RNA–Protein interactions for RNA: ENST00000598411.1

SOD3-203, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 276 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-203ENST00000598411 CDC42BPGQ6DT37 1551 aa11.61□□□□□ -0.55
SOD3-203ENST00000598411 ADGRF5Q8IZF2 1346 aa11.6□□□□□ -0.55
SOD3-203ENST00000598411 SPATA31E1Q6ZUB1 1445 aa11.6□□□□□ -0.55
SOD3-203ENST00000598411 KNDC1Q76NI1 1749 aa11.6□□□□□ -0.55
SOD3-203ENST00000598411 FMN2Q9NZ56 1722 aa11.6□□□□□ -0.55
SOD3-203ENST00000598411 ADAMTS2O95450 1211 aa11.6□□□□□ -0.55
SOD3-203ENST00000598411 QTRT2Q9H974 415 aaKnown RBP11.6□□□□□ -0.55
SOD3-203ENST00000598411 ABCA3Q99758 1704 aa11.6□□□□□ -0.55
SOD3-203ENST00000598411 HFM1A2PYH4 1435 aa11.6□□□□□ -0.55
SOD3-203ENST00000598411 ATRNO75882 1429 aa11.6□□□□□ -0.55
SOD3-203ENST00000598411 GLI3P10071 1580 aa11.59□□□□□ -0.55
SOD3-203ENST00000598411 XPCQ01831 940 aaPredicted RBP11.59□□□□□ -0.55
SOD3-203ENST00000598411 LRRC59Q96AG4 307 aaKnown RBP11.58□□□□□ -0.56
SOD3-203ENST00000598411 USP32Q8NFA0 1604 aa11.57□□□□□ -0.56
SOD3-203ENST00000598411 WAPLQ7Z5K2 1190 aa11.57□□□□□ -0.56
SOD3-203ENST00000598411 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.57□□□□□ -0.56
SOD3-203ENST00000598411 TECPR2O15040 1411 aa11.56□□□□□ -0.56
SOD3-203ENST00000598411 RBM6P78332 1123 aaKnown RBP11.56□□□□□ -0.56
SOD3-203ENST00000598411 FNBP4Q8N3X1 1017 aaPredicted RBP11.55□□□□□ -0.56
SOD3-203ENST00000598411 NUTM2FA1L443 756 aa11.54□□□□□ -0.56
SOD3-203ENST00000598411 TMEM132EQ6IEE7 984 aa11.54□□□□□ -0.56
SOD3-203ENST00000598411 PIK3C2GO75747 1445 aa11.53□□□□□ -0.56
SOD3-203ENST00000598411 PLCH1Q4KWH8 1693 aa11.53□□□□□ -0.56
SOD3-203ENST00000598411 NGLY1Q96IV0 654 aa11.53□□□□□ -0.56
SOD3-203ENST00000598411 TRPM3Q9HCF6 1732 aaPredicted RBP11.52□□□□□ -0.56
SOD3-203ENST00000598411 CRYBG1Q9Y4K1 1723 aa11.52□□□□□ -0.56
SOD3-203ENST00000598411 SLIT2O94813 1529 aa11.52□□□□□ -0.57
SOD3-203ENST00000598411 FOXO3O43524 673 aa11.52□□□□□ -0.57
SOD3-203ENST00000598411 USP21Q9UK80 565 aa11.52□□□□□ -0.57
SOD3-203ENST00000598411 SLC4A1APQ9BWU0 796 aaKnown RBP11.51□□□□□ -0.57
SOD3-203ENST00000598411 STK26Q9P289 416 aa11.51□□□□□ -0.57
SOD3-203ENST00000598411 NRAPQ86VF7 1730 aa11.51□□□□□ -0.57
SOD3-203ENST00000598411 LRPPRCP42704 1394 aaKnown RBP11.51□□□□□ -0.57
SOD3-203ENST00000598411 NRXN1Q9ULB1 1477 aa11.51□□□□□ -0.57
SOD3-203ENST00000598411 VGFO15240 615 aaPredicted RBP11.5□□□□□ -0.57
SOD3-203ENST00000598411 RALGAPBQ86X10 1494 aa11.5□□□□□ -0.57
SOD3-203ENST00000598411 RGL3Q3MIN7 710 aa11.49□□□□□ -0.57
SOD3-203ENST00000598411 ESCO1Q5FWF5 840 aa11.49□□□□□ -0.57
SOD3-203ENST00000598411 RPGRIP1LQ68CZ1 1315 aa11.49□□□□□ -0.57
SOD3-203ENST00000598411 ABCC11Q96J66 1382 aa11.49□□□□□ -0.57
SOD3-203ENST00000598411 KIF1AQ12756 1690 aa11.49□□□□□ -0.57
SOD3-203ENST00000598411 YTHDC2Q9H6S0 1430 aaKnown RBP11.48□□□□□ -0.57
SOD3-203ENST00000598411 ADGRB1O14514 1584 aa11.48□□□□□ -0.57
SOD3-203ENST00000598411 ALS2Q96Q42 1657 aa11.48□□□□□ -0.57
SOD3-203ENST00000598411 NWD2Q9ULI1 1742 aa11.47□□□□□ -0.57
SOD3-203ENST00000598411 SPATA31A3Q5VYP0 1347 aa11.47□□□□□ -0.57
SOD3-203ENST00000598411 CABLES1Q8TDN4 633 aa11.47□□□□□ -0.57
SOD3-203ENST00000598411 TRPC5Q9UL62 973 aaPredicted RBP11.47□□□□□ -0.57
SOD3-203ENST00000598411 ATAD2Q6PL18 1390 aa11.46□□□□□ -0.57
SOD3-203ENST00000598411 MPHOSPH9Q99550 1183 aa11.46□□□□□ -0.57
SOD3-203ENST00000598411 NPHP3Q7Z494 1330 aa11.45□□□□□ -0.58
SOD3-203ENST00000598411 GJD4Q96KN9 370 aaPredicted RBP11.45□□□□□ -0.58
SOD3-203ENST00000598411 CCDC144AA2RUR9 1427 aa11.44□□□□□ -0.58
SOD3-203ENST00000598411 CFAP70Q5T0N1 1121 aa11.44□□□□□ -0.58
SOD3-203ENST00000598411 DEFB132Q7Z7B7 95 aa11.44□□□□□ -0.58
SOD3-203ENST00000598411 PRR36Q9H6K5 1346 aa11.43□□□□□ -0.58
SOD3-203ENST00000598411 ADGRB2O60241 1585 aa11.43□□□□□ -0.58
SOD3-203ENST00000598411 TNS3Q68CZ2 1445 aa11.43□□□□□ -0.58
SOD3-203ENST00000598411 C14orf93Q9H972 538 aaKnown RBP11.42□□□□□ -0.58
SOD3-203ENST00000598411 TNS1Q9HBL0 1735 aaKnown RBP11.42□□□□□ -0.58
SOD3-203ENST00000598411 ANKRD30BQ9BXX2 1392 aa11.41□□□□□ -0.58
SOD3-203ENST00000598411 ARHGEF28Q8N1W1 1705 aaKnown RBP11.41□□□□□ -0.58
SOD3-203ENST00000598411 PLEKHG5O94827 1062 aa11.41□□□□□ -0.58
SOD3-203ENST00000598411 SAFB2Q14151 953 aaKnown RBP eCLIP11.41□□□□□ -0.58
SOD3-203ENST00000598411 KRT28Q7Z3Y7 464 aa11.41□□□□□ -0.58
SOD3-203ENST00000598411 FAM83GA6ND36 823 aa11.4□□□□□ -0.58
SOD3-203ENST00000598411 UNC5CLQ8IV45 518 aa11.4□□□□□ -0.58
SOD3-203ENST00000598411 DLC1Q96QB1 1528 aa11.4□□□□□ -0.59
SOD3-203ENST00000598411 THSD7AQ9UPZ6 1657 aa11.4□□□□□ -0.59
SOD3-203ENST00000598411 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
SOD3-203ENST00000598411 PRAM1Q96QH2 718 aa11.38□□□□□ -0.59
SOD3-203ENST00000598411 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
SOD3-203ENST00000598411 LRP5O75197 1615 aa11.38□□□□□ -0.59
SOD3-203ENST00000598411 BLMP54132 1417 aaPredicted RBP11.37□□□□□ -0.59
SOD3-203ENST00000598411 FAM182BQ5T319 152 aa11.37□□□□□ -0.59
SOD3-203ENST00000598411 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
SOD3-203ENST00000598411 PMFBP1Q8TBY8 1022 aa11.37□□□□□ -0.59
SOD3-203ENST00000598411 SIRT1Q96EB6 747 aa11.37□□□□□ -0.59
SOD3-203ENST00000598411 PHRF1Q9P1Y6 1649 aaKnown RBP11.37□□□□□ -0.59
SOD3-203ENST00000598411 SBNO1A3KN83 1393 aa11.37□□□□□ -0.59
SOD3-203ENST00000598411 TOPAZ1Q8N9V7 1692 aa11.36□□□□□ -0.59
SOD3-203ENST00000598411 VPS72Q15906 364 aa11.36□□□□□ -0.59
SOD3-203ENST00000598411 HIRIP3Q9BW71 556 aaPredicted RBP11.36□□□□□ -0.59
SOD3-203ENST00000598411 COL14A1Q05707 1796 aaKnown RBP11.36□□□□□ -0.59
SOD3-203ENST00000598411 DHX57Q6P158 1386 aaKnown RBP11.35□□□□□ -0.59
SOD3-203ENST00000598411 ATP7BP35670 1465 aa11.34□□□□□ -0.59
SOD3-203ENST00000598411 RAB3GAP2Q9H2M9 1393 aa11.34□□□□□ -0.59
SOD3-203ENST00000598411 TULP4Q9NRJ4 1543 aa11.34□□□□□ -0.59
SOD3-203ENST00000598411 ANKARQ7Z5J8 1434 aa11.34□□□□□ -0.59
SOD3-203ENST00000598411 MINK1Q8N4C8 1332 aaPredicted RBP11.33□□□□□ -0.6
SOD3-203ENST00000598411 RGPD1P0DJD0 1748 aa11.32□□□□□ -0.6
SOD3-203ENST00000598411 ZRANB1Q9UGI0 708 aa11.32□□□□□ -0.6
SOD3-203ENST00000598411 ACIN1Q9UKV3 1341 aaKnown RBP11.32□□□□□ -0.6
SOD3-203ENST00000598411 LMO7Q8WWI1 1683 aa11.31□□□□□ -0.6
SOD3-203ENST00000598411 PSDA5PKW4 1024 aaPredicted RBP11.31□□□□□ -0.6
SOD3-203ENST00000598411 TRAK1Q9UPV9 953 aa11.31□□□□□ -0.6
SOD3-203ENST00000598411 RREB1Q92766 1687 aa11.3□□□□□ -0.6
SOD3-203ENST00000598411 ITSN1Q15811 1721 aa11.3□□□□□ -0.6
SOD3-203ENST00000598411 NUP188Q5SRE5 1749 aa11.3□□□□□ -0.6
SOD3-203ENST00000598411 NRKQ7Z2Y5 1582 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms