RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 USP32Q8NFA0 1604 aa18.82■□□□□ 0.6
SMG9-211ENST00000601170 TNNT2P45379 298 aaPredicted RBP18.82■□□□□ 0.6
SMG9-211ENST00000601170 RTL5Q5HYW3 569 aaPredicted RBP18.82■□□□□ 0.6
SMG9-211ENST00000601170 WWC1Q8IX03 1113 aa18.81■□□□□ 0.6
SMG9-211ENST00000601170 PIK3C2BO00750 1634 aa18.8■□□□□ 0.6
SMG9-211ENST00000601170 ARHGEF28Q8N1W1 1705 aaKnown RBP18.8■□□□□ 0.6
SMG9-211ENST00000601170 OSCARQ8IYS5 282 aa18.79■□□□□ 0.6
SMG9-211ENST00000601170 NEXMIFQ5QGS0 1516 aa18.78■□□□□ 0.6
SMG9-211ENST00000601170 NUTM2DQ5VT03 806 aaPredicted RBP18.77■□□□□ 0.6
SMG9-211ENST00000601170 DDRGK1Q96HY6 314 aa18.77■□□□□ 0.6
SMG9-211ENST00000601170 IQSEC2Q5JU85 1478 aa18.77■□□□□ 0.6
SMG9-211ENST00000601170 TULP4Q9NRJ4 1543 aa18.77■□□□□ 0.59
SMG9-211ENST00000601170 FAM161AQ3B820 660 aa18.76■□□□□ 0.59
SMG9-211ENST00000601170 RUNDC1Q96C34 613 aa18.76■□□□□ 0.59
SMG9-211ENST00000601170 LAS1LQ9Y4W2 734 aaKnown RBP18.76■□□□□ 0.59
SMG9-211ENST00000601170 CGNL1Q0VF96 1302 aa18.76■□□□□ 0.59
SMG9-211ENST00000601170 RAPGEF3O95398 923 aa18.76■□□□□ 0.59
SMG9-211ENST00000601170 NEUROD2Q15784 382 aa18.76■□□□□ 0.59
SMG9-211ENST00000601170 DIP2CQ9Y2E4 1556 aa18.76■□□□□ 0.59
SMG9-211ENST00000601170 NEO1Q92859 1461 aa18.75■□□□□ 0.59
SMG9-211ENST00000601170 C8orf34Q49A92 452 aa18.75■□□□□ 0.59
SMG9-211ENST00000601170 RRP7AQ9Y3A4 280 aaKnown RBP18.75■□□□□ 0.59
SMG9-211ENST00000601170 NINLQ9Y2I6 1382 aa18.74■□□□□ 0.59
SMG9-211ENST00000601170 EVC2Q86UK5 1308 aa18.74■□□□□ 0.59
SMG9-211ENST00000601170 VGFO15240 615 aaPredicted RBP18.74■□□□□ 0.59
SMG9-211ENST00000601170 RGS3P49796 1198 aa18.74■□□□□ 0.59
SMG9-211ENST00000601170 MTHFSP49914 203 aa18.74■□□□□ 0.59
SMG9-211ENST00000601170 PDE3AQ14432 1141 aa18.74■□□□□ 0.59
SMG9-211ENST00000601170 TCP11L2Q8N4U5 519 aa18.74■□□□□ 0.59
SMG9-211ENST00000601170 ANKRD36BQ8N2N9 1353 aa18.73■□□□□ 0.59
SMG9-211ENST00000601170 CANXP27824 592 aaKnown RBP18.73■□□□□ 0.59
SMG9-211ENST00000601170 PUS7Q96PZ0 661 aaKnown RBP18.73■□□□□ 0.59
SMG9-211ENST00000601170 CFAP53Q96M91 514 aa18.71■□□□□ 0.59
SMG9-211ENST00000601170 PHF23Q9BUL5 403 aaPredicted RBP18.71■□□□□ 0.59
SMG9-211ENST00000601170 NSD2O96028 1365 aa18.7■□□□□ 0.58
SMG9-211ENST00000601170 ARHGAP31Q2M1Z3 1444 aa18.7■□□□□ 0.58
SMG9-211ENST00000601170 IGHDP01880 384 aa18.7■□□□□ 0.58
SMG9-211ENST00000601170 PANK1Q8TE04 598 aa18.7■□□□□ 0.58
SMG9-211ENST00000601170 CABP2Q9NPB3 220 aa18.7■□□□□ 0.58
SMG9-211ENST00000601170 RICTORQ6R327 1708 aa18.69■□□□□ 0.58
SMG9-211ENST00000601170 NEFMP07197 916 aa18.69■□□□□ 0.58
SMG9-211ENST00000601170 COG6Q9Y2V7 657 aa18.69■□□□□ 0.58
SMG9-211ENST00000601170 CLUAP1Q96AJ1 413 aa18.69■□□□□ 0.58
SMG9-211ENST00000601170 PPM1GO15355 546 aaPredicted RBP18.68■□□□□ 0.58
SMG9-211ENST00000601170 IDI1Q13907 227 aa18.68■□□□□ 0.58
SMG9-211ENST00000601170 WDR63Q8IWG1 891 aa18.68■□□□□ 0.58
SMG9-211ENST00000601170 FRAT1Q92837 279 aaPredicted RBP18.68■□□□□ 0.58
SMG9-211ENST00000601170 MYO5BQ9ULV0 1848 aa18.68■□□□□ 0.58
SMG9-211ENST00000601170 SAFB2Q14151 953 aaKnown RBP eCLIP18.68■□□□□ 0.58
SMG9-211ENST00000601170 RARSP54136 660 aaKnown RBP18.67■□□□□ 0.58
SMG9-211ENST00000601170 VIRMAQ69YN4 1812 aaKnown RBP18.67■□□□□ 0.58
SMG9-211ENST00000601170 CCDC27Q2M243 656 aa18.67■□□□□ 0.58
SMG9-211ENST00000601170 USP35Q9P2H5 1018 aa18.66■□□□□ 0.58
SMG9-211ENST00000601170 ZFYVE9O95405 1425 aa18.65■□□□□ 0.58
SMG9-211ENST00000601170 ADGRB2O60241 1585 aa18.64■□□□□ 0.58
SMG9-211ENST00000601170 A0A1W2PP64 1363 aa18.64■□□□□ 0.57
SMG9-211ENST00000601170 YEATS2Q9ULM3 1422 aa18.64■□□□□ 0.57
SMG9-211ENST00000601170 U2AF1L5P0DN76 240 aaPredicted RBP18.64■□□□□ 0.57
SMG9-211ENST00000601170 U2AF1Q01081 240 aaKnown RBP eCLIP18.64■□□□□ 0.57
SMG9-211ENST00000601170 SENP3Q9H4L4 574 aaPredicted RBP18.64■□□□□ 0.57
SMG9-211ENST00000601170 STK26Q9P289 416 aa18.64■□□□□ 0.57
SMG9-211ENST00000601170 PREX1Q8TCU6 1659 aa18.64■□□□□ 0.57
SMG9-211ENST00000601170 SLC4A3P48751 1232 aa18.63■□□□□ 0.57
SMG9-211ENST00000601170 SLC52A1Q9NWF4 448 aa18.63■□□□□ 0.57
SMG9-211ENST00000601170 ABCC11Q96J66 1382 aa18.63■□□□□ 0.57
SMG9-211ENST00000601170 TMEM131LA2VDJ0 1609 aa18.63■□□□□ 0.57
SMG9-211ENST00000601170 SRPK2P78362 688 aaKnown RBP18.62■□□□□ 0.57
SMG9-211ENST00000601170 BCL2L13Q9BXK5 485 aa18.62■□□□□ 0.57
SMG9-211ENST00000601170 DAXXQ9UER7 740 aaPredicted RBP18.62■□□□□ 0.57
SMG9-211ENST00000601170 PTPRMP28827 1452 aa18.61■□□□□ 0.57
SMG9-211ENST00000601170 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
SMG9-211ENST00000601170 TNNQ9UQP3 1299 aa18.61■□□□□ 0.57
SMG9-211ENST00000601170 RLBP1P12271 317 aa18.6■□□□□ 0.57
SMG9-211ENST00000601170 MYH16Q9H6N6 1097 aa18.6■□□□□ 0.57
SMG9-211ENST00000601170 MAPK8IP3Q9UPT6 1336 aa18.6■□□□□ 0.57
SMG9-211ENST00000601170 ANKRD26Q9UPS8 1709 aa18.59■□□□□ 0.57
SMG9-211ENST00000601170 GGNBP2Q9H3C7 697 aa18.59■□□□□ 0.57
SMG9-211ENST00000601170 CLTCQ00610 1675 aaKnown RBP18.58■□□□□ 0.57
SMG9-211ENST00000601170 AAMPQ13685 434 aa18.58■□□□□ 0.56
SMG9-211ENST00000601170 PMFBP1Q8TBY8 1022 aa18.57■□□□□ 0.56
SMG9-211ENST00000601170 ATAD2Q6PL18 1390 aa18.57■□□□□ 0.56
SMG9-211ENST00000601170 MINK1Q8N4C8 1332 aaPredicted RBP18.57■□□□□ 0.56
SMG9-211ENST00000601170 COL3A1P02461 1466 aaPredicted RBP18.57■□□□□ 0.56
SMG9-211ENST00000601170 PRAM1Q96QH2 718 aa18.56■□□□□ 0.56
SMG9-211ENST00000601170 YTHDC2Q9H6S0 1430 aaKnown RBP18.56■□□□□ 0.56
SMG9-211ENST00000601170 U2SURPO15042 1029 aaKnown RBP18.56■□□□□ 0.56
SMG9-211ENST00000601170 PCDHB15Q9Y5E8 787 aa18.56■□□□□ 0.56
SMG9-211ENST00000601170 CD163L1Q9NR16 1453 aa18.55■□□□□ 0.56
SMG9-211ENST00000601170 PLEKHF1Q96S99 279 aa18.54■□□□□ 0.56
SMG9-211ENST00000601170 TERF2IPQ9NYB0 399 aa18.54■□□□□ 0.56
SMG9-211ENST00000601170 POGKQ9P215 609 aa18.54■□□□□ 0.56
SMG9-211ENST00000601170 NLRP1Q9C000 1473 aa18.54■□□□□ 0.56
SMG9-211ENST00000601170 FYB1O15117 783 aa18.54■□□□□ 0.56
SMG9-211ENST00000601170 TSR2Q969E8 191 aaKnown RBP18.54■□□□□ 0.56
SMG9-211ENST00000601170 MED14O60244 1454 aa18.53■□□□□ 0.56
SMG9-211ENST00000601170 NFKBIBQ15653 356 aa18.53■□□□□ 0.56
SMG9-211ENST00000601170 USP19O94966 1318 aa18.53■□□□□ 0.56
SMG9-211ENST00000601170 RIMBP3CA6NJZ7 1639 aa18.53■□□□□ 0.56
SMG9-211ENST00000601170 RIMBP3BA6NNM3 1639 aa18.53■□□□□ 0.56
SMG9-211ENST00000601170 RIMBP3Q9UFD9 1639 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms