RNA–Protein interactions for RNA: ENST00000597390.5

PRKD2-208, Transcript of protein kinase D2, humanhuman

TSL 1 (best)

Gene PRKD2, Length 1,367 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-208ENST00000597390 ASXL1Q8IXJ9 1541 aa19.54■□□□□ 0.72
PRKD2-208ENST00000597390 ZEB1P37275 1124 aaPredicted RBP19.53■□□□□ 0.72
PRKD2-208ENST00000597390 LAMC1P11047 1609 aa19.53■□□□□ 0.72
PRKD2-208ENST00000597390 KNDC1Q76NI1 1749 aa19.53■□□□□ 0.72
PRKD2-208ENST00000597390 NHSL1Q5SYE7 1610 aa19.52■□□□□ 0.72
PRKD2-208ENST00000597390 C14orf93Q9H972 538 aaKnown RBP19.51■□□□□ 0.71
PRKD2-208ENST00000597390 TECPR2O15040 1411 aa19.51■□□□□ 0.71
PRKD2-208ENST00000597390 SHPRHQ149N8 1683 aa19.5■□□□□ 0.71
PRKD2-208ENST00000597390 LRPPRCP42704 1394 aaKnown RBP19.5■□□□□ 0.71
PRKD2-208ENST00000597390 CFAP70Q5T0N1 1121 aa19.5■□□□□ 0.71
PRKD2-208ENST00000597390 RALGAPBQ86X10 1494 aa19.49■□□□□ 0.71
PRKD2-208ENST00000597390 ADGRB1O14514 1584 aa19.49■□□□□ 0.71
PRKD2-208ENST00000597390 C1orf167Q5SNV9 1468 aa19.49■□□□□ 0.71
PRKD2-208ENST00000597390 ABCC11Q96J66 1382 aa19.48■□□□□ 0.71
PRKD2-208ENST00000597390 TMEM132EQ6IEE7 984 aa19.47■□□□□ 0.71
PRKD2-208ENST00000597390 STK26Q9P289 416 aa19.47■□□□□ 0.71
PRKD2-208ENST00000597390 CDC42BPGQ6DT37 1551 aa19.46■□□□□ 0.71
PRKD2-208ENST00000597390 YTHDC2Q9H6S0 1430 aaKnown RBP19.46■□□□□ 0.71
PRKD2-208ENST00000597390 NBPF1Q3BBV0 1214 aa19.46■□□□□ 0.71
PRKD2-208ENST00000597390 SPATA31A6Q5VVP1 1343 aa19.46■□□□□ 0.71
PRKD2-208ENST00000597390 GPRASP1Q5JY77 1395 aa19.45■□□□□ 0.7
PRKD2-208ENST00000597390 WAPLQ7Z5K2 1190 aa19.43■□□□□ 0.7
PRKD2-208ENST00000597390 LRRC59Q96AG4 307 aaKnown RBP19.42■□□□□ 0.7
PRKD2-208ENST00000597390 SIRT1Q96EB6 747 aa19.42■□□□□ 0.7
PRKD2-208ENST00000597390 ROCK2O75116 1388 aaKnown RBP19.42■□□□□ 0.7
PRKD2-208ENST00000597390 LRP6O75581 1613 aa19.41■□□□□ 0.7
PRKD2-208ENST00000597390 DDX17Q92841 729 aaKnown RBP19.41■□□□□ 0.7
PRKD2-208ENST00000597390 ORAI2Q96SN7 254 aa19.41■□□□□ 0.7
PRKD2-208ENST00000597390 PLEKHH1Q9ULM0 1364 aa19.41■□□□□ 0.7
PRKD2-208ENST00000597390 FMN2Q9NZ56 1722 aa19.38■□□□□ 0.69
PRKD2-208ENST00000597390 UPF1Q92900 1129 aaKnown RBP eCLIP19.37■□□□□ 0.69
PRKD2-208ENST00000597390 DLC1Q96QB1 1528 aa19.37■□□□□ 0.69
PRKD2-208ENST00000597390 SOS2Q07890 1332 aaPredicted RBP19.36■□□□□ 0.69
PRKD2-208ENST00000597390 MEX3CQ5U5Q3 659 aaKnown RBP19.36■□□□□ 0.69
PRKD2-208ENST00000597390 CARD11Q9BXL7 1154 aa19.36■□□□□ 0.69
PRKD2-208ENST00000597390 PNPLA6Q8IY17 1366 aa19.35■□□□□ 0.69
PRKD2-208ENST00000597390 ESCO1Q5FWF5 840 aa19.35■□□□□ 0.69
PRKD2-208ENST00000597390 ARHGEF28Q8N1W1 1705 aaKnown RBP19.34■□□□□ 0.69
PRKD2-208ENST00000597390 NUTM2BA6NNL0 878 aaPredicted RBP19.33■□□□□ 0.69
PRKD2-208ENST00000597390 NUTM2EB1AL46 878 aaPredicted RBP19.33■□□□□ 0.69
PRKD2-208ENST00000597390 NUTM2AQ8IVF1 878 aaPredicted RBP19.33■□□□□ 0.69
PRKD2-208ENST00000597390 NPHP3Q7Z494 1330 aa19.32■□□□□ 0.68
PRKD2-208ENST00000597390 NUTM2FA1L443 756 aa19.32■□□□□ 0.68
PRKD2-208ENST00000597390 PRAM1Q96QH2 718 aa19.32■□□□□ 0.68
PRKD2-208ENST00000597390 KIF1AQ12756 1690 aa19.31■□□□□ 0.68
PRKD2-208ENST00000597390 TRAK1Q9UPV9 953 aa19.31■□□□□ 0.68
PRKD2-208ENST00000597390 RGPD8O14715 1765 aaPredicted RBP19.3■□□□□ 0.68
PRKD2-208ENST00000597390 ZNF772Q68DY9 489 aaPredicted RBP19.3■□□□□ 0.68
PRKD2-208ENST00000597390 POGKQ9P215 609 aa19.3■□□□□ 0.68
PRKD2-208ENST00000597390 USP47Q96K76 1375 aa19.29■□□□□ 0.68
PRKD2-208ENST00000597390 PXDNQ92626 1479 aa19.29■□□□□ 0.68
PRKD2-208ENST00000597390 ADGRB2O60241 1585 aa19.29■□□□□ 0.68
PRKD2-208ENST00000597390 SAFB2Q14151 953 aaKnown RBP eCLIP19.29■□□□□ 0.68
PRKD2-208ENST00000597390 COL22A1Q8NFW1 1626 aaPredicted RBP19.28■□□□□ 0.68
PRKD2-208ENST00000597390 FOXO3O43524 673 aa19.28■□□□□ 0.68
PRKD2-208ENST00000597390 QRICH2Q9H0J4 1663 aa19.25■□□□□ 0.67
PRKD2-208ENST00000597390 EIF3AQ14152 1382 aaKnown RBP19.24■□□□□ 0.67
PRKD2-208ENST00000597390 EIF4G2P78344 907 aaKnown RBP eCLIP19.24■□□□□ 0.67
PRKD2-208ENST00000597390 AFF2P51816 1311 aa19.24■□□□□ 0.67
PRKD2-208ENST00000597390 ST20-MTHFSA0A0A6YYL1 179 aa19.23■□□□□ 0.67
PRKD2-208ENST00000597390 HSPA5P11021 654 aaKnown RBP19.23■□□□□ 0.67
PRKD2-208ENST00000597390 XPCQ01831 940 aaPredicted RBP19.23■□□□□ 0.67
PRKD2-208ENST00000597390 ANKARQ7Z5J8 1434 aa19.23■□□□□ 0.67
PRKD2-208ENST00000597390 USP32Q8NFA0 1604 aa19.23■□□□□ 0.67
PRKD2-208ENST00000597390 C8orf37Q96NL8 207 aa19.22■□□□□ 0.67
PRKD2-208ENST00000597390 PHF8Q9UPP1 1060 aa19.22■□□□□ 0.67
PRKD2-208ENST00000597390 CENPJQ9HC77 1338 aaPredicted RBP19.22■□□□□ 0.67
PRKD2-208ENST00000597390 ADAMTS2O95450 1211 aa19.2■□□□□ 0.66
PRKD2-208ENST00000597390 TESK2Q96S53 571 aa19.2■□□□□ 0.66
PRKD2-208ENST00000597390 MINK1Q8N4C8 1332 aaPredicted RBP19.2■□□□□ 0.66
PRKD2-208ENST00000597390 MARF1Q9Y4F3 1742 aaKnown RBP19.2■□□□□ 0.66
PRKD2-208ENST00000597390 KRT28Q7Z3Y7 464 aa19.19■□□□□ 0.66
PRKD2-208ENST00000597390 HIRIP3Q9BW71 556 aaPredicted RBP19.19■□□□□ 0.66
PRKD2-208ENST00000597390 SBNO2Q9Y2G9 1366 aa19.19■□□□□ 0.66
PRKD2-208ENST00000597390 TULP4Q9NRJ4 1543 aa19.19■□□□□ 0.66
PRKD2-208ENST00000597390 SPATA31A3Q5VYP0 1347 aa19.18■□□□□ 0.66
PRKD2-208ENST00000597390 WASLO00401 505 aaPredicted RBP19.18■□□□□ 0.66
PRKD2-208ENST00000597390 NGLY1Q96IV0 654 aa19.18■□□□□ 0.66
PRKD2-208ENST00000597390 RXRBP28702 533 aa19.17■□□□□ 0.66
PRKD2-208ENST00000597390 PSME1Q06323 249 aa19.17■□□□□ 0.66
PRKD2-208ENST00000597390 CDK12Q9NYV4 1490 aaPredicted RBP19.15■□□□□ 0.66
PRKD2-208ENST00000597390 TNS3Q68CZ2 1445 aa19.15■□□□□ 0.66
PRKD2-208ENST00000597390 SBNO1A3KN83 1393 aa19.15■□□□□ 0.66
PRKD2-208ENST00000597390 ITSN1Q15811 1721 aa19.14■□□□□ 0.65
PRKD2-208ENST00000597390 PRR36Q9H6K5 1346 aa19.14■□□□□ 0.65
PRKD2-208ENST00000597390 PMFBP1Q8TBY8 1022 aa19.14■□□□□ 0.65
PRKD2-208ENST00000597390 QTRT2Q9H974 415 aaKnown RBP19.14■□□□□ 0.65
PRKD2-208ENST00000597390 FNBP4Q8N3X1 1017 aaPredicted RBP19.13■□□□□ 0.65
PRKD2-208ENST00000597390 USP21Q9UK80 565 aa19.12■□□□□ 0.65
PRKD2-208ENST00000597390 TRPM3Q9HCF6 1732 aaPredicted RBP19.12■□□□□ 0.65
PRKD2-208ENST00000597390 RBM6P78332 1123 aaKnown RBP19.11■□□□□ 0.65
PRKD2-208ENST00000597390 ATP7BP35670 1465 aa19.1■□□□□ 0.65
PRKD2-208ENST00000597390 ARHGEF10O15013 1369 aa19.1■□□□□ 0.65
PRKD2-208ENST00000597390 C11orf95C9JLR9 678 aaPredicted RBP19.09■□□□□ 0.65
PRKD2-208ENST00000597390 ABCA3Q99758 1704 aa19.09■□□□□ 0.65
PRKD2-208ENST00000597390 SLC24A1O60721 1099 aa19.08■□□□□ 0.65
PRKD2-208ENST00000597390 TRPC5Q9UL62 973 aaPredicted RBP19.08■□□□□ 0.65
PRKD2-208ENST00000597390 ALS2Q96Q42 1657 aa19.08■□□□□ 0.64
PRKD2-208ENST00000597390 SRCAPQ6ZRS2 3230 aa19.07■□□□□ 0.64
PRKD2-208ENST00000597390 NUDT16Q96DE0 195 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms