RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 XPCQ01831 940 aaPredicted RBP20.52■□□□□ 0.88
IRF3-225ENST00000600022 SRCAPQ6ZRS2 3230 aa20.52■□□□□ 0.88
IRF3-225ENST00000600022 TMEM132EQ6IEE7 984 aa20.51■□□□□ 0.87
IRF3-225ENST00000600022 ESCO1Q5FWF5 840 aa20.5■□□□□ 0.87
IRF3-225ENST00000600022 PPLO60437 1756 aa20.49■□□□□ 0.87
IRF3-225ENST00000600022 LAMC1P11047 1609 aa20.49■□□□□ 0.87
IRF3-225ENST00000600022 PRAG1Q86YV5 1406 aa20.48■□□□□ 0.87
IRF3-225ENST00000600022 FOXO3O43524 673 aa20.48■□□□□ 0.87
IRF3-225ENST00000600022 USP21Q9UK80 565 aa20.48■□□□□ 0.87
IRF3-225ENST00000600022 PLEKHH1Q9ULM0 1364 aa20.47■□□□□ 0.87
IRF3-225ENST00000600022 MPHOSPH9Q99550 1183 aa20.47■□□□□ 0.87
IRF3-225ENST00000600022 FNBP4Q8N3X1 1017 aaPredicted RBP20.46■□□□□ 0.87
IRF3-225ENST00000600022 SPATA31E1Q6ZUB1 1445 aa20.44■□□□□ 0.86
IRF3-225ENST00000600022 PXDNQ92626 1479 aa20.42■□□□□ 0.86
IRF3-225ENST00000600022 TRPC5Q9UL62 973 aaPredicted RBP20.41■□□□□ 0.86
IRF3-225ENST00000600022 CCDC144AA2RUR9 1427 aa20.41■□□□□ 0.86
IRF3-225ENST00000600022 EP400Q96L91 3159 aa20.4■□□□□ 0.86
IRF3-225ENST00000600022 LRPPRCP42704 1394 aaKnown RBP20.4■□□□□ 0.86
IRF3-225ENST00000600022 NPHP3Q7Z494 1330 aa20.4■□□□□ 0.86
IRF3-225ENST00000600022 MYOM2P54296 1465 aa20.39■□□□□ 0.85
IRF3-225ENST00000600022 CDC42BPGQ6DT37 1551 aa20.38■□□□□ 0.85
IRF3-225ENST00000600022 BCL9LQ86UU0 1499 aa20.38■□□□□ 0.85
IRF3-225ENST00000600022 ATRNO75882 1429 aa20.38■□□□□ 0.85
IRF3-225ENST00000600022 ABCC11Q96J66 1382 aa20.38■□□□□ 0.85
IRF3-225ENST00000600022 COL22A1Q8NFW1 1626 aaPredicted RBP20.38■□□□□ 0.85
IRF3-225ENST00000600022 TECPR2O15040 1411 aa20.37■□□□□ 0.85
IRF3-225ENST00000600022 ANKRD30BQ9BXX2 1392 aa20.35■□□□□ 0.85
IRF3-225ENST00000600022 CFAP70Q5T0N1 1121 aa20.35■□□□□ 0.85
IRF3-225ENST00000600022 PIK3C2GO75747 1445 aa20.35■□□□□ 0.85
IRF3-225ENST00000600022 IFT172Q9UG01 1749 aa20.34■□□□□ 0.85
IRF3-225ENST00000600022 PLEKHG5O94827 1062 aa20.34■□□□□ 0.85
IRF3-225ENST00000600022 YTHDC2Q9H6S0 1430 aaKnown RBP20.34■□□□□ 0.85
IRF3-225ENST00000600022 TRIM26Q12899 539 aaPredicted RBP20.33■□□□□ 0.85
IRF3-225ENST00000600022 KRT28Q7Z3Y7 464 aa20.33■□□□□ 0.85
IRF3-225ENST00000600022 C14orf93Q9H972 538 aaKnown RBP20.33■□□□□ 0.85
IRF3-225ENST00000600022 SPATA31A3Q5VYP0 1347 aa20.32■□□□□ 0.84
IRF3-225ENST00000600022 SAFB2Q14151 953 aaKnown RBP eCLIP20.32■□□□□ 0.84
IRF3-225ENST00000600022 CABLES1Q8TDN4 633 aa20.32■□□□□ 0.84
IRF3-225ENST00000600022 GJD4Q96KN9 370 aaPredicted RBP20.32■□□□□ 0.84
IRF3-225ENST00000600022 ATAD2Q6PL18 1390 aa20.32■□□□□ 0.84
IRF3-225ENST00000600022 FMN2Q9NZ56 1722 aa20.28■□□□□ 0.84
IRF3-225ENST00000600022 SIRT1Q96EB6 747 aa20.28■□□□□ 0.84
IRF3-225ENST00000600022 UNC5CLQ8IV45 518 aa20.27■□□□□ 0.84
IRF3-225ENST00000600022 PRAM1Q96QH2 718 aa20.27■□□□□ 0.84
IRF3-225ENST00000600022 PHF8Q9UPP1 1060 aa20.27■□□□□ 0.84
IRF3-225ENST00000600022 RGPD8O14715 1765 aaPredicted RBP20.26■□□□□ 0.83
IRF3-225ENST00000600022 KNDC1Q76NI1 1749 aa20.26■□□□□ 0.83
IRF3-225ENST00000600022 MARF1Q9Y4F3 1742 aaKnown RBP20.26■□□□□ 0.83
IRF3-225ENST00000600022 SLIT2O94813 1529 aa20.24■□□□□ 0.83
IRF3-225ENST00000600022 PMFBP1Q8TBY8 1022 aa20.24■□□□□ 0.83
IRF3-225ENST00000600022 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
IRF3-225ENST00000600022 NRXN1Q9ULB1 1477 aa20.24■□□□□ 0.83
IRF3-225ENST00000600022 GLI3P10071 1580 aa20.23■□□□□ 0.83
IRF3-225ENST00000600022 DHX57Q6P158 1386 aaKnown RBP20.22■□□□□ 0.83
IRF3-225ENST00000600022 LMOD2Q6P5Q4 547 aa20.22■□□□□ 0.83
IRF3-225ENST00000600022 PCGF6Q9BYE7 350 aa20.22■□□□□ 0.83
IRF3-225ENST00000600022 HIRIP3Q9BW71 556 aaPredicted RBP20.21■□□□□ 0.83
IRF3-225ENST00000600022 PSME1Q06323 249 aa20.2■□□□□ 0.82
IRF3-225ENST00000600022 FAM83GA6ND36 823 aa20.19■□□□□ 0.82
IRF3-225ENST00000600022 POGKQ9P215 609 aa20.19■□□□□ 0.82
IRF3-225ENST00000600022 TRAK1Q9UPV9 953 aa20.19■□□□□ 0.82
IRF3-225ENST00000600022 KDM2AQ9Y2K7 1162 aa20.19■□□□□ 0.82
IRF3-225ENST00000600022 TNS3Q68CZ2 1445 aa20.19■□□□□ 0.82
IRF3-225ENST00000600022 HAP1P54257 671 aaPredicted RBP20.18■□□□□ 0.82
IRF3-225ENST00000600022 DEFB132Q7Z7B7 95 aa20.18■□□□□ 0.82
IRF3-225ENST00000600022 SEPT12Q8IYM1 358 aa20.18■□□□□ 0.82
IRF3-225ENST00000600022 ZRANB1Q9UGI0 708 aa20.18■□□□□ 0.82
IRF3-225ENST00000600022 KIF1AQ12756 1690 aa20.18■□□□□ 0.82
IRF3-225ENST00000600022 RAB3GAP2Q9H2M9 1393 aa20.18■□□□□ 0.82
IRF3-225ENST00000600022 USP32Q8NFA0 1604 aa20.17■□□□□ 0.82
IRF3-225ENST00000600022 VPS72Q15906 364 aa20.16■□□□□ 0.82
IRF3-225ENST00000600022 CCDC125Q86Z20 511 aa20.16■□□□□ 0.82
IRF3-225ENST00000600022 MINK1Q8N4C8 1332 aaPredicted RBP20.16■□□□□ 0.82
IRF3-225ENST00000600022 PRR36Q9H6K5 1346 aa20.16■□□□□ 0.82
IRF3-225ENST00000600022 CCDC9Q9Y3X0 531 aaKnown RBP20.15■□□□□ 0.82
IRF3-225ENST00000600022 SBNO1A3KN83 1393 aa20.15■□□□□ 0.82
IRF3-225ENST00000600022 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.15■□□□□ 0.82
IRF3-225ENST00000600022 BRWD3Q6RI45 1802 aa20.14■□□□□ 0.81
IRF3-225ENST00000600022 ADGRB1O14514 1584 aa20.13■□□□□ 0.81
IRF3-225ENST00000600022 ONECUT3O60422 494 aaPredicted RBP20.13■□□□□ 0.81
IRF3-225ENST00000600022 DCAF11Q8TEB1 546 aa20.13■□□□□ 0.81
IRF3-225ENST00000600022 DLC1Q96QB1 1528 aa20.1■□□□□ 0.81
IRF3-225ENST00000600022 BLMP54132 1417 aaPredicted RBP20.1■□□□□ 0.81
IRF3-225ENST00000600022 BTG4Q9NY30 223 aa20.09■□□□□ 0.81
IRF3-225ENST00000600022 PLCH1Q4KWH8 1693 aa20.09■□□□□ 0.81
IRF3-225ENST00000600022 ARHGEF10O15013 1369 aa20.08■□□□□ 0.81
IRF3-225ENST00000600022 ABCA3Q99758 1704 aa20.08■□□□□ 0.81
IRF3-225ENST00000600022 WASLO00401 505 aaPredicted RBP20.08■□□□□ 0.81
IRF3-225ENST00000600022 FAM98CQ17RN3 349 aaKnown RBP20.08■□□□□ 0.81
IRF3-225ENST00000600022 FAM182BQ5T319 152 aa20.08■□□□□ 0.81
IRF3-225ENST00000600022 KRT27Q7Z3Y8 459 aa20.08■□□□□ 0.81
IRF3-225ENST00000600022 ANKARQ7Z5J8 1434 aa20.08■□□□□ 0.8
IRF3-225ENST00000600022 ACIN1Q9UKV3 1341 aaKnown RBP20.07■□□□□ 0.8
IRF3-225ENST00000600022 TRPM3Q9HCF6 1732 aaPredicted RBP20.05■□□□□ 0.8
IRF3-225ENST00000600022 ADGRB2O60241 1585 aa20.04■□□□□ 0.8
IRF3-225ENST00000600022 A0A0G2JS52 829 aa20.04■□□□□ 0.8
IRF3-225ENST00000600022 PAK3O75914 559 aaPredicted RBP20.04■□□□□ 0.8
IRF3-225ENST00000600022 MYT1Q01538 1121 aa20.04■□□□□ 0.8
IRF3-225ENST00000600022 NGDNQ8NEJ9 315 aaKnown RBP20.04■□□□□ 0.8
IRF3-225ENST00000600022 NWD2Q9ULI1 1742 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms