RNA–Protein interactions for RNA: ENST00000600940.1

USP29-204, Transcript of ubiquitin specific peptidase 29, humanhuman

TSL 4

Gene USP29, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-204ENST00000600940 ESCO1Q5FWF5 840 aa20.6■□□□□ 0.89
USP29-204ENST00000600940 QTRT2Q9H974 415 aaKnown RBP20.59■□□□□ 0.89
USP29-204ENST00000600940 ANKRD30BQ9BXX2 1392 aa20.58■□□□□ 0.88
USP29-204ENST00000600940 NUTM2FA1L443 756 aa20.56■□□□□ 0.88
USP29-204ENST00000600940 SOS2Q07890 1332 aaPredicted RBP20.55■□□□□ 0.88
USP29-204ENST00000600940 TMEM132EQ6IEE7 984 aa20.55■□□□□ 0.88
USP29-204ENST00000600940 WAPLQ7Z5K2 1190 aa20.55■□□□□ 0.88
USP29-204ENST00000600940 UPF1Q92900 1129 aaKnown RBP eCLIP20.55■□□□□ 0.88
USP29-204ENST00000600940 RBM6P78332 1123 aaKnown RBP20.54■□□□□ 0.88
USP29-204ENST00000600940 NPHP3Q7Z494 1330 aa20.53■□□□□ 0.88
USP29-204ENST00000600940 ACIN1Q9UKV3 1341 aaKnown RBP20.53■□□□□ 0.88
USP29-204ENST00000600940 PRAG1Q86YV5 1406 aa20.53■□□□□ 0.88
USP29-204ENST00000600940 FOXO3O43524 673 aa20.52■□□□□ 0.88
USP29-204ENST00000600940 XPCQ01831 940 aaPredicted RBP20.52■□□□□ 0.88
USP29-204ENST00000600940 USP21Q9UK80 565 aa20.52■□□□□ 0.88
USP29-204ENST00000600940 SPATA31E1Q6ZUB1 1445 aa20.52■□□□□ 0.87
USP29-204ENST00000600940 CDK12Q9NYV4 1490 aaPredicted RBP20.51■□□□□ 0.87
USP29-204ENST00000600940 POTEDQ86YR6 584 aa20.51■□□□□ 0.87
USP29-204ENST00000600940 LRPPRCP42704 1394 aaKnown RBP20.5■□□□□ 0.87
USP29-204ENST00000600940 CDC42BPGQ6DT37 1551 aa20.5■□□□□ 0.87
USP29-204ENST00000600940 LAMC1P11047 1609 aa20.49■□□□□ 0.87
USP29-204ENST00000600940 IFT172Q9UG01 1749 aa20.49■□□□□ 0.87
USP29-204ENST00000600940 ABCC11Q96J66 1382 aa20.47■□□□□ 0.87
USP29-204ENST00000600940 TRPC5Q9UL62 973 aaPredicted RBP20.47■□□□□ 0.87
USP29-204ENST00000600940 PIK3C2GO75747 1445 aa20.46■□□□□ 0.87
USP29-204ENST00000600940 PLEKHH1Q9ULM0 1364 aa20.46■□□□□ 0.87
USP29-204ENST00000600940 TECPR2O15040 1411 aa20.45■□□□□ 0.86
USP29-204ENST00000600940 YTHDC2Q9H6S0 1430 aaKnown RBP20.45■□□□□ 0.86
USP29-204ENST00000600940 RGS12O14924 1447 aa20.44■□□□□ 0.86
USP29-204ENST00000600940 DHX57Q6P158 1386 aaKnown RBP20.44■□□□□ 0.86
USP29-204ENST00000600940 SAFB2Q14151 953 aaKnown RBP eCLIP20.43■□□□□ 0.86
USP29-204ENST00000600940 CFAP70Q5T0N1 1121 aa20.43■□□□□ 0.86
USP29-204ENST00000600940 KNDC1Q76NI1 1749 aa20.43■□□□□ 0.86
USP29-204ENST00000600940 HAP1P54257 671 aaPredicted RBP20.42■□□□□ 0.86
USP29-204ENST00000600940 C14orf93Q9H972 538 aaKnown RBP20.42■□□□□ 0.86
USP29-204ENST00000600940 PXDNQ92626 1479 aa20.42■□□□□ 0.86
USP29-204ENST00000600940 COL22A1Q8NFW1 1626 aaPredicted RBP20.42■□□□□ 0.86
USP29-204ENST00000600940 PLEKHG5O94827 1062 aa20.41■□□□□ 0.86
USP29-204ENST00000600940 FNBP4Q8N3X1 1017 aaPredicted RBP20.41■□□□□ 0.86
USP29-204ENST00000600940 CNKSR2Q8WXI2 1034 aa20.41■□□□□ 0.86
USP29-204ENST00000600940 POGKQ9P215 609 aa20.41■□□□□ 0.86
USP29-204ENST00000600940 KRT28Q7Z3Y7 464 aa20.4■□□□□ 0.86
USP29-204ENST00000600940 RAB3GAP2Q9H2M9 1393 aa20.4■□□□□ 0.86
USP29-204ENST00000600940 SIRT1Q96EB6 747 aa20.39■□□□□ 0.85
USP29-204ENST00000600940 PRAM1Q96QH2 718 aa20.39■□□□□ 0.85
USP29-204ENST00000600940 FMN2Q9NZ56 1722 aa20.39■□□□□ 0.85
USP29-204ENST00000600940 PSME1Q06323 249 aa20.38■□□□□ 0.85
USP29-204ENST00000600940 NCBP3Q53F19 620 aaKnown RBP20.38■□□□□ 0.85
USP29-204ENST00000600940 LMOD2Q6P5Q4 547 aa20.38■□□□□ 0.85
USP29-204ENST00000600940 MYOM2P54296 1465 aa20.37■□□□□ 0.85
USP29-204ENST00000600940 ATAD2Q6PL18 1390 aa20.37■□□□□ 0.85
USP29-204ENST00000600940 PHF8Q9UPP1 1060 aa20.37■□□□□ 0.85
USP29-204ENST00000600940 KDM2AQ9Y2K7 1162 aa20.37■□□□□ 0.85
USP29-204ENST00000600940 KIF1AQ12756 1690 aa20.36■□□□□ 0.85
USP29-204ENST00000600940 SPATA31A3Q5VYP0 1347 aa20.35■□□□□ 0.85
USP29-204ENST00000600940 MARF1Q9Y4F3 1742 aaKnown RBP20.35■□□□□ 0.85
USP29-204ENST00000600940 RGPD8O14715 1765 aaPredicted RBP20.34■□□□□ 0.85
USP29-204ENST00000600940 ATRNO75882 1429 aa20.34■□□□□ 0.85
USP29-204ENST00000600940 DCAF11Q8TEB1 546 aa20.33■□□□□ 0.85
USP29-204ENST00000600940 TRAK1Q9UPV9 953 aa20.33■□□□□ 0.85
USP29-204ENST00000600940 NRXN1Q9ULB1 1477 aa20.32■□□□□ 0.84
USP29-204ENST00000600940 GJD4Q96KN9 370 aaPredicted RBP20.32■□□□□ 0.84
USP29-204ENST00000600940 PMFBP1Q8TBY8 1022 aa20.31■□□□□ 0.84
USP29-204ENST00000600940 BCL9LQ86UU0 1499 aa20.3■□□□□ 0.84
USP29-204ENST00000600940 UNC5CLQ8IV45 518 aa20.3■□□□□ 0.84
USP29-204ENST00000600940 CABLES1Q8TDN4 633 aa20.3■□□□□ 0.84
USP29-204ENST00000600940 HIRIP3Q9BW71 556 aaPredicted RBP20.3■□□□□ 0.84
USP29-204ENST00000600940 CCDC9Q9Y3X0 531 aaKnown RBP20.29■□□□□ 0.84
USP29-204ENST00000600940 MINK1Q8N4C8 1332 aaPredicted RBP20.28■□□□□ 0.84
USP29-204ENST00000600940 TNS3Q68CZ2 1445 aa20.28■□□□□ 0.84
USP29-204ENST00000600940 ARHGEF10O15013 1369 aa20.25■□□□□ 0.83
USP29-204ENST00000600940 DLC1Q96QB1 1528 aa20.25■□□□□ 0.83
USP29-204ENST00000600940 USP32Q8NFA0 1604 aa20.24■□□□□ 0.83
USP29-204ENST00000600940 SBNO1A3KN83 1393 aa20.24■□□□□ 0.83
USP29-204ENST00000600940 EIF3AQ14152 1382 aaKnown RBP20.23■□□□□ 0.83
USP29-204ENST00000600940 GPRASP1Q5JY77 1395 aa20.23■□□□□ 0.83
USP29-204ENST00000600940 ANKARQ7Z5J8 1434 aa20.23■□□□□ 0.83
USP29-204ENST00000600940 STAC3Q96MF2 364 aa20.23■□□□□ 0.83
USP29-204ENST00000600940 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.22■□□□□ 0.83
USP29-204ENST00000600940 A0A0G2JS52 829 aa20.22■□□□□ 0.83
USP29-204ENST00000600940 MYT1Q01538 1121 aa20.22■□□□□ 0.83
USP29-204ENST00000600940 CCDC125Q86Z20 511 aa20.22■□□□□ 0.83
USP29-204ENST00000600940 NGDNQ8NEJ9 315 aaKnown RBP20.22■□□□□ 0.83
USP29-204ENST00000600940 RALGAPBQ86X10 1494 aa20.22■□□□□ 0.83
USP29-204ENST00000600940 SLIT2O94813 1529 aa20.22■□□□□ 0.83
USP29-204ENST00000600940 EP400Q96L91 3159 aa20.21■□□□□ 0.83
USP29-204ENST00000600940 PAK3O75914 559 aaPredicted RBP20.21■□□□□ 0.83
USP29-204ENST00000600940 ZRANB1Q9UGI0 708 aa20.21■□□□□ 0.83
USP29-204ENST00000600940 ADGRB1O14514 1584 aa20.2■□□□□ 0.82
USP29-204ENST00000600940 WASLO00401 505 aaPredicted RBP20.19■□□□□ 0.82
USP29-204ENST00000600940 ADGRB2O60241 1585 aa20.18■□□□□ 0.82
USP29-204ENST00000600940 HRCP23327 699 aa20.18■□□□□ 0.82
USP29-204ENST00000600940 SF3B2Q13435 895 aaKnown RBP20.18■□□□□ 0.82
USP29-204ENST00000600940 VPS72Q15906 364 aa20.18■□□□□ 0.82
USP29-204ENST00000600940 SEPT12Q8IYM1 358 aa20.18■□□□□ 0.82
USP29-204ENST00000600940 FAM83GA6ND36 823 aa20.17■□□□□ 0.82
USP29-204ENST00000600940 GLI3P10071 1580 aa20.17■□□□□ 0.82
USP29-204ENST00000600940 PLCH1Q4KWH8 1693 aa20.16■□□□□ 0.82
USP29-204ENST00000600940 PRR36Q9H6K5 1346 aa20.15■□□□□ 0.82
USP29-204ENST00000600940 TULP4Q9NRJ4 1543 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms