RNA–Protein interactions for RNA: ENST00000600610.5

GTPBP3-221, Transcript of GTP binding protein 3, mitochondrial, human

TSL 1 (best)

Gene GTPBP3, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-221	ENST00000600610	ROBO2	Q9HCK4	1378 aa		29.47	■■■□□ 2.31
GTPBP3-221	ENST00000600610	HSPA1L	P34931	641 aa		29.46	■■■□□ 2.31
GTPBP3-221	ENST00000600610	ARHGEF28	Q8N1W1	1705 aa	Known RBP	29.45	■■■□□ 2.31
GTPBP3-221	ENST00000600610	ADGRL3	Q9HAR2	1447 aa		29.45	■■■□□ 2.3
GTPBP3-221	ENST00000600610	ROBO1	Q9Y6N7	1651 aa		29.42	■■■□□ 2.3
GTPBP3-221	ENST00000600610	NALCN	Q8IZF0	1738 aa		29.41	■■■□□ 2.3
GTPBP3-221	ENST00000600610	TRAK1	Q9UPV9	953 aa		29.41	■■■□□ 2.3
GTPBP3-221	ENST00000600610	EIF3A	Q14152	1382 aa	Known RBP	29.39	■■■□□ 2.29
GTPBP3-221	ENST00000600610	CARD11	Q9BXL7	1154 aa		29.38	■■■□□ 2.29
GTPBP3-221	ENST00000600610	POGK	Q9P215	609 aa		29.38	■■■□□ 2.29
GTPBP3-221	ENST00000600610	PRAM1	Q96QH2	718 aa		29.36	■■■□□ 2.29
GTPBP3-221	ENST00000600610	WAPL	Q7Z5K2	1190 aa		29.34	■■■□□ 2.29
GTPBP3-221	ENST00000600610	ADGRB2	O60241	1585 aa		29.32	■■■□□ 2.28
GTPBP3-221	ENST00000600610	CDC42BPG	Q6DT37	1551 aa		29.32	■■■□□ 2.28
GTPBP3-221	ENST00000600610	MST1R	Q04912	1400 aa		29.32	■■■□□ 2.28
GTPBP3-221	ENST00000600610	SLC24A1	O60721	1099 aa		29.31	■■■□□ 2.28
GTPBP3-221	ENST00000600610	PLEKHH1	Q9ULM0	1364 aa		29.3	■■■□□ 2.28
GTPBP3-221	ENST00000600610	CENPJ	Q9HC77	1338 aa	Predicted RBP	29.29	■■■□□ 2.28
GTPBP3-221	ENST00000600610	QRICH2	Q9H0J4	1663 aa		29.27	■■■□□ 2.28
GTPBP3-221	ENST00000600610	BRINP3	Q76B58	766 aa		29.26	■■■□□ 2.27
GTPBP3-221	ENST00000600610	SBNO2	Q9Y2G9	1366 aa		29.26	■■■□□ 2.27
GTPBP3-221	ENST00000600610	PHLPP1	O60346	1717 aa		29.25	■■■□□ 2.27
GTPBP3-221	ENST00000600610	ZEB1	P37275	1124 aa	Predicted RBP	29.24	■■■□□ 2.27
GTPBP3-221	ENST00000600610	C1orf167	Q5SNV9	1468 aa		29.23	■■■□□ 2.27
GTPBP3-221	ENST00000600610	FMN2	Q9NZ56	1722 aa		29.23	■■■□□ 2.27
GTPBP3-221	ENST00000600610	AHDC1	Q5TGY3	1603 aa	Predicted RBP	29.23	■■■□□ 2.27
GTPBP3-221	ENST00000600610	SAFB2	Q14151	953 aa	Known RBP eCLIP	29.19	■■■□□ 2.26
GTPBP3-221	ENST00000600610	USP47	Q96K76	1375 aa		29.17	■■■□□ 2.26
GTPBP3-221	ENST00000600610	WASL	O00401	505 aa	Predicted RBP	29.17	■■■□□ 2.26
GTPBP3-221	ENST00000600610	MINK1	Q8N4C8	1332 aa	Predicted RBP	29.17	■■■□□ 2.26
GTPBP3-221	ENST00000600610	COL16A1	Q07092	1604 aa	Predicted RBP	29.16	■■■□□ 2.26
GTPBP3-221	ENST00000600610	NHSL1	Q5SYE7	1610 aa		29.16	■■■□□ 2.26
GTPBP3-221	ENST00000600610	ANKAR	Q7Z5J8	1434 aa		29.16	■■■□□ 2.26
GTPBP3-221	ENST00000600610	EVC2	Q86UK5	1308 aa		29.13	■■■□□ 2.25
GTPBP3-221	ENST00000600610	TULP4	Q9NRJ4	1543 aa		29.12	■■■□□ 2.25
GTPBP3-221	ENST00000600610	ORAI2	Q96SN7	254 aa		29.12	■■■□□ 2.25
GTPBP3-221	ENST00000600610	JCAD	Q9P266	1359 aa		29.12	■■■□□ 2.25
GTPBP3-221	ENST00000600610	ITSN1	Q15811	1721 aa		29.11	■■■□□ 2.25
GTPBP3-221	ENST00000600610	ST20-MTHFS	A0A0A6YYL1	179 aa		29.11	■■■□□ 2.25
GTPBP3-221	ENST00000600610	EIF4G2	P78344	907 aa	Known RBP eCLIP	29.11	■■■□□ 2.25
GTPBP3-221	ENST00000600610	PUS7	Q96PZ0	661 aa	Known RBP	29.11	■■■□□ 2.25
GTPBP3-221	ENST00000600610	RGPD8	O14715	1765 aa	Predicted RBP	29.11	■■■□□ 2.25
GTPBP3-221	ENST00000600610	HIRIP3	Q9BW71	556 aa	Predicted RBP	29.1	■■■□□ 2.25
GTPBP3-221	ENST00000600610	ESCO1	Q5FWF5	840 aa		29.09	■■■□□ 2.25
GTPBP3-221	ENST00000600610	CDK19	Q9BWU1	502 aa		29.08	■■■□□ 2.25
GTPBP3-221	ENST00000600610	DISP3	Q9P2K9	1392 aa		29.08	■■■□□ 2.25
GTPBP3-221	ENST00000600610	MED1	Q15648	1581 aa	Predicted RBP	29.08	■■■□□ 2.25
GTPBP3-221	ENST00000600610	KIF1A	Q12756	1690 aa		29.07	■■■□□ 2.24
GTPBP3-221	ENST00000600610	LRRC59	Q96AG4	307 aa	Known RBP	29.06	■■■□□ 2.24
GTPBP3-221	ENST00000600610	TESK2	Q96S53	571 aa		29.06	■■■□□ 2.24
GTPBP3-221	ENST00000600610	USP32	Q8NFA0	1604 aa		29.05	■■■□□ 2.24
GTPBP3-221	ENST00000600610	NUTM2F	A1L443	756 aa		29.04	■■■□□ 2.24
GTPBP3-221	ENST00000600610	SHPRH	Q149N8	1683 aa		29.03	■■■□□ 2.24
GTPBP3-221	ENST00000600610	SOS2	Q07890	1332 aa	Predicted RBP	29.02	■■■□□ 2.24
GTPBP3-221	ENST00000600610	NPHP3	Q7Z494	1330 aa		29.02	■■■□□ 2.24
GTPBP3-221	ENST00000600610	CDCA8	Q53HL2	280 aa		29.02	■■■□□ 2.24
GTPBP3-221	ENST00000600610	SPATA31A6	Q5VVP1	1343 aa		29.01	■■■□□ 2.23
GTPBP3-221	ENST00000600610	SRPK2	P78362	688 aa	Known RBP	29.01	■■■□□ 2.23
GTPBP3-221	ENST00000600610	DDX17	Q92841	729 aa	Known RBP	29.01	■■■□□ 2.23
GTPBP3-221	ENST00000600610	NUDT16	Q96DE0	195 aa	Known RBP	29.01	■■■□□ 2.23
GTPBP3-221	ENST00000600610	CCDC61	Q9Y6R9	512 aa		29.01	■■■□□ 2.23
GTPBP3-221	ENST00000600610	ATP7B	P35670	1465 aa		29.01	■■■□□ 2.23
GTPBP3-221	ENST00000600610	TOPAZ1	Q8N9V7	1692 aa		29	■■■□□ 2.23
GTPBP3-221	ENST00000600610	TMF1	P82094	1093 aa		29	■■■□□ 2.23
GTPBP3-221	ENST00000600610	ATAD2	Q6PL18	1390 aa		28.99	■■■□□ 2.23
GTPBP3-221	ENST00000600610	HSPA5	P11021	654 aa	Known RBP	28.97	■■■□□ 2.23
GTPBP3-221	ENST00000600610	PRR36	Q9H6K5	1346 aa		28.96	■■■□□ 2.23
GTPBP3-221	ENST00000600610	FOXO3	O43524	673 aa		28.96	■■■□□ 2.23
GTPBP3-221	ENST00000600610	PHF8	Q9UPP1	1060 aa		28.96	■■■□□ 2.23
GTPBP3-221	ENST00000600610	PLEKHG3	A1L390	1219 aa		28.94	■■■□□ 2.22
GTPBP3-221	ENST00000600610	CABP2	Q9NPB3	220 aa		28.94	■■■□□ 2.22
GTPBP3-221	ENST00000600610	PXDN	Q92626	1479 aa		28.92	■■■□□ 2.22
GTPBP3-221	ENST00000600610	NINL	Q9Y2I6	1382 aa		28.91	■■■□□ 2.22
GTPBP3-221	ENST00000600610	PHF23	Q9BUL5	403 aa	Predicted RBP	28.91	■■■□□ 2.22
GTPBP3-221	ENST00000600610	PNPLA6	Q8IY17	1366 aa		28.9	■■■□□ 2.22
GTPBP3-221	ENST00000600610	PPIP5K1	Q6PFW1	1433 aa		28.88	■■■□□ 2.21
GTPBP3-221	ENST00000600610	POLR3A	O14802	1390 aa	Predicted RBP	28.88	■■■□□ 2.21
GTPBP3-221	ENST00000600610	PSME1	Q06323	249 aa		28.87	■■■□□ 2.21
GTPBP3-221	ENST00000600610	BRD4	O60885	1362 aa	Predicted RBP	28.87	■■■□□ 2.21
GTPBP3-221	ENST00000600610	KRT28	Q7Z3Y7	464 aa		28.86	■■■□□ 2.21
GTPBP3-221	ENST00000600610	NGDN	Q8NEJ9	315 aa	Known RBP	28.84	■■■□□ 2.21
GTPBP3-221	ENST00000600610	PMFBP1	Q8TBY8	1022 aa		28.84	■■■□□ 2.21
GTPBP3-221	ENST00000600610	ZNF692	Q9BU19	519 aa	Predicted RBP	28.84	■■■□□ 2.21
GTPBP3-221	ENST00000600610	COL22A1	Q8NFW1	1626 aa	Predicted RBP	28.83	■■■□□ 2.21
GTPBP3-221	ENST00000600610	XPC	Q01831	940 aa	Predicted RBP	28.83	■■■□□ 2.21
GTPBP3-221	ENST00000600610	LRP6	O75581	1613 aa		28.83	■■■□□ 2.21
GTPBP3-221	ENST00000600610	AKAP12	Q02952	1782 aa		28.83	■■■□□ 2.21
GTPBP3-221	ENST00000600610	CABP1	Q9NZU7	370 aa		28.82	■■■□□ 2.2
GTPBP3-221	ENST00000600610	SPATA31A3	Q5VYP0	1347 aa		28.81	■■■□□ 2.2
GTPBP3-221	ENST00000600610	SBNO1	A3KN83	1393 aa		28.8	■■■□□ 2.2
GTPBP3-221	ENST00000600610	ACE	P12821	1306 aa		28.8	■■■□□ 2.2
GTPBP3-221	ENST00000600610	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.8	■■■□□ 2.2
GTPBP3-221	ENST00000600610	NUTM2E	B1AL46	878 aa	Predicted RBP	28.8	■■■□□ 2.2
GTPBP3-221	ENST00000600610	MEX3C	Q5U5Q3	659 aa	Known RBP	28.8	■■■□□ 2.2
GTPBP3-221	ENST00000600610	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.8	■■■□□ 2.2
GTPBP3-221	ENST00000600610	TERF2IP	Q9NYB0	399 aa		28.77	■■■□□ 2.2
GTPBP3-221	ENST00000600610	RGS17	Q9UGC6	210 aa	Predicted RBP	28.77	■■■□□ 2.2
GTPBP3-221	ENST00000600610	TRPM3	Q9HCF6	1732 aa	Predicted RBP	28.77	■■■□□ 2.2
GTPBP3-221	ENST00000600610	CPSF1	Q10570	1443 aa	Known RBP	28.77	■■■□□ 2.2
GTPBP3-221	ENST00000600610	TNS3	Q68CZ2	1445 aa		28.75	■■■□□ 2.19

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