RNA–Protein interactions for RNA: ENST00000602308.1

TRIM11-205, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-205ENST00000602308 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.66■■□□□ 1.22
TRIM11-205ENST00000602308 R3HDM1Q15032 1099 aaKnown RBP22.66■■□□□ 1.22
TRIM11-205ENST00000602308 SLIT2O94813 1529 aa22.66■■□□□ 1.22
TRIM11-205ENST00000602308 KRT27Q7Z3Y8 459 aa22.63■■□□□ 1.21
TRIM11-205ENST00000602308 IFFO2Q5TF58 517 aa22.62■■□□□ 1.21
TRIM11-205ENST00000602308 EN1Q05925 392 aaPredicted RBP22.61■■□□□ 1.21
TRIM11-205ENST00000602308 ANKRD50Q9ULJ7 1429 aa22.6■■□□□ 1.21
TRIM11-205ENST00000602308 ONECUT3O60422 494 aaPredicted RBP22.6■■□□□ 1.21
TRIM11-205ENST00000602308 XPCQ01831 940 aaPredicted RBP22.59■■□□□ 1.21
TRIM11-205ENST00000602308 PXDNQ92626 1479 aa22.59■■□□□ 1.21
TRIM11-205ENST00000602308 E9PCH4 1651 aa22.58■■□□□ 1.21
TRIM11-205ENST00000602308 NPHP3Q7Z494 1330 aa22.58■■□□□ 1.21
TRIM11-205ENST00000602308 ADGRL2O95490 1459 aa22.58■■□□□ 1.2
TRIM11-205ENST00000602308 VPS8Q8N3P4 1428 aa22.57■■□□□ 1.2
TRIM11-205ENST00000602308 VPS72Q15906 364 aa22.56■■□□□ 1.2
TRIM11-205ENST00000602308 ROBO2Q9HCK4 1378 aa22.55■■□□□ 1.2
TRIM11-205ENST00000602308 ESCO1Q5FWF5 840 aa22.55■■□□□ 1.2
TRIM11-205ENST00000602308 FOXO3O43524 673 aa22.54■■□□□ 1.2
TRIM11-205ENST00000602308 IQGAP3Q86VI3 1631 aa22.51■■□□□ 1.19
TRIM11-205ENST00000602308 ZNF326Q5BKZ1 582 aaKnown RBP22.51■■□□□ 1.19
TRIM11-205ENST00000602308 CCDC9Q9Y3X0 531 aaKnown RBP22.5■■□□□ 1.19
TRIM11-205ENST00000602308 EZH2Q15910 746 aaKnown RBP22.47■■□□□ 1.19
TRIM11-205ENST00000602308 USP32Q8NFA0 1604 aa22.46■■□□□ 1.19
TRIM11-205ENST00000602308 FAM182BQ5T319 152 aa22.45■■□□□ 1.18
TRIM11-205ENST00000602308 SENP3-EIF4A1A0A087X0R7 540 aa22.44■■□□□ 1.18
TRIM11-205ENST00000602308 A0A0G2JS52 829 aa22.44■■□□□ 1.18
TRIM11-205ENST00000602308 DISP2A7MBM2 1401 aa22.44■■□□□ 1.18
TRIM11-205ENST00000602308 MYT1Q01538 1121 aa22.44■■□□□ 1.18
TRIM11-205ENST00000602308 SPATA31A3Q5VYP0 1347 aa22.44■■□□□ 1.18
TRIM11-205ENST00000602308 LRPPRCP42704 1394 aaKnown RBP22.42■■□□□ 1.18
TRIM11-205ENST00000602308 FAM98CQ17RN3 349 aaKnown RBP22.42■■□□□ 1.18
TRIM11-205ENST00000602308 RGPD1P0DJD0 1748 aa22.41■■□□□ 1.18
TRIM11-205ENST00000602308 NEXMIFQ5QGS0 1516 aa22.41■■□□□ 1.18
TRIM11-205ENST00000602308 CABLES1Q8TDN4 633 aa22.4■■□□□ 1.18
TRIM11-205ENST00000602308 CAMKK2Q96RR4 588 aa22.4■■□□□ 1.18
TRIM11-205ENST00000602308 HFM1A2PYH4 1435 aa22.4■■□□□ 1.18
TRIM11-205ENST00000602308 PRAG1Q86YV5 1406 aa22.4■■□□□ 1.18
TRIM11-205ENST00000602308 ZNF784Q8NCA9 323 aaPredicted RBP22.39■■□□□ 1.17
TRIM11-205ENST00000602308 NUTM2FA1L443 756 aa22.38■■□□□ 1.17
TRIM11-205ENST00000602308 DCAF8L1A6NGE4 600 aa22.38■■□□□ 1.17
TRIM11-205ENST00000602308 PLCH1Q4KWH8 1693 aa22.37■■□□□ 1.17
TRIM11-205ENST00000602308 CDC42BPGQ6DT37 1551 aa22.37■■□□□ 1.17
TRIM11-205ENST00000602308 NWD2Q9ULI1 1742 aa22.37■■□□□ 1.17
TRIM11-205ENST00000602308 HAP1P54257 671 aaPredicted RBP22.36■■□□□ 1.17
TRIM11-205ENST00000602308 TNS1Q9HBL0 1735 aaKnown RBP22.35■■□□□ 1.17
TRIM11-205ENST00000602308 NUP155O75694 1391 aa22.35■■□□□ 1.17
TRIM11-205ENST00000602308 FAM83GA6ND36 823 aa22.34■■□□□ 1.17
TRIM11-205ENST00000602308 PLEKHG5O94827 1062 aa22.34■■□□□ 1.17
TRIM11-205ENST00000602308 FAM50AQ14320 339 aaKnown RBP22.33■■□□□ 1.17
TRIM11-205ENST00000602308 KRT28Q7Z3Y7 464 aa22.33■■□□□ 1.17
TRIM11-205ENST00000602308 PPP1R1BQ9UD71 204 aaPredicted RBP22.33■■□□□ 1.17
TRIM11-205ENST00000602308 NINLQ9Y2I6 1382 aa22.32■■□□□ 1.16
TRIM11-205ENST00000602308 C1QTNF8P60827 252 aa22.31■■□□□ 1.16
TRIM11-205ENST00000602308 UTRNP46939 3433 aa22.31■■□□□ 1.16
TRIM11-205ENST00000602308 SPON1Q9HCB6 807 aa22.3■■□□□ 1.16
TRIM11-205ENST00000602308 CCDC144AA2RUR9 1427 aa22.3■■□□□ 1.16
TRIM11-205ENST00000602308 NAIPQ13075 1403 aa22.3■■□□□ 1.16
TRIM11-205ENST00000602308 TRIM37O94972 964 aa22.29■■□□□ 1.16
TRIM11-205ENST00000602308 CAMTA1Q9Y6Y1 1673 aa22.29■■□□□ 1.16
TRIM11-205ENST00000602308 KCNQ2O43526 872 aa22.27■■□□□ 1.16
TRIM11-205ENST00000602308 TNS3Q68CZ2 1445 aa22.27■■□□□ 1.16
TRIM11-205ENST00000602308 VGFO15240 615 aaPredicted RBP22.26■■□□□ 1.15
TRIM11-205ENST00000602308 APBA3O96018 575 aa22.26■■□□□ 1.15
TRIM11-205ENST00000602308 BTG4Q9NY30 223 aa22.26■■□□□ 1.15
TRIM11-205ENST00000602308 NRAPQ86VF7 1730 aa22.26■■□□□ 1.15
TRIM11-205ENST00000602308 PARD3Q8TEW0 1356 aa22.25■■□□□ 1.15
TRIM11-205ENST00000602308 ADGRB2O60241 1585 aa22.25■■□□□ 1.15
TRIM11-205ENST00000602308 WAPLQ7Z5K2 1190 aa22.24■■□□□ 1.15
TRIM11-205ENST00000602308 CLTCL1P53675 1640 aa22.24■■□□□ 1.15
TRIM11-205ENST00000602308 NBPF8Q3BBV2 869 aa22.23■■□□□ 1.15
TRIM11-205ENST00000602308 NBPF14Q5TI25 921 aa22.23■■□□□ 1.15
TRIM11-205ENST00000602308 SPATA31A5Q5VU36 1347 aa22.23■■□□□ 1.15
TRIM11-205ENST00000602308 SPATA31A7Q8IWB4 1347 aa22.23■■□□□ 1.15
TRIM11-205ENST00000602308 APLP2Q06481 763 aa22.22■■□□□ 1.15
TRIM11-205ENST00000602308 THSD7AQ9UPZ6 1657 aa22.21■■□□□ 1.15
TRIM11-205ENST00000602308 ABCA3Q99758 1704 aa22.21■■□□□ 1.15
TRIM11-205ENST00000602308 LMOD2Q6P5Q4 547 aa22.21■■□□□ 1.15
TRIM11-205ENST00000602308 FAM196AQ6ZSG2 479 aa22.21■■□□□ 1.15
TRIM11-205ENST00000602308 RREB1Q92766 1687 aa22.2■■□□□ 1.15
TRIM11-205ENST00000602308 PSME1Q06323 249 aa22.2■■□□□ 1.14
TRIM11-205ENST00000602308 KIF1AQ12756 1690 aa22.2■■□□□ 1.14
TRIM11-205ENST00000602308 NUP188Q5SRE5 1749 aa22.19■■□□□ 1.14
TRIM11-205ENST00000602308 SBNO1A3KN83 1393 aa22.18■■□□□ 1.14
TRIM11-205ENST00000602308 CEP350Q5VT06 3117 aa22.17■■□□□ 1.14
TRIM11-205ENST00000602308 PLEKHH1Q9ULM0 1364 aa22.17■■□□□ 1.14
TRIM11-205ENST00000602308 ARHGEF10O15013 1369 aa22.16■■□□□ 1.14
TRIM11-205ENST00000602308 ROCK1Q13464 1354 aa22.16■■□□□ 1.14
TRIM11-205ENST00000602308 PHF8Q9UPP1 1060 aa22.16■■□□□ 1.14
TRIM11-205ENST00000602308 FMN2Q9NZ56 1722 aa22.15■■□□□ 1.14
TRIM11-205ENST00000602308 STK26Q9P289 416 aa22.15■■□□□ 1.14
TRIM11-205ENST00000602308 KIF1BO60333 1816 aa22.12■■□□□ 1.13
TRIM11-205ENST00000602308 TECPR2O15040 1411 aa22.12■■□□□ 1.13
TRIM11-205ENST00000602308 LOC105371045A0A1W2PR82 267 aa22.11■■□□□ 1.13
TRIM11-205ENST00000602308 RPGRIP1LQ68CZ1 1315 aa22.1■■□□□ 1.13
TRIM11-205ENST00000602308 COL14A1Q05707 1796 aaKnown RBP22.1■■□□□ 1.13
TRIM11-205ENST00000602308 NRXN1Q9ULB1 1477 aa22.09■■□□□ 1.13
TRIM11-205ENST00000602308 SPATA31A1Q5TZJ5 1347 aa22.08■■□□□ 1.13
TRIM11-205ENST00000602308 RRBP1Q9P2E9 1410 aaKnown RBP22.08■■□□□ 1.13
TRIM11-205ENST00000602308 NRKQ7Z2Y5 1582 aa22.07■■□□□ 1.12
TRIM11-205ENST00000602308 RGPD8O14715 1765 aaPredicted RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms