RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 QRICH2Q9H0J4 1663 aa26.95■■□□□ 1.9
LTBP4-223ENST00000598717 C14orf37Q86TY3 774 aa26.92■■□□□ 1.9
LTBP4-223ENST00000598717 STRCP1A6NGW2 1772 aa26.92■■□□□ 1.9
LTBP4-223ENST00000598717 RBM33Q96EV2 1170 aaKnown RBP26.91■■□□□ 1.9
LTBP4-223ENST00000598717 EVC2Q86UK5 1308 aa26.9■■□□□ 1.9
LTBP4-223ENST00000598717 CDCA8Q53HL2 280 aa26.89■■□□□ 1.9
LTBP4-223ENST00000598717 TMEM94Q12767 1356 aa26.87■■□□□ 1.89
LTBP4-223ENST00000598717 DISP3Q9P2K9 1392 aa26.85■■□□□ 1.89
LTBP4-223ENST00000598717 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.85■■□□□ 1.89
LTBP4-223ENST00000598717 NCOA3Q9Y6Q9 1424 aa26.85■■□□□ 1.89
LTBP4-223ENST00000598717 C11orf95C9JLR9 678 aaPredicted RBP26.85■■□□□ 1.89
LTBP4-223ENST00000598717 POLR3GLQ9BT43 218 aa26.85■■□□□ 1.89
LTBP4-223ENST00000598717 WASLO00401 505 aaPredicted RBP26.84■■□□□ 1.89
LTBP4-223ENST00000598717 CDK19Q9BWU1 502 aa26.84■■□□□ 1.89
LTBP4-223ENST00000598717 LRRC7Q96NW7 1537 aa26.84■■□□□ 1.89
LTBP4-223ENST00000598717 ADGRL3Q9HAR2 1447 aa26.83■■□□□ 1.89
LTBP4-223ENST00000598717 SRPK2P78362 688 aaKnown RBP26.83■■□□□ 1.89
LTBP4-223ENST00000598717 TULP4Q9NRJ4 1543 aa26.81■■□□□ 1.88
LTBP4-223ENST00000598717 C19orf44Q9H6X5 657 aa26.81■■□□□ 1.88
LTBP4-223ENST00000598717 KIF7Q2M1P5 1343 aa26.81■■□□□ 1.88
LTBP4-223ENST00000598717 ADGRB2O60241 1585 aa26.8■■□□□ 1.88
LTBP4-223ENST00000598717 CABP2Q9NPB3 220 aa26.8■■□□□ 1.88
LTBP4-223ENST00000598717 PUS7Q96PZ0 661 aaKnown RBP26.79■■□□□ 1.88
LTBP4-223ENST00000598717 WASHC2AQ641Q2 1341 aa26.79■■□□□ 1.88
LTBP4-223ENST00000598717 CCDC7Q96M83 1385 aa26.79■■□□□ 1.88
LTBP4-223ENST00000598717 LTBP4Q8N2S1 1624 aa26.78■■□□□ 1.88
LTBP4-223ENST00000598717 NALCNQ8IZF0 1738 aa26.77■■□□□ 1.88
LTBP4-223ENST00000598717 MSH6P52701 1360 aa26.77■■□□□ 1.88
LTBP4-223ENST00000598717 ATF3P18847 181 aa26.75■■□□□ 1.87
LTBP4-223ENST00000598717 CDC42BPGQ6DT37 1551 aa26.74■■□□□ 1.87
LTBP4-223ENST00000598717 ATAD2Q6PL18 1390 aa26.73■■□□□ 1.87
LTBP4-223ENST00000598717 NUTM2FA1L443 756 aa26.72■■□□□ 1.87
LTBP4-223ENST00000598717 CADPS2Q86UW7 1296 aa26.71■■□□□ 1.87
LTBP4-223ENST00000598717 NUDT16Q96DE0 195 aaKnown RBP26.71■■□□□ 1.87
LTBP4-223ENST00000598717 DCCP43146 1447 aa26.71■■□□□ 1.87
LTBP4-223ENST00000598717 TMC1Q8TDI8 760 aa26.7■■□□□ 1.86
LTBP4-223ENST00000598717 XIRP1Q702N8 1843 aaKnown RBP26.69■■□□□ 1.86
LTBP4-223ENST00000598717 CCDC61Q9Y6R9 512 aa26.68■■□□□ 1.86
LTBP4-223ENST00000598717 ANKARQ7Z5J8 1434 aa26.67■■□□□ 1.86
LTBP4-223ENST00000598717 PRR36Q9H6K5 1346 aa26.66■■□□□ 1.86
LTBP4-223ENST00000598717 FMN2Q9NZ56 1722 aa26.66■■□□□ 1.86
LTBP4-223ENST00000598717 ATP7BP35670 1465 aa26.65■■□□□ 1.86
LTBP4-223ENST00000598717 NINLQ9Y2I6 1382 aa26.64■■□□□ 1.86
LTBP4-223ENST00000598717 DDX10Q13206 875 aaKnown RBP26.64■■□□□ 1.86
LTBP4-223ENST00000598717 SLC12A5Q9H2X9 1139 aa26.63■■□□□ 1.85
LTBP4-223ENST00000598717 CABP1Q9NZU7 370 aa26.63■■□□□ 1.85
LTBP4-223ENST00000598717 PPIP5K1Q6PFW1 1433 aa26.62■■□□□ 1.85
LTBP4-223ENST00000598717 MST1RQ04912 1400 aa26.59■■□□□ 1.85
LTBP4-223ENST00000598717 USP32Q8NFA0 1604 aa26.59■■□□□ 1.85
LTBP4-223ENST00000598717 ESCO1Q5FWF5 840 aa26.59■■□□□ 1.85
LTBP4-223ENST00000598717 C1orf167Q5SNV9 1468 aa26.58■■□□□ 1.85
LTBP4-223ENST00000598717 TERF2IPQ9NYB0 399 aa26.58■■□□□ 1.85
LTBP4-223ENST00000598717 PLEKHG3A1L390 1219 aa26.57■■□□□ 1.84
LTBP4-223ENST00000598717 HDGFL2Q7Z4V5 671 aaPredicted RBP26.57■■□□□ 1.84
LTBP4-223ENST00000598717 CERKQ8TCT0 537 aa26.57■■□□□ 1.84
LTBP4-223ENST00000598717 PANK3Q9H999 370 aa26.57■■□□□ 1.84
LTBP4-223ENST00000598717 SLAIN2Q9P270 581 aa26.57■■□□□ 1.84
LTBP4-223ENST00000598717 PMFBP1Q8TBY8 1022 aa26.56■■□□□ 1.84
LTBP4-223ENST00000598717 PHF8Q9UPP1 1060 aa26.56■■□□□ 1.84
LTBP4-223ENST00000598717 MYOM1P52179 1685 aa26.56■■□□□ 1.84
LTBP4-223ENST00000598717 ITSN1Q15811 1721 aa26.56■■□□□ 1.84
LTBP4-223ENST00000598717 TOPAZ1Q8N9V7 1692 aa26.54■■□□□ 1.84
LTBP4-223ENST00000598717 NGDNQ8NEJ9 315 aaKnown RBP26.54■■□□□ 1.84
LTBP4-223ENST00000598717 ORAI2Q96SN7 254 aa26.54■■□□□ 1.84
LTBP4-223ENST00000598717 IQSEC2Q5JU85 1478 aa26.54■■□□□ 1.84
LTBP4-223ENST00000598717 ANKRD36BQ8N2N9 1353 aa26.53■■□□□ 1.84
LTBP4-223ENST00000598717 RGPD8O14715 1765 aaPredicted RBP26.53■■□□□ 1.84
LTBP4-223ENST00000598717 ACEP12821 1306 aa26.52■■□□□ 1.84
LTBP4-223ENST00000598717 TOM1O60784 492 aa26.51■■□□□ 1.83
LTBP4-223ENST00000598717 ZNF692Q9BU19 519 aaPredicted RBP26.51■■□□□ 1.83
LTBP4-223ENST00000598717 A0A1W2PP64 1363 aa26.49■■□□□ 1.83
LTBP4-223ENST00000598717 CD163L1Q9NR16 1453 aa26.48■■□□□ 1.83
LTBP4-223ENST00000598717 POLR3AO14802 1390 aaPredicted RBP26.47■■□□□ 1.83
LTBP4-223ENST00000598717 KTN1Q86UP2 1357 aaKnown RBP26.47■■□□□ 1.83
LTBP4-223ENST00000598717 KNSTRNQ9Y448 316 aa26.47■■□□□ 1.83
LTBP4-223ENST00000598717 CPSF1Q10570 1443 aaKnown RBP26.47■■□□□ 1.83
LTBP4-223ENST00000598717 UBAP1LF5GYI3 381 aa26.46■■□□□ 1.83
LTBP4-223ENST00000598717 BRINP3Q76B58 766 aa26.46■■□□□ 1.83
LTBP4-223ENST00000598717 PSME1Q06323 249 aa26.45■■□□□ 1.82
LTBP4-223ENST00000598717 KIF1AQ12756 1690 aa26.44■■□□□ 1.82
LTBP4-223ENST00000598717 FOXO3O43524 673 aa26.44■■□□□ 1.82
LTBP4-223ENST00000598717 CARD14Q9BXL6 1004 aa26.44■■□□□ 1.82
LTBP4-223ENST00000598717 NSD3Q9BZ95 1437 aa26.43■■□□□ 1.82
LTBP4-223ENST00000598717 PER1O15534 1290 aaPredicted RBP26.42■■□□□ 1.82
LTBP4-223ENST00000598717 DIEXFQ68CQ4 756 aaKnown RBP26.42■■□□□ 1.82
LTBP4-223ENST00000598717 NPHP3Q7Z494 1330 aa26.4■■□□□ 1.82
LTBP4-223ENST00000598717 USP6P35125 1406 aa26.4■■□□□ 1.82
LTBP4-223ENST00000598717 EDC4Q6P2E9 1401 aaKnown RBP26.39■■□□□ 1.82
LTBP4-223ENST00000598717 AKAP12Q02952 1782 aa26.39■■□□□ 1.82
LTBP4-223ENST00000598717 PIP4K2BP78356 416 aa26.39■■□□□ 1.82
LTBP4-223ENST00000598717 SCAF1Q9H7N4 1312 aaKnown RBP26.39■■□□□ 1.81
LTBP4-223ENST00000598717 KRT28Q7Z3Y7 464 aa26.38■■□□□ 1.81
LTBP4-223ENST00000598717 CGNL1Q0VF96 1302 aa26.38■■□□□ 1.81
LTBP4-223ENST00000598717 BRD4O60885 1362 aaPredicted RBP26.37■■□□□ 1.81
LTBP4-223ENST00000598717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.37■■□□□ 1.81
LTBP4-223ENST00000598717 XPCQ01831 940 aaPredicted RBP26.36■■□□□ 1.81
LTBP4-223ENST00000598717 MON2Q7Z3U7 1717 aa26.36■■□□□ 1.81
LTBP4-223ENST00000598717 TTC21BQ7Z4L5 1316 aa26.36■■□□□ 1.81
LTBP4-223ENST00000598717 PAK3O75914 559 aaPredicted RBP26.35■■□□□ 1.81
LTBP4-223ENST00000598717 DDX17Q92841 729 aaKnown RBP26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms