RNA–Protein interactions for RNA: ENST00000602421.5

MACF1-233, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2 BASIC

Gene MACF1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-233ENST00000602421 CPS1P31327 1500 aa24.65■■□□□ 1.54
MACF1-233ENST00000602421 PANK3Q9H999 370 aa24.64■■□□□ 1.54
MACF1-233ENST00000602421 TULP4Q9NRJ4 1543 aa24.63■■□□□ 1.53
MACF1-233ENST00000602421 ROBO2Q9HCK4 1378 aa24.62■■□□□ 1.53
MACF1-233ENST00000602421 SRPK2P78362 688 aaKnown RBP24.61■■□□□ 1.53
MACF1-233ENST00000602421 CABP2Q9NPB3 220 aa24.61■■□□□ 1.53
MACF1-233ENST00000602421 CDK19Q9BWU1 502 aa24.59■■□□□ 1.53
MACF1-233ENST00000602421 HSPA2P54652 639 aa24.58■■□□□ 1.53
MACF1-233ENST00000602421 TMC1Q8TDI8 760 aa24.58■■□□□ 1.53
MACF1-233ENST00000602421 PTCH1Q13635 1447 aa24.58■■□□□ 1.52
MACF1-233ENST00000602421 PRKRIP1Q9H875 184 aaPredicted RBP24.57■■□□□ 1.52
MACF1-233ENST00000602421 PER1O15534 1290 aaPredicted RBP24.56■■□□□ 1.52
MACF1-233ENST00000602421 ATAD2Q6PL18 1390 aa24.56■■□□□ 1.52
MACF1-233ENST00000602421 CCER2I3L3R5 266 aa24.55■■□□□ 1.52
MACF1-233ENST00000602421 WASLO00401 505 aaPredicted RBP24.54■■□□□ 1.52
MACF1-233ENST00000602421 KCNA6P17658 529 aa24.54■■□□□ 1.52
MACF1-233ENST00000602421 LMTK3Q96Q04 1460 aa24.54■■□□□ 1.52
MACF1-233ENST00000602421 MYOM1P52179 1685 aa24.54■■□□□ 1.52
MACF1-233ENST00000602421 SLC12A5Q9H2X9 1139 aa24.53■■□□□ 1.52
MACF1-233ENST00000602421 KNSTRNQ9Y448 316 aa24.53■■□□□ 1.52
MACF1-233ENST00000602421 XRN1Q8IZH2 1706 aaKnown RBP24.53■■□□□ 1.52
MACF1-233ENST00000602421 CNGB1Q14028 1251 aaPredicted RBP24.52■■□□□ 1.52
MACF1-233ENST00000602421 NINLQ9Y2I6 1382 aa24.52■■□□□ 1.52
MACF1-233ENST00000602421 KTN1Q86UP2 1357 aaKnown RBP24.49■■□□□ 1.51
MACF1-233ENST00000602421 CHD2O14647 1828 aaKnown RBP24.47■■□□□ 1.51
MACF1-233ENST00000602421 RALBP1Q15311 655 aa24.47■■□□□ 1.51
MACF1-233ENST00000602421 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.46■■□□□ 1.51
MACF1-233ENST00000602421 ADGRB2O60241 1585 aa24.45■■□□□ 1.51
MACF1-233ENST00000602421 CC2D1BQ5T0F9 858 aaKnown RBP24.44■■□□□ 1.5
MACF1-233ENST00000602421 CARD14Q9BXL6 1004 aa24.44■■□□□ 1.5
MACF1-233ENST00000602421 ANKRD36BQ8N2N9 1353 aa24.44■■□□□ 1.5
MACF1-233ENST00000602421 TERF2IPQ9NYB0 399 aa24.44■■□□□ 1.5
MACF1-233ENST00000602421 NUDT16Q96DE0 195 aaKnown RBP24.43■■□□□ 1.5
MACF1-233ENST00000602421 CABP1Q9NZU7 370 aa24.43■■□□□ 1.5
MACF1-233ENST00000602421 AMER1Q5JTC6 1135 aaPredicted RBP24.42■■□□□ 1.5
MACF1-233ENST00000602421 HDGFL2Q7Z4V5 671 aaPredicted RBP24.41■■□□□ 1.5
MACF1-233ENST00000602421 NSD3Q9BZ95 1437 aa24.4■■□□□ 1.5
MACF1-233ENST00000602421 NPC1L1Q9UHC9 1359 aa24.4■■□□□ 1.5
MACF1-233ENST00000602421 CCDC61Q9Y6R9 512 aa24.4■■□□□ 1.5
MACF1-233ENST00000602421 PARD3Q8TEW0 1356 aa24.39■■□□□ 1.5
MACF1-233ENST00000602421 NWD1Q149M9 1564 aa24.39■■□□□ 1.49
MACF1-233ENST00000602421 MYBBP1AQ9BQG0 1328 aaKnown RBP24.37■■□□□ 1.49
MACF1-233ENST00000602421 PPIP5K1Q6PFW1 1433 aa24.37■■□□□ 1.49
MACF1-233ENST00000602421 A0A1W2PP64 1363 aa24.37■■□□□ 1.49
MACF1-233ENST00000602421 PROSER2Q86WR7 435 aaPredicted RBP24.36■■□□□ 1.49
MACF1-233ENST00000602421 PRR36Q9H6K5 1346 aa24.36■■□□□ 1.49
MACF1-233ENST00000602421 ATP7BP35670 1465 aa24.35■■□□□ 1.49
MACF1-233ENST00000602421 MRS2Q9HD23 443 aa24.35■■□□□ 1.49
MACF1-233ENST00000602421 CGNL1Q0VF96 1302 aa24.34■■□□□ 1.49
MACF1-233ENST00000602421 NKTRP30414 1462 aaKnown RBP24.34■■□□□ 1.49
MACF1-233ENST00000602421 STRCQ7RTU9 1775 aa24.34■■□□□ 1.49
MACF1-233ENST00000602421 NUTM2FA1L443 756 aa24.34■■□□□ 1.49
MACF1-233ENST00000602421 C14orf37Q86TY3 774 aa24.34■■□□□ 1.49
MACF1-233ENST00000602421 RBM33Q96EV2 1170 aaKnown RBP24.34■■□□□ 1.49
MACF1-233ENST00000602421 CD163L1Q9NR16 1453 aa24.33■■□□□ 1.49
MACF1-233ENST00000602421 YTHDC1Q96MU7 727 aaKnown RBP24.33■■□□□ 1.49
MACF1-233ENST00000602421 ADGRL3Q9HAR2 1447 aa24.31■■□□□ 1.48
MACF1-233ENST00000602421 CCDC184Q52MB2 194 aa24.31■■□□□ 1.48
MACF1-233ENST00000602421 NLRP13Q86W25 1043 aa24.3■■□□□ 1.48
MACF1-233ENST00000602421 PLEKHG3A1L390 1219 aa24.29■■□□□ 1.48
MACF1-233ENST00000602421 ANKARQ7Z5J8 1434 aa24.29■■□□□ 1.48
MACF1-233ENST00000602421 DMRT2Q9Y5R5 561 aa24.28■■□□□ 1.48
MACF1-233ENST00000602421 USP32Q8NFA0 1604 aa24.28■■□□□ 1.48
MACF1-233ENST00000602421 BRD4O60885 1362 aaPredicted RBP24.28■■□□□ 1.48
MACF1-233ENST00000602421 NSD2O96028 1365 aa24.28■■□□□ 1.48
MACF1-233ENST00000602421 ZNF692Q9BU19 519 aaPredicted RBP24.27■■□□□ 1.48
MACF1-233ENST00000602421 CPSF1Q10570 1443 aaKnown RBP24.27■■□□□ 1.48
MACF1-233ENST00000602421 CDC42BPGQ6DT37 1551 aa24.27■■□□□ 1.48
MACF1-233ENST00000602421 MORC1Q86VD1 984 aa24.27■■□□□ 1.48
MACF1-233ENST00000602421 NALCNQ8IZF0 1738 aa24.26■■□□□ 1.47
MACF1-233ENST00000602421 TOPAZ1Q8N9V7 1692 aa24.24■■□□□ 1.47
MACF1-233ENST00000602421 PPP2R1AP30153 589 aa24.24■■□□□ 1.47
MACF1-233ENST00000602421 FMN2Q9NZ56 1722 aa24.24■■□□□ 1.47
MACF1-233ENST00000602421 EDC4Q6P2E9 1401 aaKnown RBP24.23■■□□□ 1.47
MACF1-233ENST00000602421 NCOA3Q9Y6Q9 1424 aa24.23■■□□□ 1.47
MACF1-233ENST00000602421 ACEP12821 1306 aa24.23■■□□□ 1.47
MACF1-233ENST00000602421 TMEM94Q12767 1356 aa24.23■■□□□ 1.47
MACF1-233ENST00000602421 C19orf44Q9H6X5 657 aa24.22■■□□□ 1.47
MACF1-233ENST00000602421 FYB1O15117 783 aa24.21■■□□□ 1.47
MACF1-233ENST00000602421 PMFBP1Q8TBY8 1022 aa24.21■■□□□ 1.47
MACF1-233ENST00000602421 ITSN1Q15811 1721 aa24.2■■□□□ 1.47
MACF1-233ENST00000602421 STRCP1A6NGW2 1772 aa24.2■■□□□ 1.47
MACF1-233ENST00000602421 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.2■■□□□ 1.46
MACF1-233ENST00000602421 NGDNQ8NEJ9 315 aaKnown RBP24.2■■□□□ 1.46
MACF1-233ENST00000602421 GGNBP2Q9H3C7 697 aa24.2■■□□□ 1.46
MACF1-233ENST00000602421 FAM9BQ8IZU0 186 aa24.19■■□□□ 1.46
MACF1-233ENST00000602421 ZNF335Q9H4Z2 1342 aaPredicted RBP24.18■■□□□ 1.46
MACF1-233ENST00000602421 POLR3AO14802 1390 aaPredicted RBP24.17■■□□□ 1.46
MACF1-233ENST00000602421 AKAP12Q02952 1782 aa24.17■■□□□ 1.46
MACF1-233ENST00000602421 ATF3P18847 181 aa24.16■■□□□ 1.46
MACF1-233ENST00000602421 TNNT2P45379 298 aaPredicted RBP24.16■■□□□ 1.46
MACF1-233ENST00000602421 PHF8Q9UPP1 1060 aa24.16■■□□□ 1.46
MACF1-233ENST00000602421 PNISRQ8TF01 805 aaKnown RBP24.15■■□□□ 1.46
MACF1-233ENST00000602421 MON2Q7Z3U7 1717 aa24.15■■□□□ 1.46
MACF1-233ENST00000602421 USP6P35125 1406 aa24.14■■□□□ 1.46
MACF1-233ENST00000602421 RGPD8O14715 1765 aaPredicted RBP24.13■■□□□ 1.45
MACF1-233ENST00000602421 TTC21BQ7Z4L5 1316 aa24.13■■□□□ 1.45
MACF1-233ENST00000602421 ESCO1Q5FWF5 840 aa24.13■■□□□ 1.45
MACF1-233ENST00000602421 DCCP43146 1447 aa24.13■■□□□ 1.45
MACF1-233ENST00000602421 NME9Q86XW9 330 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms