RNA–Protein interactions for RNA: ENST00000599839.5

CALM3-212, Transcript of calmodulin 3, humanhuman

TSL 1 (best) BASIC

Gene CALM3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-212ENST00000599839 C19orf44Q9H6X5 657 aa22.57■■□□□ 1.2
CALM3-212ENST00000599839 FMN2Q9NZ56 1722 aa22.57■■□□□ 1.2
CALM3-212ENST00000599839 ROCK2O75116 1388 aaKnown RBP22.56■■□□□ 1.2
CALM3-212ENST00000599839 PIP4K2BP78356 416 aa22.56■■□□□ 1.2
CALM3-212ENST00000599839 ADGRB2O60241 1585 aa22.56■■□□□ 1.2
CALM3-212ENST00000599839 QRICH2Q9H0J4 1663 aa22.55■■□□□ 1.2
CALM3-212ENST00000599839 SAFB2Q14151 953 aaKnown RBP eCLIP22.55■■□□□ 1.2
CALM3-212ENST00000599839 SIRT1Q96EB6 747 aa22.55■■□□□ 1.2
CALM3-212ENST00000599839 MST1RQ04912 1400 aa22.55■■□□□ 1.2
CALM3-212ENST00000599839 GPRASP1Q5JY77 1395 aa22.54■■□□□ 1.2
CALM3-212ENST00000599839 RGPD8O14715 1765 aaPredicted RBP22.53■■□□□ 1.2
CALM3-212ENST00000599839 SCAF1Q9H7N4 1312 aaKnown RBP22.52■■□□□ 1.2
CALM3-212ENST00000599839 ATF3P18847 181 aa22.5■■□□□ 1.19
CALM3-212ENST00000599839 CADPS2Q86UW7 1296 aa22.5■■□□□ 1.19
CALM3-212ENST00000599839 TIMELESSQ9UNS1 1208 aa22.5■■□□□ 1.19
CALM3-212ENST00000599839 USP32Q8NFA0 1604 aa22.5■■□□□ 1.19
CALM3-212ENST00000599839 POGKQ9P215 609 aa22.5■■□□□ 1.19
CALM3-212ENST00000599839 SLAIN2Q9P270 581 aa22.49■■□□□ 1.19
CALM3-212ENST00000599839 MINK1Q8N4C8 1332 aaPredicted RBP22.47■■□□□ 1.19
CALM3-212ENST00000599839 C1orf167Q5SNV9 1468 aa22.46■■□□□ 1.19
CALM3-212ENST00000599839 HIRIP3Q9BW71 556 aaPredicted RBP22.46■■□□□ 1.19
CALM3-212ENST00000599839 NHSL1Q5SYE7 1610 aa22.45■■□□□ 1.18
CALM3-212ENST00000599839 CARD11Q9BXL7 1154 aa22.44■■□□□ 1.18
CALM3-212ENST00000599839 PHLPP1O60346 1717 aa22.43■■□□□ 1.18
CALM3-212ENST00000599839 NUTM2FA1L443 756 aa22.43■■□□□ 1.18
CALM3-212ENST00000599839 CENPJQ9HC77 1338 aaPredicted RBP22.42■■□□□ 1.18
CALM3-212ENST00000599839 TULP4Q9NRJ4 1543 aa22.42■■□□□ 1.18
CALM3-212ENST00000599839 BRINP3Q76B58 766 aa22.41■■□□□ 1.18
CALM3-212ENST00000599839 AHDC1Q5TGY3 1603 aaPredicted RBP22.41■■□□□ 1.18
CALM3-212ENST00000599839 HSPA1LP34931 641 aa22.4■■□□□ 1.18
CALM3-212ENST00000599839 COL16A1Q07092 1604 aaPredicted RBP22.4■■□□□ 1.18
CALM3-212ENST00000599839 TOPAZ1Q8N9V7 1692 aa22.39■■□□□ 1.17
CALM3-212ENST00000599839 ORAI2Q96SN7 254 aa22.38■■□□□ 1.17
CALM3-212ENST00000599839 EIF3AQ14152 1382 aaKnown RBP22.38■■□□□ 1.17
CALM3-212ENST00000599839 ITSN1Q15811 1721 aa22.37■■□□□ 1.17
CALM3-212ENST00000599839 KIF1AQ12756 1690 aa22.37■■□□□ 1.17
CALM3-212ENST00000599839 ATP7BP35670 1465 aa22.36■■□□□ 1.17
CALM3-212ENST00000599839 PRR36Q9H6K5 1346 aa22.36■■□□□ 1.17
CALM3-212ENST00000599839 WASLO00401 505 aaPredicted RBP22.36■■□□□ 1.17
CALM3-212ENST00000599839 ANKARQ7Z5J8 1434 aa22.35■■□□□ 1.17
CALM3-212ENST00000599839 DDX17Q92841 729 aaKnown RBP22.35■■□□□ 1.17
CALM3-212ENST00000599839 USP47Q96K76 1375 aa22.34■■□□□ 1.17
CALM3-212ENST00000599839 ESCO1Q5FWF5 840 aa22.32■■□□□ 1.16
CALM3-212ENST00000599839 CDK19Q9BWU1 502 aa22.31■■□□□ 1.16
CALM3-212ENST00000599839 SBNO2Q9Y2G9 1366 aa22.3■■□□□ 1.16
CALM3-212ENST00000599839 PXDNQ92626 1479 aa22.27■■□□□ 1.16
CALM3-212ENST00000599839 ST20-MTHFSA0A0A6YYL1 179 aa22.27■■□□□ 1.16
CALM3-212ENST00000599839 TESK2Q96S53 571 aa22.26■■□□□ 1.15
CALM3-212ENST00000599839 CABP2Q9NPB3 220 aa22.26■■□□□ 1.15
CALM3-212ENST00000599839 SHPRHQ149N8 1683 aa22.26■■□□□ 1.15
CALM3-212ENST00000599839 NUDT16Q96DE0 195 aaKnown RBP22.25■■□□□ 1.15
CALM3-212ENST00000599839 PHF8Q9UPP1 1060 aa22.25■■□□□ 1.15
CALM3-212ENST00000599839 TRPM3Q9HCF6 1732 aaPredicted RBP22.24■■□□□ 1.15
CALM3-212ENST00000599839 FOXO3O43524 673 aa22.24■■□□□ 1.15
CALM3-212ENST00000599839 SRPK2P78362 688 aaKnown RBP22.24■■□□□ 1.15
CALM3-212ENST00000599839 PMFBP1Q8TBY8 1022 aa22.24■■□□□ 1.15
CALM3-212ENST00000599839 XPCQ01831 940 aaPredicted RBP22.23■■□□□ 1.15
CALM3-212ENST00000599839 EVC2Q86UK5 1308 aa22.23■■□□□ 1.15
CALM3-212ENST00000599839 SOS2Q07890 1332 aaPredicted RBP22.22■■□□□ 1.15
CALM3-212ENST00000599839 PPIP5K1Q6PFW1 1433 aa22.21■■□□□ 1.15
CALM3-212ENST00000599839 DISP3Q9P2K9 1392 aa22.2■■□□□ 1.14
CALM3-212ENST00000599839 AKAP12Q02952 1782 aa22.2■■□□□ 1.14
CALM3-212ENST00000599839 NPHP3Q7Z494 1330 aa22.2■■□□□ 1.14
CALM3-212ENST00000599839 CCDC61Q9Y6R9 512 aa22.17■■□□□ 1.14
CALM3-212ENST00000599839 ALS2Q96Q42 1657 aa22.17■■□□□ 1.14
CALM3-212ENST00000599839 COL22A1Q8NFW1 1626 aaPredicted RBP22.17■■□□□ 1.14
CALM3-212ENST00000599839 JCADQ9P266 1359 aa22.17■■□□□ 1.14
CALM3-212ENST00000599839 POLR3AO14802 1390 aaPredicted RBP22.16■■□□□ 1.14
CALM3-212ENST00000599839 HSPA5P11021 654 aaKnown RBP22.15■■□□□ 1.14
CALM3-212ENST00000599839 MED1Q15648 1581 aaPredicted RBP22.15■■□□□ 1.14
CALM3-212ENST00000599839 PNPLA6Q8IY17 1366 aa22.15■■□□□ 1.14
CALM3-212ENST00000599839 MYOM1P52179 1685 aa22.15■■□□□ 1.14
CALM3-212ENST00000599839 MON2Q7Z3U7 1717 aa22.14■■□□□ 1.13
CALM3-212ENST00000599839 ABCA3Q99758 1704 aa22.14■■□□□ 1.13
CALM3-212ENST00000599839 KRT28Q7Z3Y7 464 aa22.13■■□□□ 1.13
CALM3-212ENST00000599839 LRP6O75581 1613 aa22.13■■□□□ 1.13
CALM3-212ENST00000599839 ATAD2Q6PL18 1390 aa22.13■■□□□ 1.13
CALM3-212ENST00000599839 NRKQ7Z2Y5 1582 aa22.13■■□□□ 1.13
CALM3-212ENST00000599839 ACEP12821 1306 aa22.13■■□□□ 1.13
CALM3-212ENST00000599839 PLEKHG3A1L390 1219 aa22.12■■□□□ 1.13
CALM3-212ENST00000599839 EIF4G2P78344 907 aaKnown RBP eCLIP22.12■■□□□ 1.13
CALM3-212ENST00000599839 CABP1Q9NZU7 370 aa22.12■■□□□ 1.13
CALM3-212ENST00000599839 TNS3Q68CZ2 1445 aa22.12■■□□□ 1.13
CALM3-212ENST00000599839 NGDNQ8NEJ9 315 aaKnown RBP22.12■■□□□ 1.13
CALM3-212ENST00000599839 LRRC59Q96AG4 307 aaKnown RBP22.12■■□□□ 1.13
CALM3-212ENST00000599839 CD163L1Q9NR16 1453 aa22.11■■□□□ 1.13
CALM3-212ENST00000599839 CRYBG1Q9Y4K1 1723 aa22.11■■□□□ 1.13
CALM3-212ENST00000599839 PSME1Q06323 249 aa22.1■■□□□ 1.13
CALM3-212ENST00000599839 SPATA31A3Q5VYP0 1347 aa22.09■■□□□ 1.13
CALM3-212ENST00000599839 TMF1P82094 1093 aa22.09■■□□□ 1.13
CALM3-212ENST00000599839 SBNO1A3KN83 1393 aa22.08■■□□□ 1.13
CALM3-212ENST00000599839 USP6P35125 1406 aa22.07■■□□□ 1.12
CALM3-212ENST00000599839 CPSF1Q10570 1443 aaKnown RBP22.06■■□□□ 1.12
CALM3-212ENST00000599839 PIK3C2AO00443 1686 aa22.06■■□□□ 1.12
CALM3-212ENST00000599839 MARF1Q9Y4F3 1742 aaKnown RBP22.06■■□□□ 1.12
CALM3-212ENST00000599839 SSH2Q76I76 1423 aa22.04■■□□□ 1.12
CALM3-212ENST00000599839 PUS7Q96PZ0 661 aaKnown RBP22.04■■□□□ 1.12
CALM3-212ENST00000599839 SLC12A5Q9H2X9 1139 aa22.04■■□□□ 1.12
CALM3-212ENST00000599839 PHRF1Q9P1Y6 1649 aaKnown RBP22.04■■□□□ 1.12
CALM3-212ENST00000599839 TMC1Q8TDI8 760 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms