RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 APAF1O14727 1248 aa13.9□□□□□ -0.18
ZNF558-207ENST00000601372 NAIPQ13075 1403 aa13.9□□□□□ -0.18
ZNF558-207ENST00000601372 ELL2O00472 640 aaPredicted RBP13.9□□□□□ -0.18
ZNF558-207ENST00000601372 KCNJ4P48050 445 aa13.9□□□□□ -0.19
ZNF558-207ENST00000601372 UBAP1LF5GYI3 381 aa13.89□□□□□ -0.19
ZNF558-207ENST00000601372 PRDM11Q9NQV5 511 aa13.89□□□□□ -0.19
ZNF558-207ENST00000601372 GORABQ5T7V8 394 aa13.89□□□□□ -0.19
ZNF558-207ENST00000601372 TRAPPC8Q9Y2L5 1435 aa13.89□□□□□ -0.19
ZNF558-207ENST00000601372 MAP3K1Q13233 1512 aa13.88□□□□□ -0.19
ZNF558-207ENST00000601372 NCKAP5LQ9HCH0 1330 aa13.88□□□□□ -0.19
ZNF558-207ENST00000601372 FOXD4L1Q9NU39 408 aa13.88□□□□□ -0.19
ZNF558-207ENST00000601372 C11orf95C9JLR9 678 aaPredicted RBP13.88□□□□□ -0.19
ZNF558-207ENST00000601372 NAP1L2Q9ULW6 460 aaPredicted RBP13.88□□□□□ -0.19
ZNF558-207ENST00000601372 DUOX2Q9NRD8 1548 aa13.88□□□□□ -0.19
ZNF558-207ENST00000601372 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
ZNF558-207ENST00000601372 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.87□□□□□ -0.19
ZNF558-207ENST00000601372 COG6Q9Y2V7 657 aa13.87□□□□□ -0.19
ZNF558-207ENST00000601372 CENPQQ7L2Z9 268 aaPredicted RBP13.87□□□□□ -0.19
ZNF558-207ENST00000601372 DDX54Q8TDD1 881 aaKnown RBP13.87□□□□□ -0.19
ZNF558-207ENST00000601372 ZC3H6P61129 1189 aaKnown RBP13.86□□□□□ -0.19
ZNF558-207ENST00000601372 ABCC10Q5T3U5 1492 aa13.86□□□□□ -0.19
ZNF558-207ENST00000601372 MAPKBP1O60336 1514 aa13.86□□□□□ -0.19
ZNF558-207ENST00000601372 DCAF8L1A6NGE4 600 aa13.86□□□□□ -0.19
ZNF558-207ENST00000601372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.86□□□□□ -0.19
ZNF558-207ENST00000601372 NUDT16Q96DE0 195 aaKnown RBP13.86□□□□□ -0.19
ZNF558-207ENST00000601372 SLC12A5Q9H2X9 1139 aa13.86□□□□□ -0.19
ZNF558-207ENST00000601372 PTMAP06454 111 aaKnown RBP13.85□□□□□ -0.19
ZNF558-207ENST00000601372 NCOA1Q15788 1441 aa13.85□□□□□ -0.19
ZNF558-207ENST00000601372 FRAT2O75474 233 aaPredicted RBP13.85□□□□□ -0.19
ZNF558-207ENST00000601372 FGD1P98174 961 aa13.85□□□□□ -0.19
ZNF558-207ENST00000601372 GLIPR1L2Q4G1C9 344 aa13.84□□□□□ -0.19
ZNF558-207ENST00000601372 RIPK4P57078 832 aa13.84□□□□□ -0.19
ZNF558-207ENST00000601372 PPP1R1BQ9UD71 204 aaPredicted RBP13.84□□□□□ -0.19
ZNF558-207ENST00000601372 TATP17735 454 aaPredicted RBP13.84□□□□□ -0.19
ZNF558-207ENST00000601372 ADAMTS8Q9UP79 889 aa13.84□□□□□ -0.19
ZNF558-207ENST00000601372 FAM161AQ3B820 660 aa13.84□□□□□ -0.19
ZNF558-207ENST00000601372 TULP1O00294 542 aaPredicted RBP13.83□□□□□ -0.19
ZNF558-207ENST00000601372 TOM1O60784 492 aa13.83□□□□□ -0.2
ZNF558-207ENST00000601372 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.2
ZNF558-207ENST00000601372 MSH6P52701 1360 aa13.83□□□□□ -0.2
ZNF558-207ENST00000601372 CFAP74Q9C0B2 1584 aa13.83□□□□□ -0.2
ZNF558-207ENST00000601372 NOS1P29475 1434 aa13.82□□□□□ -0.2
ZNF558-207ENST00000601372 E9PSI1 815 aa13.82□□□□□ -0.2
ZNF558-207ENST00000601372 NGLY1Q96IV0 654 aa13.82□□□□□ -0.2
ZNF558-207ENST00000601372 FOXO3O43524 673 aa13.82□□□□□ -0.2
ZNF558-207ENST00000601372 PLCB2Q00722 1185 aa13.82□□□□□ -0.2
ZNF558-207ENST00000601372 UHRF1BP1LA0JNW5 1464 aa13.82□□□□□ -0.2
ZNF558-207ENST00000601372 TSPYL4Q9UJ04 414 aa13.81□□□□□ -0.2
ZNF558-207ENST00000601372 BRD4O60885 1362 aaPredicted RBP13.81□□□□□ -0.2
ZNF558-207ENST00000601372 PLEKHO1Q53GL0 409 aaPredicted RBP13.81□□□□□ -0.2
ZNF558-207ENST00000601372 ADGRF5Q8IZF2 1346 aa13.81□□□□□ -0.2
ZNF558-207ENST00000601372 ZMYM3Q14202 1370 aa13.81□□□□□ -0.2
ZNF558-207ENST00000601372 CFAP43Q8NDM7 1665 aa13.8□□□□□ -0.2
ZNF558-207ENST00000601372 CFAP65Q6ZU64 1925 aaKnown RBP13.8□□□□□ -0.2
ZNF558-207ENST00000601372 MTHFSP49914 203 aa13.8□□□□□ -0.2
ZNF558-207ENST00000601372 L1TD1Q5T7N2 865 aaKnown RBP13.8□□□□□ -0.2
ZNF558-207ENST00000601372 HDAC5Q9UQL6 1122 aa13.8□□□□□ -0.2
ZNF558-207ENST00000601372 ATP10AO60312 1499 aa13.8□□□□□ -0.2
ZNF558-207ENST00000601372 DNAJC5Q9H3Z4 198 aa13.79□□□□□ -0.2
ZNF558-207ENST00000601372 UHRF1BP1Q6BDS2 1440 aa13.79□□□□□ -0.2
ZNF558-207ENST00000601372 MYO5CQ9NQX4 1742 aa13.79□□□□□ -0.2
ZNF558-207ENST00000601372 NEXNQ0ZGT2 675 aa13.79□□□□□ -0.2
ZNF558-207ENST00000601372 RRS1Q15050 365 aaKnown RBP13.79□□□□□ -0.2
ZNF558-207ENST00000601372 DNTTIP2Q5QJE6 756 aaKnown RBP13.79□□□□□ -0.2
ZNF558-207ENST00000601372 LRPPRCP42704 1394 aaKnown RBP13.78□□□□□ -0.2
ZNF558-207ENST00000601372 FBXW7Q969H0 707 aa13.78□□□□□ -0.2
ZNF558-207ENST00000601372 PHF8Q9UPP1 1060 aa13.78□□□□□ -0.2
ZNF558-207ENST00000601372 PANK1Q8TE04 598 aa13.78□□□□□ -0.2
ZNF558-207ENST00000601372 CCDC61Q9Y6R9 512 aa13.78□□□□□ -0.2
ZNF558-207ENST00000601372 KRT28Q7Z3Y7 464 aa13.77□□□□□ -0.2
ZNF558-207ENST00000601372 ATAD2Q6PL18 1390 aa13.77□□□□□ -0.2
ZNF558-207ENST00000601372 AIMP1Q12904 312 aaKnown RBP13.77□□□□□ -0.21
ZNF558-207ENST00000601372 LMTK3Q96Q04 1460 aa13.77□□□□□ -0.21
ZNF558-207ENST00000601372 CADPS2Q86UW7 1296 aa13.77□□□□□ -0.21
ZNF558-207ENST00000601372 CABP4P57796 275 aa13.77□□□□□ -0.21
ZNF558-207ENST00000601372 ZCCHC11Q5TAX3 1644 aaKnown RBP13.77□□□□□ -0.21
ZNF558-207ENST00000601372 ZFYVE16Q7Z3T8 1539 aa13.76□□□□□ -0.21
ZNF558-207ENST00000601372 GPATCH3Q96I76 525 aa13.76□□□□□ -0.21
ZNF558-207ENST00000601372 RIMS2Q9UQ26 1411 aa13.76□□□□□ -0.21
ZNF558-207ENST00000601372 PNISRQ8TF01 805 aaKnown RBP13.76□□□□□ -0.21
ZNF558-207ENST00000601372 SPG7Q9UQ90 795 aa13.76□□□□□ -0.21
ZNF558-207ENST00000601372 PPP2R1AP30153 589 aa13.76□□□□□ -0.21
ZNF558-207ENST00000601372 RUNDC1Q96C34 613 aa13.76□□□□□ -0.21
ZNF558-207ENST00000601372 PTPRKQ15262 1439 aa13.76□□□□□ -0.21
ZNF558-207ENST00000601372 FAM177BA6PVY3 158 aa13.75□□□□□ -0.21
ZNF558-207ENST00000601372 DDX58O95786 925 aaKnown RBP13.75□□□□□ -0.21
ZNF558-207ENST00000601372 NOL8Q76FK4 1167 aaKnown RBP13.75□□□□□ -0.21
ZNF558-207ENST00000601372 C9orf78Q9NZ63 289 aaPredicted RBP13.75□□□□□ -0.21
ZNF558-207ENST00000601372 KCNH5Q8NCM2 988 aa13.74□□□□□ -0.21
ZNF558-207ENST00000601372 ATP7AQ04656 1500 aa13.74□□□□□ -0.21
ZNF558-207ENST00000601372 GAS2L2Q8NHY3 880 aa13.74□□□□□ -0.21
ZNF558-207ENST00000601372 WASLO00401 505 aaPredicted RBP13.74□□□□□ -0.21
ZNF558-207ENST00000601372 HMMRO75330 724 aa13.74□□□□□ -0.21
ZNF558-207ENST00000601372 ZKSCAN2Q63HK3 967 aa13.73□□□□□ -0.21
ZNF558-207ENST00000601372 SULT6B1Q6IMI4 303 aa13.73□□□□□ -0.21
ZNF558-207ENST00000601372 ANKRD45Q5TZF3 282 aa13.73□□□□□ -0.21
ZNF558-207ENST00000601372 RIC3Q7Z5B4 369 aa13.73□□□□□ -0.21
ZNF558-207ENST00000601372 SAMD9Q5K651 1589 aa13.73□□□□□ -0.21
ZNF558-207ENST00000601372 FOXD4L5Q5VV16 416 aaPredicted RBP13.72□□□□□ -0.21
ZNF558-207ENST00000601372 FOXD4L4Q8WXT5 416 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms