RNA–Protein interactions for RNA: ENST00000601953.5

CAPN12-212, Transcript of calpain 12, humanhuman

TSL 5 BASIC

Gene CAPN12, Length 2,381 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-212ENST00000601953 ZC3H13Q5T200 1668 aaKnown RBP28.74■■■□□ 2.19
CAPN12-212ENST00000601953 FAM161AQ3B820 660 aa28.71■■■□□ 2.19
CAPN12-212ENST00000601953 GLI2P10070 1586 aa28.71■■■□□ 2.19
CAPN12-212ENST00000601953 KDM2BQ8NHM5 1336 aa28.71■■■□□ 2.19
CAPN12-212ENST00000601953 QRICH2Q9H0J4 1663 aa28.7■■■□□ 2.19
CAPN12-212ENST00000601953 ZNF521Q96K83 1311 aa28.7■■■□□ 2.18
CAPN12-212ENST00000601953 TRAK1Q9UPV9 953 aa28.69■■■□□ 2.18
CAPN12-212ENST00000601953 PLEKHH1Q9ULM0 1364 aa28.69■■■□□ 2.18
CAPN12-212ENST00000601953 CRBNQ96SW2 442 aa28.69■■■□□ 2.18
CAPN12-212ENST00000601953 NEXMIFQ5QGS0 1516 aa28.68■■■□□ 2.18
CAPN12-212ENST00000601953 SKAP1Q86WV1 359 aa28.67■■■□□ 2.18
CAPN12-212ENST00000601953 VGFO15240 615 aaPredicted RBP28.66■■■□□ 2.18
CAPN12-212ENST00000601953 C8orf34Q49A92 452 aa28.66■■■□□ 2.18
CAPN12-212ENST00000601953 YEATS2Q9ULM3 1422 aa28.66■■■□□ 2.18
CAPN12-212ENST00000601953 CENPQQ7L2Z9 268 aaPredicted RBP28.65■■■□□ 2.18
CAPN12-212ENST00000601953 TMEM132EQ6IEE7 984 aa28.64■■■□□ 2.18
CAPN12-212ENST00000601953 ZFYVE9O95405 1425 aa28.62■■■□□ 2.17
CAPN12-212ENST00000601953 PUS7Q96PZ0 661 aaKnown RBP28.62■■■□□ 2.17
CAPN12-212ENST00000601953 PLIN1O60240 522 aa28.61■■■□□ 2.17
CAPN12-212ENST00000601953 RRAGDQ9NQL2 400 aaPredicted RBP28.61■■■□□ 2.17
CAPN12-212ENST00000601953 SLC52A1Q9NWF4 448 aa28.61■■■□□ 2.17
CAPN12-212ENST00000601953 L1TD1Q5T7N2 865 aaKnown RBP28.61■■■□□ 2.17
CAPN12-212ENST00000601953 DUSP27Q5VZP5 1158 aa28.61■■■□□ 2.17
CAPN12-212ENST00000601953 GOLGA2Q08379 1002 aa28.6■■■□□ 2.17
CAPN12-212ENST00000601953 POLR3AO14802 1390 aaPredicted RBP28.59■■■□□ 2.17
CAPN12-212ENST00000601953 IDI1Q13907 227 aa28.59■■■□□ 2.17
CAPN12-212ENST00000601953 NSD3Q9BZ95 1437 aa28.58■■■□□ 2.17
CAPN12-212ENST00000601953 ARHGEF28Q8N1W1 1705 aaKnown RBP28.57■■■□□ 2.16
CAPN12-212ENST00000601953 USP32Q8NFA0 1604 aa28.57■■■□□ 2.16
CAPN12-212ENST00000601953 NGEFQ8N5V2 710 aa28.55■■■□□ 2.16
CAPN12-212ENST00000601953 SLC12A5Q9H2X9 1139 aa28.55■■■□□ 2.16
CAPN12-212ENST00000601953 PREX1Q8TCU6 1659 aa28.54■■■□□ 2.16
CAPN12-212ENST00000601953 SLFN5Q08AF3 891 aa28.54■■■□□ 2.16
CAPN12-212ENST00000601953 CYB5RLQ6IPT4 315 aa28.54■■■□□ 2.16
CAPN12-212ENST00000601953 TRMT2AQ8IZ69 625 aaKnown RBP28.54■■■□□ 2.16
CAPN12-212ENST00000601953 EVC2Q86UK5 1308 aa28.52■■■□□ 2.16
CAPN12-212ENST00000601953 CCDC146Q8IYE0 955 aa28.52■■■□□ 2.16
CAPN12-212ENST00000601953 TULP4Q9NRJ4 1543 aa28.51■■■□□ 2.16
CAPN12-212ENST00000601953 ZMYND15Q9H091 742 aa28.51■■■□□ 2.15
CAPN12-212ENST00000601953 TMEM131LA2VDJ0 1609 aa28.51■■■□□ 2.15
CAPN12-212ENST00000601953 NUTM2DQ5VT03 806 aaPredicted RBP28.51■■■□□ 2.15
CAPN12-212ENST00000601953 POGKQ9P215 609 aa28.51■■■□□ 2.15
CAPN12-212ENST00000601953 APAF1O14727 1248 aa28.5■■■□□ 2.15
CAPN12-212ENST00000601953 MORC1Q86VD1 984 aa28.5■■■□□ 2.15
CAPN12-212ENST00000601953 RRP9O43818 475 aaKnown RBP28.49■■■□□ 2.15
CAPN12-212ENST00000601953 DIP2BQ9P265 1576 aa28.47■■■□□ 2.15
CAPN12-212ENST00000601953 VSIG10Q8N0Z9 540 aa28.47■■■□□ 2.15
CAPN12-212ENST00000601953 CGNL1Q0VF96 1302 aa28.46■■■□□ 2.15
CAPN12-212ENST00000601953 ANKRD36BQ8N2N9 1353 aa28.46■■■□□ 2.15
CAPN12-212ENST00000601953 MYO5BQ9ULV0 1848 aa28.46■■■□□ 2.15
CAPN12-212ENST00000601953 C20orf194Q5TEA3 1177 aa28.45■■■□□ 2.14
CAPN12-212ENST00000601953 SHPRHQ149N8 1683 aa28.45■■■□□ 2.14
CAPN12-212ENST00000601953 REREQ9P2R6 1566 aa28.44■■■□□ 2.14
CAPN12-212ENST00000601953 FAM69CQ0P6D2 419 aa28.44■■■□□ 2.14
CAPN12-212ENST00000601953 RIMBP3CA6NJZ7 1639 aa28.44■■■□□ 2.14
CAPN12-212ENST00000601953 RIMBP3BA6NNM3 1639 aa28.44■■■□□ 2.14
CAPN12-212ENST00000601953 RIMBP3Q9UFD9 1639 aa28.44■■■□□ 2.14
CAPN12-212ENST00000601953 NSD2O96028 1365 aa28.43■■■□□ 2.14
CAPN12-212ENST00000601953 HSP90AA2PQ14568 343 aaPredicted RBP28.43■■■□□ 2.14
CAPN12-212ENST00000601953 CLCN1P35523 988 aa28.43■■■□□ 2.14
CAPN12-212ENST00000601953 NKTRP30414 1462 aaKnown RBP28.42■■■□□ 2.14
CAPN12-212ENST00000601953 E9PSI1 815 aa28.42■■■□□ 2.14
CAPN12-212ENST00000601953 PNNQ9H307 717 aaKnown RBP28.42■■■□□ 2.14
CAPN12-212ENST00000601953 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.41■■■□□ 2.14
CAPN12-212ENST00000601953 NINLQ9Y2I6 1382 aa28.4■■■□□ 2.14
CAPN12-212ENST00000601953 AGLP35573 1532 aa28.4■■■□□ 2.14
CAPN12-212ENST00000601953 SPINK5Q9NQ38 1064 aaPredicted RBP28.4■■■□□ 2.14
CAPN12-212ENST00000601953 HSP90AA1P07900 732 aaKnown RBP28.39■■■□□ 2.14
CAPN12-212ENST00000601953 PPP6R1Q9UPN7 881 aa28.39■■■□□ 2.14
CAPN12-212ENST00000601953 NAP1L5Q96NT1 182 aaPredicted RBP28.39■■■□□ 2.14
CAPN12-212ENST00000601953 VIRMAQ69YN4 1812 aaKnown RBP28.38■■■□□ 2.13
CAPN12-212ENST00000601953 PTPRMP28827 1452 aa28.38■■■□□ 2.13
CAPN12-212ENST00000601953 BECN1Q14457 450 aa28.37■■■□□ 2.13
CAPN12-212ENST00000601953 CABP2Q9NPB3 220 aa28.36■■■□□ 2.13
CAPN12-212ENST00000601953 FBXO31Q5XUX0 539 aaPredicted RBP28.36■■■□□ 2.13
CAPN12-212ENST00000601953 USP19O94966 1318 aa28.35■■■□□ 2.13
CAPN12-212ENST00000601953 TNNT2P45379 298 aaPredicted RBP28.34■■■□□ 2.13
CAPN12-212ENST00000601953 YTHDC2Q9H6S0 1430 aaKnown RBP28.33■■■□□ 2.13
CAPN12-212ENST00000601953 MTHFSP49914 203 aa28.33■■■□□ 2.13
CAPN12-212ENST00000601953 WWC1Q8IX03 1113 aa28.33■■■□□ 2.13
CAPN12-212ENST00000601953 RUNDC1Q96C34 613 aa28.33■■■□□ 2.13
CAPN12-212ENST00000601953 CFAP53Q96M91 514 aa28.32■■■□□ 2.12
CAPN12-212ENST00000601953 STK26Q9P289 416 aa28.32■■■□□ 2.12
CAPN12-212ENST00000601953 IQSEC2Q5JU85 1478 aa28.32■■■□□ 2.12
CAPN12-212ENST00000601953 FSD2A1L4K1 749 aa28.31■■■□□ 2.12
CAPN12-212ENST00000601953 RGS3P49796 1198 aa28.31■■■□□ 2.12
CAPN12-212ENST00000601953 DMRT2Q9Y5R5 561 aa28.31■■■□□ 2.12
CAPN12-212ENST00000601953 ABCC11Q96J66 1382 aa28.31■■■□□ 2.12
CAPN12-212ENST00000601953 CLTCQ00610 1675 aaKnown RBP28.31■■■□□ 2.12
CAPN12-212ENST00000601953 SAFB2Q14151 953 aaKnown RBP eCLIP28.3■■■□□ 2.12
CAPN12-212ENST00000601953 ATAD2Q6PL18 1390 aa28.3■■■□□ 2.12
CAPN12-212ENST00000601953 ALKQ9UM73 1620 aa28.3■■■□□ 2.12
CAPN12-212ENST00000601953 XRCC6P12956 609 aaKnown RBP eCLIP28.3■■■□□ 2.12
CAPN12-212ENST00000601953 A0A1W2PP64 1363 aa28.29■■■□□ 2.12
CAPN12-212ENST00000601953 TSPOAP1O95153 1857 aa28.29■■■□□ 2.12
CAPN12-212ENST00000601953 PHF23Q9BUL5 403 aaPredicted RBP28.29■■■□□ 2.12
CAPN12-212ENST00000601953 GOLGA6L3A6NEY3 463 aa28.28■■■□□ 2.12
CAPN12-212ENST00000601953 ANTXR1Q9H6X2 564 aa28.28■■■□□ 2.12
CAPN12-212ENST00000601953 SRPK2P78362 688 aaKnown RBP28.27■■■□□ 2.12
CAPN12-212ENST00000601953 NCBP3Q53F19 620 aaKnown RBP28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms