RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 USP21Q9UK80 565 aa12.5□□□□□ -0.41
CCDC9-206ENST00000601154 PRAG1Q86YV5 1406 aa12.49□□□□□ -0.41
CCDC9-206ENST00000601154 ADGRF5Q8IZF2 1346 aa12.49□□□□□ -0.41
CCDC9-206ENST00000601154 CCDC144AA2RUR9 1427 aa12.48□□□□□ -0.41
CCDC9-206ENST00000601154 PPLO60437 1756 aa12.48□□□□□ -0.41
CCDC9-206ENST00000601154 LAMC1P11047 1609 aa12.48□□□□□ -0.41
CCDC9-206ENST00000601154 NPHP3Q7Z494 1330 aa12.47□□□□□ -0.41
CCDC9-206ENST00000601154 WAPLQ7Z5K2 1190 aa12.47□□□□□ -0.41
CCDC9-206ENST00000601154 CDC42BPGQ6DT37 1551 aa12.47□□□□□ -0.41
CCDC9-206ENST00000601154 FOXO3O43524 673 aa12.46□□□□□ -0.41
CCDC9-206ENST00000601154 TMEM132EQ6IEE7 984 aa12.46□□□□□ -0.41
CCDC9-206ENST00000601154 TRPC5Q9UL62 973 aaPredicted RBP12.46□□□□□ -0.41
CCDC9-206ENST00000601154 PLEKHH1Q9ULM0 1364 aa12.45□□□□□ -0.42
CCDC9-206ENST00000601154 MYOM2P54296 1465 aa12.45□□□□□ -0.42
CCDC9-206ENST00000601154 PXDNQ92626 1479 aa12.45□□□□□ -0.42
CCDC9-206ENST00000601154 ATAD2Q6PL18 1390 aa12.44□□□□□ -0.42
CCDC9-206ENST00000601154 FNBP4Q8N3X1 1017 aaPredicted RBP12.44□□□□□ -0.42
CCDC9-206ENST00000601154 SPATA31E1Q6ZUB1 1445 aa12.44□□□□□ -0.42
CCDC9-206ENST00000601154 LRPPRCP42704 1394 aaKnown RBP12.43□□□□□ -0.42
CCDC9-206ENST00000601154 MPHOSPH9Q99550 1183 aa12.43□□□□□ -0.42
CCDC9-206ENST00000601154 COL22A1Q8NFW1 1626 aaPredicted RBP12.43□□□□□ -0.42
CCDC9-206ENST00000601154 TECPR2O15040 1411 aa12.43□□□□□ -0.42
CCDC9-206ENST00000601154 ATRNO75882 1429 aa12.43□□□□□ -0.42
CCDC9-206ENST00000601154 ANKRD30BQ9BXX2 1392 aa12.43□□□□□ -0.42
CCDC9-206ENST00000601154 PLEKHG5O94827 1062 aa12.42□□□□□ -0.42
CCDC9-206ENST00000601154 PIK3C2GO75747 1445 aa12.41□□□□□ -0.42
CCDC9-206ENST00000601154 ABCC11Q96J66 1382 aa12.41□□□□□ -0.42
CCDC9-206ENST00000601154 BCL9LQ86UU0 1499 aa12.4□□□□□ -0.42
CCDC9-206ENST00000601154 YTHDC2Q9H6S0 1430 aaKnown RBP12.4□□□□□ -0.42
CCDC9-206ENST00000601154 SAFB2Q14151 953 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCDC9-206ENST00000601154 IFT172Q9UG01 1749 aa12.38□□□□□ -0.43
CCDC9-206ENST00000601154 HAP1P54257 671 aaPredicted RBP12.38□□□□□ -0.43
CCDC9-206ENST00000601154 GJD4Q96KN9 370 aaPredicted RBP12.38□□□□□ -0.43
CCDC9-206ENST00000601154 SPATA31A3Q5VYP0 1347 aa12.37□□□□□ -0.43
CCDC9-206ENST00000601154 KNDC1Q76NI1 1749 aa12.37□□□□□ -0.43
CCDC9-206ENST00000601154 CFAP70Q5T0N1 1121 aa12.37□□□□□ -0.43
CCDC9-206ENST00000601154 KRT28Q7Z3Y7 464 aa12.37□□□□□ -0.43
CCDC9-206ENST00000601154 FMN2Q9NZ56 1722 aa12.37□□□□□ -0.43
CCDC9-206ENST00000601154 LMOD2Q6P5Q4 547 aa12.36□□□□□ -0.43
CCDC9-206ENST00000601154 CABLES1Q8TDN4 633 aa12.36□□□□□ -0.43
CCDC9-206ENST00000601154 RALGAPBQ86X10 1494 aa12.35□□□□□ -0.43
CCDC9-206ENST00000601154 UNC5CLQ8IV45 518 aa12.35□□□□□ -0.43
CCDC9-206ENST00000601154 PRAM1Q96QH2 718 aa12.35□□□□□ -0.43
CCDC9-206ENST00000601154 C14orf93Q9H972 538 aaKnown RBP12.35□□□□□ -0.43
CCDC9-206ENST00000601154 PHF8Q9UPP1 1060 aa12.35□□□□□ -0.43
CCDC9-206ENST00000601154 TNS3Q68CZ2 1445 aa12.35□□□□□ -0.43
CCDC9-206ENST00000601154 KIF1AQ12756 1690 aa12.35□□□□□ -0.43
CCDC9-206ENST00000601154 DHX57Q6P158 1386 aaKnown RBP12.34□□□□□ -0.43
CCDC9-206ENST00000601154 SLIT2O94813 1529 aa12.34□□□□□ -0.43
CCDC9-206ENST00000601154 ZRANB1Q9UGI0 708 aa12.34□□□□□ -0.43
CCDC9-206ENST00000601154 GLI3P10071 1580 aa12.34□□□□□ -0.43
CCDC9-206ENST00000601154 MARF1Q9Y4F3 1742 aaKnown RBP12.34□□□□□ -0.43
CCDC9-206ENST00000601154 USP32Q8NFA0 1604 aa12.33□□□□□ -0.43
CCDC9-206ENST00000601154 CCDC9Q9Y3X0 531 aaKnown RBP12.33□□□□□ -0.44
CCDC9-206ENST00000601154 PSME1Q06323 249 aa12.32□□□□□ -0.44
CCDC9-206ENST00000601154 PMFBP1Q8TBY8 1022 aa12.32□□□□□ -0.44
CCDC9-206ENST00000601154 POGKQ9P215 609 aa12.32□□□□□ -0.44
CCDC9-206ENST00000601154 NRXN1Q9ULB1 1477 aa12.32□□□□□ -0.44
CCDC9-206ENST00000601154 SIRT1Q96EB6 747 aa12.31□□□□□ -0.44
CCDC9-206ENST00000601154 HIRIP3Q9BW71 556 aaPredicted RBP12.31□□□□□ -0.44
CCDC9-206ENST00000601154 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.31□□□□□ -0.44
CCDC9-206ENST00000601154 A0A0G2JS52 829 aa12.3□□□□□ -0.44
CCDC9-206ENST00000601154 MYT1Q01538 1121 aa12.3□□□□□ -0.44
CCDC9-206ENST00000601154 CCDC125Q86Z20 511 aa12.3□□□□□ -0.44
CCDC9-206ENST00000601154 SEPT12Q8IYM1 358 aa12.3□□□□□ -0.44
CCDC9-206ENST00000601154 TRAK1Q9UPV9 953 aa12.3□□□□□ -0.44
CCDC9-206ENST00000601154 RAB3GAP2Q9H2M9 1393 aa12.3□□□□□ -0.44
CCDC9-206ENST00000601154 VPS72Q15906 364 aa12.29□□□□□ -0.44
CCDC9-206ENST00000601154 DEFB132Q7Z7B7 95 aa12.29□□□□□ -0.44
CCDC9-206ENST00000601154 MINK1Q8N4C8 1332 aaPredicted RBP12.29□□□□□ -0.44
CCDC9-206ENST00000601154 SBNO1A3KN83 1393 aa12.29□□□□□ -0.44
CCDC9-206ENST00000601154 ARHGEF10O15013 1369 aa12.29□□□□□ -0.44
CCDC9-206ENST00000601154 BLMP54132 1417 aaPredicted RBP12.28□□□□□ -0.44
CCDC9-206ENST00000601154 EP400Q96L91 3159 aa12.28□□□□□ -0.44
CCDC9-206ENST00000601154 KDM2AQ9Y2K7 1162 aa12.28□□□□□ -0.44
CCDC9-206ENST00000601154 SRCAPQ6ZRS2 3230 aa12.28□□□□□ -0.44
CCDC9-206ENST00000601154 RGPD8O14715 1765 aaPredicted RBP12.28□□□□□ -0.44
CCDC9-206ENST00000601154 ANKARQ7Z5J8 1434 aa12.28□□□□□ -0.44
CCDC9-206ENST00000601154 DLC1Q96QB1 1528 aa12.27□□□□□ -0.44
CCDC9-206ENST00000601154 PLCH1Q4KWH8 1693 aa12.27□□□□□ -0.45
CCDC9-206ENST00000601154 SF3B2Q13435 895 aaKnown RBP12.27□□□□□ -0.45
CCDC9-206ENST00000601154 FAM83GA6ND36 823 aa12.26□□□□□ -0.45
CCDC9-206ENST00000601154 PRR36Q9H6K5 1346 aa12.26□□□□□ -0.45
CCDC9-206ENST00000601154 ADGRB1O14514 1584 aa12.26□□□□□ -0.45
CCDC9-206ENST00000601154 ABCA3Q99758 1704 aa12.25□□□□□ -0.45
CCDC9-206ENST00000601154 KRT27Q7Z3Y8 459 aa12.25□□□□□ -0.45
CCDC9-206ENST00000601154 DCAF11Q8TEB1 546 aa12.25□□□□□ -0.45
CCDC9-206ENST00000601154 BTG4Q9NY30 223 aa12.25□□□□□ -0.45
CCDC9-206ENST00000601154 ACIN1Q9UKV3 1341 aaKnown RBP12.25□□□□□ -0.45
CCDC9-206ENST00000601154 GPRASP1Q5JY77 1395 aa12.25□□□□□ -0.45
CCDC9-206ENST00000601154 ADGRB2O60241 1585 aa12.25□□□□□ -0.45
CCDC9-206ENST00000601154 PAK3O75914 559 aaPredicted RBP12.24□□□□□ -0.45
CCDC9-206ENST00000601154 FAM98CQ17RN3 349 aaKnown RBP12.24□□□□□ -0.45
CCDC9-206ENST00000601154 BRWD3Q6RI45 1802 aa12.23□□□□□ -0.45
CCDC9-206ENST00000601154 TULP4Q9NRJ4 1543 aa12.23□□□□□ -0.45
CCDC9-206ENST00000601154 NGDNQ8NEJ9 315 aaKnown RBP12.23□□□□□ -0.45
CCDC9-206ENST00000601154 NWD2Q9ULI1 1742 aa12.23□□□□□ -0.45
CCDC9-206ENST00000601154 EIF3AQ14152 1382 aaKnown RBP12.22□□□□□ -0.45
CCDC9-206ENST00000601154 WASLO00401 505 aaPredicted RBP12.22□□□□□ -0.45
CCDC9-206ENST00000601154 TRPM3Q9HCF6 1732 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms