RNA–Protein interactions for RNA: ENST00000601582.1

SYMPK-216, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-216ENST00000601582 C14orf93Q9H972 538 aaKnown RBP17.25■□□□□ 0.35
SYMPK-216ENST00000601582 PNPLA6Q8IY17 1366 aa17.25■□□□□ 0.35
SYMPK-216ENST00000601582 ABCC11Q96J66 1382 aa17.25■□□□□ 0.35
SYMPK-216ENST00000601582 CFAP70Q5T0N1 1121 aa17.24■□□□□ 0.35
SYMPK-216ENST00000601582 SOS2Q07890 1332 aaPredicted RBP17.23■□□□□ 0.35
SYMPK-216ENST00000601582 YTHDC2Q9H6S0 1430 aaKnown RBP17.23■□□□□ 0.35
SYMPK-216ENST00000601582 LAMC1P11047 1609 aa17.23■□□□□ 0.35
SYMPK-216ENST00000601582 NUTM2FA1L443 756 aa17.23■□□□□ 0.35
SYMPK-216ENST00000601582 ESCO1Q5FWF5 840 aa17.23■□□□□ 0.35
SYMPK-216ENST00000601582 ZNF772Q68DY9 489 aaPredicted RBP17.23■□□□□ 0.35
SYMPK-216ENST00000601582 KNDC1Q76NI1 1749 aa17.22■□□□□ 0.35
SYMPK-216ENST00000601582 NRXN1Q9ULB1 1477 aa17.22■□□□□ 0.35
SYMPK-216ENST00000601582 CDC42BPGQ6DT37 1551 aa17.22■□□□□ 0.35
SYMPK-216ENST00000601582 MYOM2P54296 1465 aa17.2■□□□□ 0.34
SYMPK-216ENST00000601582 HRCP23327 699 aa17.2■□□□□ 0.34
SYMPK-216ENST00000601582 AFF2P51816 1311 aa17.2■□□□□ 0.34
SYMPK-216ENST00000601582 SIRT1Q96EB6 747 aa17.19■□□□□ 0.34
SYMPK-216ENST00000601582 C8orf37Q96NL8 207 aa17.19■□□□□ 0.34
SYMPK-216ENST00000601582 DHX57Q6P158 1386 aaKnown RBP17.18■□□□□ 0.34
SYMPK-216ENST00000601582 FOXO3O43524 673 aa17.18■□□□□ 0.34
SYMPK-216ENST00000601582 KDM2AQ9Y2K7 1162 aa17.18■□□□□ 0.34
SYMPK-216ENST00000601582 ADAMTS2O95450 1211 aa17.17■□□□□ 0.34
SYMPK-216ENST00000601582 XPCQ01831 940 aaPredicted RBP17.17■□□□□ 0.34
SYMPK-216ENST00000601582 RXRBP28702 533 aa17.16■□□□□ 0.34
SYMPK-216ENST00000601582 DCAF11Q8TEB1 546 aa17.16■□□□□ 0.34
SYMPK-216ENST00000601582 NPHP3Q7Z494 1330 aa17.16■□□□□ 0.34
SYMPK-216ENST00000601582 SAFB2Q14151 953 aaKnown RBP eCLIP17.15■□□□□ 0.34
SYMPK-216ENST00000601582 PRAM1Q96QH2 718 aa17.15■□□□□ 0.34
SYMPK-216ENST00000601582 FMN2Q9NZ56 1722 aa17.15■□□□□ 0.34
SYMPK-216ENST00000601582 PXDNQ92626 1479 aa17.14■□□□□ 0.33
SYMPK-216ENST00000601582 NGLY1Q96IV0 654 aa17.14■□□□□ 0.33
SYMPK-216ENST00000601582 RGPD8O14715 1765 aaPredicted RBP17.13■□□□□ 0.33
SYMPK-216ENST00000601582 QTRT2Q9H974 415 aaKnown RBP17.13■□□□□ 0.33
SYMPK-216ENST00000601582 ADGRB1O14514 1584 aa17.11■□□□□ 0.33
SYMPK-216ENST00000601582 COL22A1Q8NFW1 1626 aaPredicted RBP17.11■□□□□ 0.33
SYMPK-216ENST00000601582 POGKQ9P215 609 aa17.11■□□□□ 0.33
SYMPK-216ENST00000601582 TRAK1Q9UPV9 953 aa17.11■□□□□ 0.33
SYMPK-216ENST00000601582 DLC1Q96QB1 1528 aa17.09■□□□□ 0.33
SYMPK-216ENST00000601582 KRT28Q7Z3Y7 464 aa17.08■□□□□ 0.32
SYMPK-216ENST00000601582 PHF8Q9UPP1 1060 aa17.08■□□□□ 0.32
SYMPK-216ENST00000601582 KIF1AQ12756 1690 aa17.07■□□□□ 0.32
SYMPK-216ENST00000601582 RBM6P78332 1123 aaKnown RBP17.07■□□□□ 0.32
SYMPK-216ENST00000601582 STAC3Q96MF2 364 aa17.07■□□□□ 0.32
SYMPK-216ENST00000601582 HIRIP3Q9BW71 556 aaPredicted RBP17.07■□□□□ 0.32
SYMPK-216ENST00000601582 USP21Q9UK80 565 aa17.07■□□□□ 0.32
SYMPK-216ENST00000601582 CDK12Q9NYV4 1490 aaPredicted RBP17.06■□□□□ 0.32
SYMPK-216ENST00000601582 SPATA31A3Q5VYP0 1347 aa17.06■□□□□ 0.32
SYMPK-216ENST00000601582 FNBP4Q8N3X1 1017 aaPredicted RBP17.06■□□□□ 0.32
SYMPK-216ENST00000601582 UPF1Q92900 1129 aaKnown RBP eCLIP17.06■□□□□ 0.32
SYMPK-216ENST00000601582 MINK1Q8N4C8 1332 aaPredicted RBP17.05■□□□□ 0.32
SYMPK-216ENST00000601582 USP32Q8NFA0 1604 aa17.04■□□□□ 0.32
SYMPK-216ENST00000601582 PMFBP1Q8TBY8 1022 aa17.04■□□□□ 0.32
SYMPK-216ENST00000601582 MARF1Q9Y4F3 1742 aaKnown RBP17.04■□□□□ 0.32
SYMPK-216ENST00000601582 RGS12O14924 1447 aa17.03■□□□□ 0.32
SYMPK-216ENST00000601582 PSME1Q06323 249 aa17.02■□□□□ 0.32
SYMPK-216ENST00000601582 TRPC5Q9UL62 973 aaPredicted RBP17.02■□□□□ 0.32
SYMPK-216ENST00000601582 ADGRB2O60241 1585 aa17.02■□□□□ 0.31
SYMPK-216ENST00000601582 PLEKHG5O94827 1062 aa17.01■□□□□ 0.31
SYMPK-216ENST00000601582 PRR36Q9H6K5 1346 aa17■□□□□ 0.31
SYMPK-216ENST00000601582 BCL9LQ86UU0 1499 aa17■□□□□ 0.31
SYMPK-216ENST00000601582 WASLO00401 505 aaPredicted RBP17■□□□□ 0.31
SYMPK-216ENST00000601582 ATRNO75882 1429 aa17■□□□□ 0.31
SYMPK-216ENST00000601582 ANKARQ7Z5J8 1434 aa17■□□□□ 0.31
SYMPK-216ENST00000601582 CABLES1Q8TDN4 633 aa17■□□□□ 0.31
SYMPK-216ENST00000601582 TNS3Q68CZ2 1445 aa16.99■□□□□ 0.31
SYMPK-216ENST00000601582 LMOD2Q6P5Q4 547 aa16.99■□□□□ 0.31
SYMPK-216ENST00000601582 ARHGEF28Q8N1W1 1705 aaKnown RBP16.99■□□□□ 0.31
SYMPK-216ENST00000601582 SBNO1A3KN83 1393 aa16.98■□□□□ 0.31
SYMPK-216ENST00000601582 NBPF1Q3BBV0 1214 aa16.97■□□□□ 0.31
SYMPK-216ENST00000601582 TULP4Q9NRJ4 1543 aa16.96■□□□□ 0.3
SYMPK-216ENST00000601582 HAP1P54257 671 aaPredicted RBP16.95■□□□□ 0.3
SYMPK-216ENST00000601582 UNC5CLQ8IV45 518 aa16.94■□□□□ 0.3
SYMPK-216ENST00000601582 GJD4Q96KN9 370 aaPredicted RBP16.94■□□□□ 0.3
SYMPK-216ENST00000601582 SLIT2O94813 1529 aa16.94■□□□□ 0.3
SYMPK-216ENST00000601582 TRPM3Q9HCF6 1732 aaPredicted RBP16.93■□□□□ 0.3
SYMPK-216ENST00000601582 KIAA1210Q9ULL0 1709 aa16.93■□□□□ 0.3
SYMPK-216ENST00000601582 EIF3AQ14152 1382 aaKnown RBP16.93■□□□□ 0.3
SYMPK-216ENST00000601582 SIN3AQ96ST3 1273 aa16.93■□□□□ 0.3
SYMPK-216ENST00000601582 ARHGEF10O15013 1369 aa16.92■□□□□ 0.3
SYMPK-216ENST00000601582 NGDNQ8NEJ9 315 aaKnown RBP16.92■□□□□ 0.3
SYMPK-216ENST00000601582 NUDT16Q96DE0 195 aaKnown RBP16.92■□□□□ 0.3
SYMPK-216ENST00000601582 CDK19Q9BWU1 502 aa16.92■□□□□ 0.3
SYMPK-216ENST00000601582 ABCA3Q99758 1704 aa16.92■□□□□ 0.3
SYMPK-216ENST00000601582 GPRASP1Q5JY77 1395 aa16.91■□□□□ 0.3
SYMPK-216ENST00000601582 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.91■□□□□ 0.3
SYMPK-216ENST00000601582 L3MBTL2Q969R5 705 aa16.91■□□□□ 0.3
SYMPK-216ENST00000601582 FAM83GA6ND36 823 aa16.9■□□□□ 0.3
SYMPK-216ENST00000601582 ATP7BP35670 1465 aa16.9■□□□□ 0.3
SYMPK-216ENST00000601582 ALS2Q96Q42 1657 aa16.9■□□□□ 0.3
SYMPK-216ENST00000601582 PAK3O75914 559 aaPredicted RBP16.89■□□□□ 0.29
SYMPK-216ENST00000601582 GLI3P10071 1580 aa16.89■□□□□ 0.29
SYMPK-216ENST00000601582 ATAD2Q6PL18 1390 aa16.89■□□□□ 0.29
SYMPK-216ENST00000601582 RALGAPBQ86X10 1494 aa16.88■□□□□ 0.29
SYMPK-216ENST00000601582 NEUROD1Q13562 356 aa16.88■□□□□ 0.29
SYMPK-216ENST00000601582 PLCH1Q4KWH8 1693 aa16.88■□□□□ 0.29
SYMPK-216ENST00000601582 ITSN1Q15811 1721 aa16.87■□□□□ 0.29
SYMPK-216ENST00000601582 NWD2Q9ULI1 1742 aa16.85■□□□□ 0.29
SYMPK-216ENST00000601582 VPS72Q15906 364 aa16.85■□□□□ 0.29
SYMPK-216ENST00000601582 CCDC61Q9Y6R9 512 aa16.85■□□□□ 0.29
SYMPK-216ENST00000601582 NBPF8Q3BBV2 869 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms