ 2.54
UBE2E3-207ENST00000602499 NUTM2FA1L443 756 aa30.88■■■□□ 2.53
UBE2E3-207ENST00000602499 ESCO1Q5FWF5 840 aa30.88■■■□□ 2.53
UBE2E3-207ENST00000602499 ORAI2Q96SN7 254 aa30.88■■■□□ 2.53
UBE2E3-207ENST00000602499 USP32Q8NFA0 1604 aa30.87■■■□□ 2.53
UBE2E3-207ENST00000602499 NUDT16Q96DE0 195 aaKnown RBP30.86■■■□□ 2.53
UBE2E3-207ENST00000602499 PRR36Q9H6K5 1346 aa30.85■■■□□ 2.53
UBE2E3-207ENST00000602499 SRPK2P78362 688 aaKnown RBP30.85■■■□□ 2.53
UBE2E3-207ENST00000602499 PUS7Q96PZ0 661 aaKnown RBP30.85■■■□□ 2.53
UBE2E3-207ENST00000602499 RGPD8O14715 1765 aaPredicted RBP30.84■■■□□ 2.53
UBE2E3-207ENST00000602499 ATP7BP35670 1465 aa30.84■■■□□ 2.53
UBE2E3-207ENST00000602499 CCDC61Q9Y6R9 512 aa30.83■■■□□ 2.53
UBE2E3-207ENST00000602499 AHDC1Q5TGY3 1603 aaPredicted RBP30.82■■■□□ 2.52
UBE2E3-207ENST00000602499 KIF1AQ12756 1690 aa30.81■■■□□ 2.52
UBE2E3-207ENST00000602499 CABP2Q9NPB3 220 aa30.81■■■□□ 2.52
UBE2E3-207ENST00000602499 PHF8Q9UPP1 1060 aa30.81■■■□□ 2.52
UBE2E3-207ENST00000602499 HSPA5P11021 654 aaKnown RBP30.8■■■□□ 2.52
UBE2E3-207ENST00000602499 ITSN1Q15811 1721 aa30.8■■■□□ 2.52
UBE2E3-207ENST00000602499 TMF1P82094 1093 aa30.79■■■□□ 2.52
UBE2E3-207ENST00000602499 NHSL1Q5SYE7 1610 aa30.79■■■□□ 2.52
UBE2E3-207ENST00000602499 ATAD2Q6PL18 1390 aa30.78■■■□□ 2.52
UBE2E3-207ENST00000602499 TOPAZ1Q8N9V7 1692 aa30.77■■■□□ 2.52
UBE2E3-207ENST00000602499 NPHP3Q7Z494 1330 aa30.76■■■□□ 2.52
UBE2E3-207ENST00000602499 PLEKHG3A1L390 1219 aa30.76■■■□□ 2.51
UBE2E3-207ENST00000602499 CDCA8Q53HL2 280 aa30.74■■■□□ 2.51
UBE2E3-207ENST00000602499 PHLPP1O60346 1717 aa30.73■■■□□ 2.51
UBE2E3-207ENST00000602499 FOXO3O43524 673 aa30.73■■■□□ 2.51
UBE2E3-207ENST00000602499 SOS2Q07890 1332 aaPredicted RBP30.73■■■□□ 2.51
UBE2E3-207ENST00000602499 PMFBP1Q8TBY8 1022 aa30.71■■■□□ 2.51
UBE2E3-207ENST00000602499 PPIP5K1Q6PFW1 1433 aa30.71■■■□□ 2.51
UBE2E3-207ENST00000602499 POLR3AO14802 1390 aaPredicted RBP30.7■■■□□ 2.51
UBE2E3-207ENST00000602499 COL16A1Q07092 1604 aaPredicted RBP30.69■■■□□ 2.5
UBE2E3-207ENST00000602499 DDX17Q92841 729 aaKnown RBP30.69■■■□□ 2.5
UBE2E3-207ENST00000602499 NGDNQ8NEJ9 315 aaKnown RBP30.68■■■□□ 2.5
UBE2E3-207ENST00000602499 CABP1Q9NZU7 370 aa30.68■■■□□ 2.5
UBE2E3-207ENST00000602499 PXDNQ92626 1479 aa30.67■■■□□ 2.5
UBE2E3-207ENST00000602499 PSME1Q06323 249 aa30.66■■■□□ 2.5
UBE2E3-207ENST00000602499 LRRC59Q96AG4 307 aaKnown RBP30.66■■■□□ 2.5
UBE2E3-207ENST00000602499 PHF23Q9BUL5 403 aaPredicted RBP30.66■■■□□ 2.5
UBE2E3-207ENST00000602499 NINLQ9Y2I6 1382 aa30.66■■■□□ 2.5
UBE2E3-207ENST00000602499 KRT28Q7Z3Y7 464 aa30.65■■■□□ 2.5
UBE2E3-207ENST00000602499 ACEP12821 1306 aa30.65■■■□□ 2.5
UBE2E3-207ENST00000602499 ZNF692Q9BU19 519 aaPredicted RBP30.61■■■□□ 2.49
UBE2E3-207ENST00000602499 RGS17Q9UGC6 210 aaPredicted RBP30.61■■■□□ 2.49
UBE2E3-207ENST00000602499 SBNO1A3KN83 1393 aa30.61■■■□□ 2.49
UBE2E3-207ENST00000602499 BRD4O60885 1362 aaPredicted RBP30.6■■■□□ 2.49
UBE2E3-207ENST00000602499 JCADQ9P266 1359 aa30.59■■■□□ 2.49
UBE2E3-207ENST00000602499 XPCQ01831 940 aaPredicted RBP30.58■■■□□ 2.49
UBE2E3-207ENST00000602499 CPSF1Q10570 1443 aaKnown RBP30.57■■■□□ 2.48
UBE2E3-207ENST00000602499 TMC1Q8TDI8 760 aa30.57■■■□□ 2.48
UBE2E3-207ENST00000602499 SPATA31A3Q5VYP0 1347 aa30.56■■■□□ 2.48
UBE2E3-207ENST00000602499 SLC12A5Q9H2X9 1139 aa30.56■■■□□ 2.48
UBE2E3-207ENST00000602499 TRPM3Q9HCF6 1732 aaPredicted RBP30.54■■■□□ 2.48
UBE2E3-207ENST00000602499 SHPRHQ149N8 1683 aa30.53■■■□□ 2.48
UBE2E3-207ENST00000602499 TERF2IPQ9NYB0 399 aa30.53■■■□□ 2.48
UBE2E3-207ENST00000602499 AKAP12Q02952 1782 aa30.53■■■□□ 2.48
UBE2E3-207ENST00000602499 CD163L1Q9NR16 1453 aa30.52■■■□□ 2.48
UBE2E3-207ENST00000602499 C11orf95C9JLR9 678 aaPredicted RBP30.52■■■□□ 2.48
UBE2E3-207ENST00000602499 USP6P35125 1406 aa30.52■■■□□ 2.48
UBE2E3-207ENST00000602499 TNS3Q68CZ2 1445 aa30.52■■■□□ 2.48
UBE2E3-207ENST00000602499 HDGFL2Q7Z4V5 671 aaPredicted RBP30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms