RNA–Protein interactions for RNA: ENST00000602015.5

FARP1-238, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-238	ENST00000602015	USB1	Q9BQ65	265 aa	Known RBP	11.07	□□□□□ -0.64
FARP1-238	ENST00000602015	GPCPD1	Q9NPB8	672 aa		11.07	□□□□□ -0.64
FARP1-238	ENST00000602015	PRDM9	Q9NQV7	894 aa		11.07	□□□□□ -0.64
FARP1-238	ENST00000602015	CYP4X1	Q8N118	509 aa		11.06	□□□□□ -0.64
FARP1-238	ENST00000602015	KRI1	Q8N9T8	703 aa	Known RBP	11.06	□□□□□ -0.64
FARP1-238	ENST00000602015	CCDC102A	Q96A19	550 aa		11.06	□□□□□ -0.64
FARP1-238	ENST00000602015	TOR4A	Q9NXH8	423 aa		11.04	□□□□□ -0.64
FARP1-238	ENST00000602015	HOXA2	O43364	376 aa		11.02	□□□□□ -0.65
FARP1-238	ENST00000602015	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.02	□□□□□ -0.65
FARP1-238	ENST00000602015	CRIPAK	Q8N1N5	446 aa		11.02	□□□□□ -0.65
FARP1-238	ENST00000602015	DXO	O77932	396 aa	Known RBP	11.01	□□□□□ -0.65
FARP1-238	ENST00000602015	CTC1	Q2NKJ3	1217 aa		11.01	□□□□□ -0.65
FARP1-238	ENST00000602015	AAAS	Q9NRG9	546 aa		11.01	□□□□□ -0.65
FARP1-238	ENST00000602015	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.01	□□□□□ -0.65
FARP1-238	ENST00000602015	AVP	P01185	164 aa		11	□□□□□ -0.65
FARP1-238	ENST00000602015	NUTM1	Q86Y26	1132 aa		11	□□□□□ -0.65
FARP1-238	ENST00000602015	ZNF775	Q96BV0	537 aa	Predicted RBP	11	□□□□□ -0.65
FARP1-238	ENST00000602015	TTC24	A2A3L6	582 aa	Predicted RBP	10.99	□□□□□ -0.65
FARP1-238	ENST00000602015	WNT7A	O00755	349 aa		10.99	□□□□□ -0.65
FARP1-238	ENST00000602015	TRIM32	Q13049	653 aa		10.99	□□□□□ -0.65
FARP1-238	ENST00000602015	REPIN1	Q9BWE0	567 aa	Known RBP	10.97	□□□□□ -0.65
FARP1-238	ENST00000602015	ST8SIA5	O15466	376 aa		10.96	□□□□□ -0.65
FARP1-238	ENST00000602015	SNIP1	Q8TAD8	396 aa	Known RBP	10.96	□□□□□ -0.65
FARP1-238	ENST00000602015	AXIN1	O15169	862 aa		10.95	□□□□□ -0.66
FARP1-238	ENST00000602015	SMCP	P49901	116 aa	Predicted RBP	10.95	□□□□□ -0.66
FARP1-238	ENST00000602015	CCDC24	Q8N4L8	307 aa		10.94	□□□□□ -0.66
FARP1-238	ENST00000602015	POTEC	B2RU33	542 aa		10.93	□□□□□ -0.66
FARP1-238	ENST00000602015	JUND	P17535	347 aa		10.93	□□□□□ -0.66
FARP1-238	ENST00000602015	WNT7B	P56706	349 aa		10.93	□□□□□ -0.66
FARP1-238	ENST00000602015	RETREG3	Q86VR2	466 aa		10.93	□□□□□ -0.66
FARP1-238	ENST00000602015	HLA-C	Q95604	372 aa		10.93	□□□□□ -0.66
FARP1-238	ENST00000602015	BARGIN	Q6ZT62	677 aa		10.92	□□□□□ -0.66
FARP1-238	ENST00000602015	SSTR3	P32745	418 aa	Predicted RBP	10.91	□□□□□ -0.66
FARP1-238	ENST00000602015	MRGPRX2	Q96LB1	330 aa		10.91	□□□□□ -0.66
FARP1-238	ENST00000602015	FDX1	P10109	184 aa		10.9	□□□□□ -0.66
FARP1-238	ENST00000602015	ZMYND10	O75800	440 aa		10.89	□□□□□ -0.67
FARP1-238	ENST00000602015	GUCA2A	Q02747	115 aa		10.89	□□□□□ -0.67
FARP1-238	ENST00000602015	SMPD1	P17405	629 aa		10.88	□□□□□ -0.67
FARP1-238	ENST00000602015	TTLL12	Q14166	644 aa	Predicted RBP	10.88	□□□□□ -0.67
FARP1-238	ENST00000602015	C6orf229	H3BNL8	230 aa		10.87	□□□□□ -0.67
FARP1-238	ENST00000602015	AMHR2	Q16671	573 aa		10.87	□□□□□ -0.67
FARP1-238	ENST00000602015	RC3H1	Q5TC82	1133 aa	Known RBP	10.87	□□□□□ -0.67
FARP1-238	ENST00000602015	NUDT12	Q9BQG2	462 aa		10.87	□□□□□ -0.67
FARP1-238	ENST00000602015	SYMPK	Q92797	1274 aa	Known RBP	10.86	□□□□□ -0.67
FARP1-238	ENST00000602015	C11orf95	C9JLR9	678 aa	Predicted RBP	10.85	□□□□□ -0.67
FARP1-238	ENST00000602015	DIXDC1	Q155Q3	683 aa		10.85	□□□□□ -0.67
FARP1-238	ENST00000602015	SPIRE2	Q8WWL2	714 aa		10.85	□□□□□ -0.67
FARP1-238	ENST00000602015	SPDYE5	A6NIY4	337 aa		10.84	□□□□□ -0.67
FARP1-238	ENST00000602015	MS4A1	P11836	297 aa		10.84	□□□□□ -0.67
FARP1-238	ENST00000602015	ZC3H15	Q8WU90	426 aa	Known RBP	10.84	□□□□□ -0.67
FARP1-238	ENST00000602015	DACH1	Q9UI36	760 aa		10.84	□□□□□ -0.67
FARP1-238	ENST00000602015	GMPR2	Q9P2T1	348 aa	Known RBP	10.83	□□□□□ -0.68
FARP1-238	ENST00000602015	PCDHGC3	Q9UN70	934 aa		10.83	□□□□□ -0.68
FARP1-238	ENST00000602015		J3QL48	77 aa		10.82	□□□□□ -0.68
FARP1-238	ENST00000602015	CCNYL3	P0C7X3	344 aa		10.82	□□□□□ -0.68
FARP1-238	ENST00000602015	SKOR1	P84550	965 aa		10.82	□□□□□ -0.68
FARP1-238	ENST00000602015	TREML4	Q6UXN2	200 aa		10.82	□□□□□ -0.68
FARP1-238	ENST00000602015	GJA5	P36382	358 aa		10.81	□□□□□ -0.68
FARP1-238	ENST00000602015	PTPRN	Q16849	979 aa		10.81	□□□□□ -0.68
FARP1-238	ENST00000602015	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.81	□□□□□ -0.68
FARP1-238	ENST00000602015	SENP2	Q9HC62	589 aa		10.81	□□□□□ -0.68
FARP1-238	ENST00000602015	DESI1	Q6ICB0	168 aa		10.8	□□□□□ -0.68
FARP1-238	ENST00000602015	MOXD2P	A6NHM9	499 aa		10.79	□□□□□ -0.68
FARP1-238	ENST00000602015	MTMR2	Q13614	643 aa		10.79	□□□□□ -0.68
FARP1-238	ENST00000602015	EHBP1	Q8NDI1	1231 aa		10.79	□□□□□ -0.68
FARP1-238	ENST00000602015	ATP13A2	Q9NQ11	1180 aa		10.79	□□□□□ -0.68
FARP1-238	ENST00000602015	NDUFV2	P19404	249 aa		10.78	□□□□□ -0.68
FARP1-238	ENST00000602015	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.78	□□□□□ -0.68
FARP1-238	ENST00000602015	BEGAIN	Q9BUH8	593 aa		10.78	□□□□□ -0.68
FARP1-238	ENST00000602015	EVA1B	Q9NVM1	165 aa		10.78	□□□□□ -0.68
FARP1-238	ENST00000602015	ALDH1A1	P00352	501 aa		10.77	□□□□□ -0.69
FARP1-238	ENST00000602015	PRR7	Q8TB68	274 aa		10.77	□□□□□ -0.69
FARP1-238	ENST00000602015	HPS1	Q92902	700 aa		10.77	□□□□□ -0.69
FARP1-238	ENST00000602015	KIFC2	Q96AC6	838 aa		10.77	□□□□□ -0.69
FARP1-238	ENST00000602015	KCNH2	Q12809	1159 aa		10.75	□□□□□ -0.69
FARP1-238	ENST00000602015	AK7	Q96M32	723 aa		10.75	□□□□□ -0.69
FARP1-238	ENST00000602015	SIAH2	O43255	324 aa		10.74	□□□□□ -0.69
FARP1-238	ENST00000602015	TRIM47	Q96LD4	638 aa		10.74	□□□□□ -0.69
FARP1-238	ENST00000602015	TBC1D2	Q9BYX2	928 aa		10.74	□□□□□ -0.69
FARP1-238	ENST00000602015	UNC93B1	Q9H1C4	597 aa		10.74	□□□□□ -0.69
FARP1-238	ENST00000602015	WASF2	Q9Y6W5	498 aa		10.74	□□□□□ -0.69
FARP1-238	ENST00000602015	WFS1	O76024	890 aa		10.73	□□□□□ -0.69
FARP1-238	ENST00000602015	SH3BP2	P78314	561 aa		10.73	□□□□□ -0.69
FARP1-238	ENST00000602015	TRIM66	O15016	1216 aa		10.72	□□□□□ -0.69
FARP1-238	ENST00000602015	LCE2A	Q5TA79	106 aa	Predicted RBP	10.72	□□□□□ -0.69
FARP1-238	ENST00000602015	PLEKHG3	A1L390	1219 aa		10.71	□□□□□ -0.69
FARP1-238	ENST00000602015	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.71	□□□□□ -0.69
FARP1-238	ENST00000602015	PARP9	Q8IXQ6	854 aa		10.71	□□□□□ -0.69
FARP1-238	ENST00000602015	VARS	P26640	1264 aa	Known RBP	10.7	□□□□□ -0.7
FARP1-238	ENST00000602015	SPTLC1	O15269	473 aa		10.69	□□□□□ -0.7
FARP1-238	ENST00000602015	PRPF38B	Q5VTL8	546 aa	Known RBP	10.69	□□□□□ -0.7
FARP1-238	ENST00000602015	MPND	Q8N594	471 aa		10.69	□□□□□ -0.7
FARP1-238	ENST00000602015	BAP1	Q92560	729 aa		10.69	□□□□□ -0.7
FARP1-238	ENST00000602015	ZBTB3	Q9H5J0	574 aa		10.69	□□□□□ -0.7
FARP1-238	ENST00000602015	LYPD8	Q6UX82	237 aa		10.68	□□□□□ -0.7
FARP1-238	ENST00000602015	ZNF511	Q8NB15	262 aa		10.68	□□□□□ -0.7
FARP1-238	ENST00000602015	SNRPB	P14678	240 aa	Known RBP	10.67	□□□□□ -0.7
FARP1-238	ENST00000602015	CAPN5	O15484	640 aa	Predicted RBP	10.66	□□□□□ -0.7
FARP1-238	ENST00000602015	CTH	P32929	405 aa		10.66	□□□□□ -0.7
FARP1-238	ENST00000602015	NFX1	Q12986	1120 aa	Known RBP	10.66	□□□□□ -0.7

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