RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	PRR14	Q9BWN1	585 aa		13.05	□□□□□ -0.32
SOX2-OT-231	ENST00000599082	ZBTB3	Q9H5J0	574 aa		13.05	□□□□□ -0.32
SOX2-OT-231	ENST00000599082	MCM6	Q14566	821 aa		13.04	□□□□□ -0.32
SOX2-OT-231	ENST00000599082	MORN1	Q5T089	497 aa		13.04	□□□□□ -0.32
SOX2-OT-231	ENST00000599082	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.03	□□□□□ -0.32
SOX2-OT-231	ENST00000599082	NUTM2E	B1AL46	878 aa	Predicted RBP	13.03	□□□□□ -0.32
SOX2-OT-231	ENST00000599082	PUS10	Q3MIT2	529 aa	Known RBP	13.03	□□□□□ -0.32
SOX2-OT-231	ENST00000599082	TMEM259	Q4ZIN3	620 aa		13.03	□□□□□ -0.32
SOX2-OT-231	ENST00000599082	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.03	□□□□□ -0.32
SOX2-OT-231	ENST00000599082	THSD4	Q6ZMP0	1018 aa		13.03	□□□□□ -0.32
SOX2-OT-231	ENST00000599082	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.03	□□□□□ -0.32
SOX2-OT-231	ENST00000599082	BANK1	Q8NDB2	785 aa		13.02	□□□□□ -0.33
SOX2-OT-231	ENST00000599082	IRX2	Q9BZI1	471 aa	Predicted RBP	13.02	□□□□□ -0.33
SOX2-OT-231	ENST00000599082	WBP1L	Q9NX94	342 aa		13.02	□□□□□ -0.33
SOX2-OT-231	ENST00000599082	MTMR2	Q13614	643 aa		13	□□□□□ -0.33
SOX2-OT-231	ENST00000599082	ZMYND15	Q9H091	742 aa		13	□□□□□ -0.33
SOX2-OT-231	ENST00000599082	SLC27A5	Q9Y2P5	690 aa		13	□□□□□ -0.33
SOX2-OT-231	ENST00000599082		A0A0G2JS52	829 aa		12.98	□□□□□ -0.33
SOX2-OT-231	ENST00000599082	C6orf229	H3BNL8	230 aa		12.98	□□□□□ -0.33
SOX2-OT-231	ENST00000599082	SYMPK	Q92797	1274 aa	Known RBP	12.98	□□□□□ -0.33
SOX2-OT-231	ENST00000599082	SNRK	Q9NRH2	765 aa		12.98	□□□□□ -0.33
SOX2-OT-231	ENST00000599082	SPDYE5	A6NIY4	337 aa		12.97	□□□□□ -0.33
SOX2-OT-231	ENST00000599082	AP1G2	O75843	785 aa		12.96	□□□□□ -0.33
SOX2-OT-231	ENST00000599082	PCDHB3	Q9Y5E6	796 aa		12.96	□□□□□ -0.33
SOX2-OT-231	ENST00000599082	CFAP99	D6REC4	459 aa		12.94	□□□□□ -0.34
SOX2-OT-231	ENST00000599082		Q3C1V9	767 aa		12.94	□□□□□ -0.34
SOX2-OT-231	ENST00000599082	UBTF	P17480	764 aa	Known RBP	12.93	□□□□□ -0.34
SOX2-OT-231	ENST00000599082	BLOC1S3	Q6QNY0	202 aa		12.93	□□□□□ -0.34
SOX2-OT-231	ENST00000599082	SCUBE3	Q8IX30	993 aa		12.92	□□□□□ -0.34
SOX2-OT-231	ENST00000599082	USP17L8	P0C7I0	530 aa		12.91	□□□□□ -0.34
SOX2-OT-231	ENST00000599082	RNF19B	Q6ZMZ0	732 aa		12.91	□□□□□ -0.34
SOX2-OT-231	ENST00000599082	RETREG3	Q86VR2	466 aa		12.91	□□□□□ -0.34
SOX2-OT-231	ENST00000599082	MTMR14	Q8NCE2	650 aa		12.91	□□□□□ -0.34
SOX2-OT-231	ENST00000599082	CLUAP1	Q96AJ1	413 aa		12.91	□□□□□ -0.34
SOX2-OT-231	ENST00000599082	NR1I2	O75469	434 aa		12.9	□□□□□ -0.34
SOX2-OT-231	ENST00000599082	CTDSPL2	Q05D32	466 aa		12.9	□□□□□ -0.34
SOX2-OT-231	ENST00000599082	BRICD5	Q6PL45	260 aa		12.9	□□□□□ -0.34
SOX2-OT-231	ENST00000599082	NYAP1	Q6ZVC0	841 aa		12.9	□□□□□ -0.34
SOX2-OT-231	ENST00000599082	PRR7	Q8TB68	274 aa		12.9	□□□□□ -0.34
SOX2-OT-231	ENST00000599082	SALL2	Q9Y467	1007 aa	Predicted RBP	12.9	□□□□□ -0.34
SOX2-OT-231	ENST00000599082	HELB	Q8NG08	1087 aa	Predicted RBP	12.89	□□□□□ -0.35
SOX2-OT-231	ENST00000599082	THAP11	Q96EK4	314 aa		12.89	□□□□□ -0.35
SOX2-OT-231	ENST00000599082		A6NJR5	290 aa		12.88	□□□□□ -0.35
SOX2-OT-231	ENST00000599082	SOCS7	O14512	581 aa		12.88	□□□□□ -0.35
SOX2-OT-231	ENST00000599082	TSC1	Q92574	1164 aa		12.88	□□□□□ -0.35
SOX2-OT-231	ENST00000599082	POM121	Q96HA1	1249 aa		12.88	□□□□□ -0.35
SOX2-OT-231	ENST00000599082	SUPT5H	O00267	1087 aa	Known RBP	12.86	□□□□□ -0.35
SOX2-OT-231	ENST00000599082	FMNL1	O95466	1100 aa	Predicted RBP	12.86	□□□□□ -0.35
SOX2-OT-231	ENST00000599082	COPS2	P61201	443 aa		12.86	□□□□□ -0.35
SOX2-OT-231	ENST00000599082	USB1	Q9BQ65	265 aa	Known RBP	12.86	□□□□□ -0.35
SOX2-OT-231	ENST00000599082	COG6	Q9Y2V7	657 aa		12.85	□□□□□ -0.35
SOX2-OT-231	ENST00000599082	DESI1	Q6ICB0	168 aa		12.83	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	LRRN4	Q8WUT4	740 aa		12.83	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	HMX1	Q9NP08	348 aa	Predicted RBP	12.83	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	RAD21	O60216	631 aa		12.82	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	GJD4	Q96KN9	370 aa	Predicted RBP	12.82	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	PER1	O15534	1290 aa	Predicted RBP	12.81	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	MTR	Q99707	1265 aa		12.81	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	APBB1	O00213	710 aa		12.8	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	ZPR1	O75312	459 aa		12.79	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	PROSER2	Q86WR7	435 aa	Predicted RBP	12.79	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	SPSB2	Q99619	263 aa		12.79	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	TRIM34	Q9BYJ4	488 aa		12.79	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	GDPD2	Q9HCC8	539 aa		12.79	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	TRAK2	O60296	914 aa		12.78	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	MSS51	Q4VC12	460 aa		12.78	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	TJAP1	Q5JTD0	557 aa		12.78	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	LYPD8	Q6UX82	237 aa		12.78	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	FNBP4	Q8N3X1	1017 aa	Predicted RBP	12.78	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	FAM160A2	Q8N612	972 aa	Predicted RBP	12.78	□□□□□ -0.36
SOX2-OT-231	ENST00000599082	TLL1	O43897	1013 aa		12.77	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	TBC1D2B	Q9UPU7	963 aa		12.77	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	JUND	P17535	347 aa		12.76	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	IL21	Q9HBE4	155 aa		12.76	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	EPS8L1	Q8TE68	723 aa		12.75	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	ZNF516	Q92618	1163 aa		12.75	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	PRM3	Q9NNZ6	103 aa		12.75	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	NDUFB9	Q9Y6M9	179 aa		12.75	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	ITGBL1	O95965	494 aa	Predicted RBP	12.74	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	ADH1B	P00325	375 aa		12.74	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	NR6A1	Q15406	480 aa		12.73	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	PRDM9	Q9NQV7	894 aa		12.73	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	DXO	O77932	396 aa	Known RBP	12.72	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	ABL2	P42684	1182 aa		12.72	□□□□□ -0.37
SOX2-OT-231	ENST00000599082		Q6ZNB5	142 aa		12.72	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	GPR37L1	O60883	481 aa		12.71	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	MMP16	P51512	607 aa		12.71	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	PTPRN	Q16849	979 aa		12.71	□□□□□ -0.37
SOX2-OT-231	ENST00000599082	ARID3C	A6NKF2	412 aa		12.7	□□□□□ -0.38
SOX2-OT-231	ENST00000599082	C1orf115	Q9H7X2	142 aa		12.7	□□□□□ -0.38
SOX2-OT-231	ENST00000599082	F12	P00748	615 aa	Predicted RBP	12.69	□□□□□ -0.38
SOX2-OT-231	ENST00000599082	IRF5	Q13568	498 aa		12.67	□□□□□ -0.38
SOX2-OT-231	ENST00000599082	NKX2-3	Q8TAU0	364 aa		12.67	□□□□□ -0.38
SOX2-OT-231	ENST00000599082	SLC6A16	Q9GZN6	736 aa		12.66	□□□□□ -0.38
SOX2-OT-231	ENST00000599082	MAP10	Q9P2G4	905 aa		12.66	□□□□□ -0.38
SOX2-OT-231	ENST00000599082	ZNF777	Q9ULD5	760 aa	Predicted RBP	12.66	□□□□□ -0.38
SOX2-OT-231	ENST00000599082	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.66	□□□□□ -0.38
SOX2-OT-231	ENST00000599082	CCNYL3	P0C7X3	344 aa		12.65	□□□□□ -0.38
SOX2-OT-231	ENST00000599082	WWC1	Q8IX03	1113 aa		12.65	□□□□□ -0.38
SOX2-OT-231	ENST00000599082	NUDT12	Q9BQG2	462 aa		12.65	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms