RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 ANKRD30BQ9BXX2 1392 aa15.7■□□□□ 0.1
LSM4-205ENST00000597776 TMEM132EQ6IEE7 984 aa15.69■□□□□ 0.1
LSM4-205ENST00000597776 WAPLQ7Z5K2 1190 aa15.69■□□□□ 0.1
LSM4-205ENST00000597776 PIK3C2GO75747 1445 aa15.68■□□□□ 0.1
LSM4-205ENST00000597776 LRPPRCP42704 1394 aaKnown RBP15.68■□□□□ 0.1
LSM4-205ENST00000597776 PLEKHH1Q9ULM0 1364 aa15.68■□□□□ 0.1
LSM4-205ENST00000597776 TECPR2O15040 1411 aa15.68■□□□□ 0.1
LSM4-205ENST00000597776 CDK12Q9NYV4 1490 aaPredicted RBP15.67■□□□□ 0.1
LSM4-205ENST00000597776 NUTM2FA1L443 756 aa15.67■□□□□ 0.1
LSM4-205ENST00000597776 ESCO1Q5FWF5 840 aa15.67■□□□□ 0.1
LSM4-205ENST00000597776 UPF1Q92900 1129 aaKnown RBP eCLIP15.67■□□□□ 0.1
LSM4-205ENST00000597776 NGLY1Q96IV0 654 aa15.66■□□□□ 0.1
LSM4-205ENST00000597776 QTRT2Q9H974 415 aaKnown RBP15.66■□□□□ 0.1
LSM4-205ENST00000597776 KNDC1Q76NI1 1749 aa15.65■□□□□ 0.1
LSM4-205ENST00000597776 ABCC11Q96J66 1382 aa15.65■□□□□ 0.1
LSM4-205ENST00000597776 XPCQ01831 940 aaPredicted RBP15.65■□□□□ 0.1
LSM4-205ENST00000597776 RGS12O14924 1447 aa15.65■□□□□ 0.1
LSM4-205ENST00000597776 PXDNQ92626 1479 aa15.65■□□□□ 0.1
LSM4-205ENST00000597776 YTHDC2Q9H6S0 1430 aaKnown RBP15.64■□□□□ 0.09
LSM4-205ENST00000597776 COL22A1Q8NFW1 1626 aaPredicted RBP15.64■□□□□ 0.09
LSM4-205ENST00000597776 NPHP3Q7Z494 1330 aa15.64■□□□□ 0.09
LSM4-205ENST00000597776 FOXO3O43524 673 aa15.63■□□□□ 0.09
LSM4-205ENST00000597776 RBM6P78332 1123 aaKnown RBP15.63■□□□□ 0.09
LSM4-205ENST00000597776 RAB3GAP2Q9H2M9 1393 aa15.62■□□□□ 0.09
LSM4-205ENST00000597776 MYOM2P54296 1465 aa15.62■□□□□ 0.09
LSM4-205ENST00000597776 NRXN1Q9ULB1 1477 aa15.61■□□□□ 0.09
LSM4-205ENST00000597776 FMN2Q9NZ56 1722 aa15.61■□□□□ 0.09
LSM4-205ENST00000597776 USP21Q9UK80 565 aa15.61■□□□□ 0.09
LSM4-205ENST00000597776 CFAP70Q5T0N1 1121 aa15.6■□□□□ 0.09
LSM4-205ENST00000597776 C14orf93Q9H972 538 aaKnown RBP15.6■□□□□ 0.09
LSM4-205ENST00000597776 FNBP4Q8N3X1 1017 aaPredicted RBP15.58■□□□□ 0.08
LSM4-205ENST00000597776 ACIN1Q9UKV3 1341 aaKnown RBP15.58■□□□□ 0.08
LSM4-205ENST00000597776 SAFB2Q14151 953 aaKnown RBP eCLIP15.57■□□□□ 0.08
LSM4-205ENST00000597776 DHX57Q6P158 1386 aaKnown RBP15.57■□□□□ 0.08
LSM4-205ENST00000597776 KIF1AQ12756 1690 aa15.57■□□□□ 0.08
LSM4-205ENST00000597776 TRPC5Q9UL62 973 aaPredicted RBP15.56■□□□□ 0.08
LSM4-205ENST00000597776 ATRNO75882 1429 aa15.56■□□□□ 0.08
LSM4-205ENST00000597776 SIRT1Q96EB6 747 aa15.55■□□□□ 0.08
LSM4-205ENST00000597776 PRAM1Q96QH2 718 aa15.55■□□□□ 0.08
LSM4-205ENST00000597776 MARF1Q9Y4F3 1742 aaKnown RBP15.54■□□□□ 0.08
LSM4-205ENST00000597776 BCL9LQ86UU0 1499 aa15.54■□□□□ 0.08
LSM4-205ENST00000597776 SPATA31A3Q5VYP0 1347 aa15.54■□□□□ 0.08
LSM4-205ENST00000597776 RGPD8O14715 1765 aaPredicted RBP15.54■□□□□ 0.08
LSM4-205ENST00000597776 KRT28Q7Z3Y7 464 aa15.53■□□□□ 0.08
LSM4-205ENST00000597776 PHF8Q9UPP1 1060 aa15.52■□□□□ 0.08
LSM4-205ENST00000597776 ADGRB1O14514 1584 aa15.52■□□□□ 0.07
LSM4-205ENST00000597776 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
LSM4-205ENST00000597776 POGKQ9P215 609 aa15.51■□□□□ 0.07
LSM4-205ENST00000597776 DLC1Q96QB1 1528 aa15.51■□□□□ 0.07
LSM4-205ENST00000597776 ATAD2Q6PL18 1390 aa15.5■□□□□ 0.07
LSM4-205ENST00000597776 EP400Q96L91 3159 aa15.5■□□□□ 0.07
LSM4-205ENST00000597776 KDM2AQ9Y2K7 1162 aa15.5■□□□□ 0.07
LSM4-205ENST00000597776 TNS3Q68CZ2 1445 aa15.5■□□□□ 0.07
LSM4-205ENST00000597776 USP32Q8NFA0 1604 aa15.5■□□□□ 0.07
LSM4-205ENST00000597776 CABLES1Q8TDN4 633 aa15.49■□□□□ 0.07
LSM4-205ENST00000597776 TRAK1Q9UPV9 953 aa15.49■□□□□ 0.07
LSM4-205ENST00000597776 ADGRB2O60241 1585 aa15.49■□□□□ 0.07
LSM4-205ENST00000597776 DCAF11Q8TEB1 546 aa15.48■□□□□ 0.07
LSM4-205ENST00000597776 HIRIP3Q9BW71 556 aaPredicted RBP15.48■□□□□ 0.07
LSM4-205ENST00000597776 SLIT2O94813 1529 aa15.48■□□□□ 0.07
LSM4-205ENST00000597776 LMOD2Q6P5Q4 547 aa15.47■□□□□ 0.07
LSM4-205ENST00000597776 ANKARQ7Z5J8 1434 aa15.47■□□□□ 0.07
LSM4-205ENST00000597776 PMFBP1Q8TBY8 1022 aa15.47■□□□□ 0.07
LSM4-205ENST00000597776 GJD4Q96KN9 370 aaPredicted RBP15.47■□□□□ 0.07
LSM4-205ENST00000597776 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.47■□□□□ 0.07
LSM4-205ENST00000597776 MINK1Q8N4C8 1332 aaPredicted RBP15.46■□□□□ 0.07
LSM4-205ENST00000597776 HAP1P54257 671 aaPredicted RBP15.46■□□□□ 0.07
LSM4-205ENST00000597776 PSME1Q06323 249 aa15.46■□□□□ 0.07
LSM4-205ENST00000597776 UNC5CLQ8IV45 518 aa15.46■□□□□ 0.07
LSM4-205ENST00000597776 SBNO1A3KN83 1393 aa15.46■□□□□ 0.07
LSM4-205ENST00000597776 RALGAPBQ86X10 1494 aa15.46■□□□□ 0.06
LSM4-205ENST00000597776 ABCA3Q99758 1704 aa15.46■□□□□ 0.06
LSM4-205ENST00000597776 GLI3P10071 1580 aa15.45■□□□□ 0.06
LSM4-205ENST00000597776 PRR36Q9H6K5 1346 aa15.44■□□□□ 0.06
LSM4-205ENST00000597776 ARHGEF10O15013 1369 aa15.43■□□□□ 0.06
LSM4-205ENST00000597776 TULP4Q9NRJ4 1543 aa15.43■□□□□ 0.06
LSM4-205ENST00000597776 PLCH1Q4KWH8 1693 aa15.42■□□□□ 0.06
LSM4-205ENST00000597776 SRCAPQ6ZRS2 3230 aa15.42■□□□□ 0.06
LSM4-205ENST00000597776 TRPM3Q9HCF6 1732 aaPredicted RBP15.42■□□□□ 0.06
LSM4-205ENST00000597776 HRCP23327 699 aa15.41■□□□□ 0.06
LSM4-205ENST00000597776 EIF3AQ14152 1382 aaKnown RBP15.4■□□□□ 0.06
LSM4-205ENST00000597776 WASLO00401 505 aaPredicted RBP15.4■□□□□ 0.06
LSM4-205ENST00000597776 ARHGEF28Q8N1W1 1705 aaKnown RBP15.4■□□□□ 0.06
LSM4-205ENST00000597776 ALS2Q96Q42 1657 aa15.39■□□□□ 0.05
LSM4-205ENST00000597776 VPS72Q15906 364 aa15.39■□□□□ 0.05
LSM4-205ENST00000597776 CCDC9Q9Y3X0 531 aaKnown RBP15.39■□□□□ 0.05
LSM4-205ENST00000597776 NWD2Q9ULI1 1742 aa15.39■□□□□ 0.05
LSM4-205ENST00000597776 GPRASP1Q5JY77 1395 aa15.38■□□□□ 0.05
LSM4-205ENST00000597776 FAM83GA6ND36 823 aa15.38■□□□□ 0.05
LSM4-205ENST00000597776 STAC3Q96MF2 364 aa15.38■□□□□ 0.05
LSM4-205ENST00000597776 BRWD3Q6RI45 1802 aa15.38■□□□□ 0.05
LSM4-205ENST00000597776 SEPT12Q8IYM1 358 aa15.37■□□□□ 0.05
LSM4-205ENST00000597776 ATP7BP35670 1465 aa15.36■□□□□ 0.05
LSM4-205ENST00000597776 NGDNQ8NEJ9 315 aaKnown RBP15.36■□□□□ 0.05
LSM4-205ENST00000597776 NRAPQ86VF7 1730 aa15.35■□□□□ 0.05
LSM4-205ENST00000597776 PAK3O75914 559 aaPredicted RBP15.35■□□□□ 0.05
LSM4-205ENST00000597776 CCDC125Q86Z20 511 aa15.35■□□□□ 0.05
LSM4-205ENST00000597776 NUDT16Q96DE0 195 aaKnown RBP15.34■□□□□ 0.05
LSM4-205ENST00000597776 CRYBG1Q9Y4K1 1723 aa15.34■□□□□ 0.05
LSM4-205ENST00000597776 BLMP54132 1417 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms