RNA–Protein interactions for RNA: ENST00000598996.2

FENDRR-205, FOXF1 adjacent non-coding developmental regulatory RNA, humanhuman

TSL 1 (best)

Gene FENDRR, Length 2,835 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FENDRR-205ENST00000598996 SHPRHQ149N8 1683 aa11.72□□□□□ -0.53
FENDRR-205ENST00000598996 NKTRP30414 1462 aaKnown RBP11.71□□□□□ -0.53
FENDRR-205ENST00000598996 CAMSAP1Q5T5Y3 1602 aa11.71□□□□□ -0.53
FENDRR-205ENST00000598996 USP32Q8NFA0 1604 aa11.71□□□□□ -0.53
FENDRR-205ENST00000598996 POLR3AO14802 1390 aaPredicted RBP11.71□□□□□ -0.53
FENDRR-205ENST00000598996 CCDC146Q8IYE0 955 aa11.71□□□□□ -0.54
FENDRR-205ENST00000598996 CD109Q6YHK3 1445 aa11.71□□□□□ -0.54
FENDRR-205ENST00000598996 APAF1O14727 1248 aa11.7□□□□□ -0.54
FENDRR-205ENST00000598996 SIGLEC1Q9BZZ2 1709 aa11.7□□□□□ -0.54
FENDRR-205ENST00000598996 NPM1P06748 294 aaKnown RBP eCLIP11.7□□□□□ -0.54
FENDRR-205ENST00000598996 C14orf93Q9H972 538 aaKnown RBP11.7□□□□□ -0.54
FENDRR-205ENST00000598996 ABCC3O15438 1527 aa11.7□□□□□ -0.54
FENDRR-205ENST00000598996 CENPQQ7L2Z9 268 aaPredicted RBP11.69□□□□□ -0.54
FENDRR-205ENST00000598996 PIK3C2BO00750 1634 aa11.69□□□□□ -0.54
FENDRR-205ENST00000598996 RPGRIP1LQ68CZ1 1315 aa11.69□□□□□ -0.54
FENDRR-205ENST00000598996 ARHGEF28Q8N1W1 1705 aaKnown RBP11.69□□□□□ -0.54
FENDRR-205ENST00000598996 E9PSI1 815 aa11.68□□□□□ -0.54
FENDRR-205ENST00000598996 ARXQ96QS3 562 aa11.68□□□□□ -0.54
FENDRR-205ENST00000598996 CHGAP10645 457 aaKnown RBP11.68□□□□□ -0.54
FENDRR-205ENST00000598996 NPM2Q86SE8 214 aaKnown RBP11.68□□□□□ -0.54
FENDRR-205ENST00000598996 SPINK5Q9NQ38 1064 aaPredicted RBP11.68□□□□□ -0.54
FENDRR-205ENST00000598996 NSD3Q9BZ95 1437 aa11.68□□□□□ -0.54
FENDRR-205ENST00000598996 GLI2P10070 1586 aa11.68□□□□□ -0.54
FENDRR-205ENST00000598996 NBR1Q14596 966 aa11.67□□□□□ -0.54
FENDRR-205ENST00000598996 GGT6Q6P531 493 aa11.67□□□□□ -0.54
FENDRR-205ENST00000598996 TRAK1Q9UPV9 953 aa11.67□□□□□ -0.54
FENDRR-205ENST00000598996 VIRMAQ69YN4 1812 aaKnown RBP11.65□□□□□ -0.54
FENDRR-205ENST00000598996 CNKSR2Q8WXI2 1034 aa11.65□□□□□ -0.54
FENDRR-205ENST00000598996 NEXMIFQ5QGS0 1516 aa11.65□□□□□ -0.54
FENDRR-205ENST00000598996 NEO1Q92859 1461 aa11.65□□□□□ -0.54
FENDRR-205ENST00000598996 TULP1O00294 542 aaPredicted RBP11.65□□□□□ -0.54
FENDRR-205ENST00000598996 SKAP1Q86WV1 359 aa11.65□□□□□ -0.54
FENDRR-205ENST00000598996 DEKP35659 375 aaKnown RBP11.64□□□□□ -0.55
FENDRR-205ENST00000598996 MORC1Q86VD1 984 aa11.64□□□□□ -0.55
FENDRR-205ENST00000598996 PUS7Q96PZ0 661 aaKnown RBP11.64□□□□□ -0.55
FENDRR-205ENST00000598996 SLC12A5Q9H2X9 1139 aa11.64□□□□□ -0.55
FENDRR-205ENST00000598996 DIP2CQ9Y2E4 1556 aa11.64□□□□□ -0.55
FENDRR-205ENST00000598996 MYO5BQ9ULV0 1848 aa11.64□□□□□ -0.55
FENDRR-205ENST00000598996 RICTORQ6R327 1708 aa11.64□□□□□ -0.55
FENDRR-205ENST00000598996 PKNOX2Q96KN3 472 aa11.64□□□□□ -0.55
FENDRR-205ENST00000598996 TMEM132EQ6IEE7 984 aa11.63□□□□□ -0.55
FENDRR-205ENST00000598996 WWC1Q8IX03 1113 aa11.63□□□□□ -0.55
FENDRR-205ENST00000598996 DMRT2Q9Y5R5 561 aa11.63□□□□□ -0.55
FENDRR-205ENST00000598996 BCAR3O75815 825 aa11.63□□□□□ -0.55
FENDRR-205ENST00000598996 NINLQ9Y2I6 1382 aa11.63□□□□□ -0.55
FENDRR-205ENST00000598996 IQSEC2Q5JU85 1478 aa11.63□□□□□ -0.55
FENDRR-205ENST00000598996 TULP4Q9NRJ4 1543 aa11.62□□□□□ -0.55
FENDRR-205ENST00000598996 ARHGAP31Q2M1Z3 1444 aa11.62□□□□□ -0.55
FENDRR-205ENST00000598996 DDRGK1Q96HY6 314 aa11.62□□□□□ -0.55
FENDRR-205ENST00000598996 PODXL2Q9NZ53 605 aa11.62□□□□□ -0.55
FENDRR-205ENST00000598996 CGNL1Q0VF96 1302 aa11.61□□□□□ -0.55
FENDRR-205ENST00000598996 PDE3AQ14432 1141 aa11.61□□□□□ -0.55
FENDRR-205ENST00000598996 RTL5Q5HYW3 569 aaPredicted RBP11.61□□□□□ -0.55
FENDRR-205ENST00000598996 RUNDC1Q96C34 613 aa11.61□□□□□ -0.55
FENDRR-205ENST00000598996 VGFO15240 615 aaPredicted RBP11.61□□□□□ -0.55
FENDRR-205ENST00000598996 NSD2O96028 1365 aa11.61□□□□□ -0.55
FENDRR-205ENST00000598996 EVC2Q86UK5 1308 aa11.6□□□□□ -0.55
FENDRR-205ENST00000598996 ANKRD36BQ8N2N9 1353 aa11.6□□□□□ -0.55
FENDRR-205ENST00000598996 FAM161AQ3B820 660 aa11.6□□□□□ -0.55
FENDRR-205ENST00000598996 ZFYVE9O95405 1425 aa11.59□□□□□ -0.55
FENDRR-205ENST00000598996 ANKRD26Q9UPS8 1709 aa11.59□□□□□ -0.55
FENDRR-205ENST00000598996 PREX1Q8TCU6 1659 aa11.59□□□□□ -0.55
FENDRR-205ENST00000598996 C8orf34Q49A92 452 aa11.59□□□□□ -0.55
FENDRR-205ENST00000598996 RAPGEF3O95398 923 aa11.58□□□□□ -0.56
FENDRR-205ENST00000598996 TNNT2P45379 298 aaPredicted RBP11.58□□□□□ -0.56
FENDRR-205ENST00000598996 MTHFSP49914 203 aa11.58□□□□□ -0.56
FENDRR-205ENST00000598996 VSIG10Q8N0Z9 540 aa11.58□□□□□ -0.56
FENDRR-205ENST00000598996 TCP11L2Q8N4U5 519 aa11.58□□□□□ -0.56
FENDRR-205ENST00000598996 CFAP53Q96M91 514 aa11.58□□□□□ -0.56
FENDRR-205ENST00000598996 CCDC27Q2M243 656 aa11.58□□□□□ -0.56
FENDRR-205ENST00000598996 WDR63Q8IWG1 891 aa11.58□□□□□ -0.56
FENDRR-205ENST00000598996 ADGRB2O60241 1585 aa11.57□□□□□ -0.56
FENDRR-205ENST00000598996 TMEM131LA2VDJ0 1609 aa11.57□□□□□ -0.56
FENDRR-205ENST00000598996 PPM1GO15355 546 aaPredicted RBP11.57□□□□□ -0.56
FENDRR-205ENST00000598996 USP35Q9P2H5 1018 aa11.57□□□□□ -0.56
FENDRR-205ENST00000598996 CLTCQ00610 1675 aaKnown RBP11.56□□□□□ -0.56
FENDRR-205ENST00000598996 PIAS4Q8N2W9 510 aaPredicted RBP11.56□□□□□ -0.56
FENDRR-205ENST00000598996 SLC52A1Q9NWF4 448 aa11.56□□□□□ -0.56
FENDRR-205ENST00000598996 IDI1Q13907 227 aa11.55□□□□□ -0.56
FENDRR-205ENST00000598996 NEUROD2Q15784 382 aa11.55□□□□□ -0.56
FENDRR-205ENST00000598996 NUTM2DQ5VT03 806 aaPredicted RBP11.55□□□□□ -0.56
FENDRR-205ENST00000598996 CLUAP1Q96AJ1 413 aa11.55□□□□□ -0.56
FENDRR-205ENST00000598996 CANXP27824 592 aaKnown RBP11.55□□□□□ -0.56
FENDRR-205ENST00000598996 RGS3P49796 1198 aa11.55□□□□□ -0.56
FENDRR-205ENST00000598996 RARSP54136 660 aaKnown RBP11.55□□□□□ -0.56
FENDRR-205ENST00000598996 RRP7AQ9Y3A4 280 aaKnown RBP11.55□□□□□ -0.56
FENDRR-205ENST00000598996 IGHDP01880 384 aa11.55□□□□□ -0.56
FENDRR-205ENST00000598996 AAMPQ13685 434 aa11.55□□□□□ -0.56
FENDRR-205ENST00000598996 LAS1LQ9Y4W2 734 aaKnown RBP11.55□□□□□ -0.56
FENDRR-205ENST00000598996 ABCC11Q96J66 1382 aa11.54□□□□□ -0.56
FENDRR-205ENST00000598996 PANK1Q8TE04 598 aa11.54□□□□□ -0.56
FENDRR-205ENST00000598996 CABP2Q9NPB3 220 aa11.54□□□□□ -0.56
FENDRR-205ENST00000598996 COG6Q9Y2V7 657 aa11.54□□□□□ -0.56
FENDRR-205ENST00000598996 PTPRMP28827 1452 aa11.53□□□□□ -0.56
FENDRR-205ENST00000598996 NEFMP07197 916 aa11.53□□□□□ -0.56
FENDRR-205ENST00000598996 A0A1W2PP64 1363 aa11.53□□□□□ -0.56
FENDRR-205ENST00000598996 YEATS2Q9ULM3 1422 aa11.53□□□□□ -0.56
FENDRR-205ENST00000598996 KIF20BQ96Q89 1820 aa11.52□□□□□ -0.57
FENDRR-205ENST00000598996 TRHP20396 242 aaPredicted RBP11.52□□□□□ -0.57
FENDRR-205ENST00000598996 MED14O60244 1454 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms