RNA–Protein interactions for RNA: ENST00000594513.1

ARHGEF1-209, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 325 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-209ENST00000594513 ARHGEF28Q8N1W1 1705 aaKnown RBP16.41■□□□□ 0.22
ARHGEF1-209ENST00000594513 MSH6P52701 1360 aa16.4■□□□□ 0.22
ARHGEF1-209ENST00000594513 CENPJQ9HC77 1338 aaPredicted RBP16.4■□□□□ 0.22
ARHGEF1-209ENST00000594513 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.39■□□□□ 0.21
ARHGEF1-209ENST00000594513 NUTM2FA1L443 756 aa16.39■□□□□ 0.21
ARHGEF1-209ENST00000594513 UBAP1LF5GYI3 381 aa16.39■□□□□ 0.21
ARHGEF1-209ENST00000594513 C19orf44Q9H6X5 657 aa16.39■□□□□ 0.21
ARHGEF1-209ENST00000594513 ADGRL3Q9HAR2 1447 aa16.38■□□□□ 0.21
ARHGEF1-209ENST00000594513 ATF3P18847 181 aa16.38■□□□□ 0.21
ARHGEF1-209ENST00000594513 NALCNQ8IZF0 1738 aa16.38■□□□□ 0.21
ARHGEF1-209ENST00000594513 NCOA3Q9Y6Q9 1424 aa16.37■□□□□ 0.21
ARHGEF1-209ENST00000594513 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
ARHGEF1-209ENST00000594513 EIF3AQ14152 1382 aaKnown RBP16.37■□□□□ 0.21
ARHGEF1-209ENST00000594513 USP47Q96K76 1375 aa16.37■□□□□ 0.21
ARHGEF1-209ENST00000594513 ST20-MTHFSA0A0A6YYL1 179 aa16.36■□□□□ 0.21
ARHGEF1-209ENST00000594513 PIP4K2BP78356 416 aa16.36■□□□□ 0.21
ARHGEF1-209ENST00000594513 TOM1O60784 492 aa16.34■□□□□ 0.21
ARHGEF1-209ENST00000594513 CADPS2Q86UW7 1296 aa16.34■□□□□ 0.21
ARHGEF1-209ENST00000594513 IQSEC2Q5JU85 1478 aa16.34■□□□□ 0.21
ARHGEF1-209ENST00000594513 HSPA5P11021 654 aaKnown RBP16.33■□□□□ 0.2
ARHGEF1-209ENST00000594513 ZEB1P37275 1124 aaPredicted RBP16.33■□□□□ 0.2
ARHGEF1-209ENST00000594513 QRICH2Q9H0J4 1663 aa16.33■□□□□ 0.2
ARHGEF1-209ENST00000594513 SLAIN2Q9P270 581 aa16.32■□□□□ 0.2
ARHGEF1-209ENST00000594513 WASLO00401 505 aaPredicted RBP16.31■□□□□ 0.2
ARHGEF1-209ENST00000594513 EIF4G2P78344 907 aaKnown RBP eCLIP16.31■□□□□ 0.2
ARHGEF1-209ENST00000594513 CDK19Q9BWU1 502 aa16.31■□□□□ 0.2
ARHGEF1-209ENST00000594513 CABP2Q9NPB3 220 aa16.3■□□□□ 0.2
ARHGEF1-209ENST00000594513 DCCP43146 1447 aa16.29■□□□□ 0.2
ARHGEF1-209ENST00000594513 MST1RQ04912 1400 aa16.29■□□□□ 0.2
ARHGEF1-209ENST00000594513 SRPK2P78362 688 aaKnown RBP16.29■□□□□ 0.2
ARHGEF1-209ENST00000594513 CDC42BPGQ6DT37 1551 aa16.29■□□□□ 0.2
ARHGEF1-209ENST00000594513 TESK2Q96S53 571 aa16.28■□□□□ 0.2
ARHGEF1-209ENST00000594513 ORAI2Q96SN7 254 aa16.28■□□□□ 0.2
ARHGEF1-209ENST00000594513 EVC2Q86UK5 1308 aa16.27■□□□□ 0.2
ARHGEF1-209ENST00000594513 ADGRB2O60241 1585 aa16.27■□□□□ 0.2
ARHGEF1-209ENST00000594513 ESCO1Q5FWF5 840 aa16.27■□□□□ 0.2
ARHGEF1-209ENST00000594513 C1orf167Q5SNV9 1468 aa16.27■□□□□ 0.19
ARHGEF1-209ENST00000594513 PRR36Q9H6K5 1346 aa16.26■□□□□ 0.19
ARHGEF1-209ENST00000594513 TULP4Q9NRJ4 1543 aa16.26■□□□□ 0.19
ARHGEF1-209ENST00000594513 FMN2Q9NZ56 1722 aa16.26■□□□□ 0.19
ARHGEF1-209ENST00000594513 DDX17Q92841 729 aaKnown RBP16.25■□□□□ 0.19
ARHGEF1-209ENST00000594513 NUDT16Q96DE0 195 aaKnown RBP16.25■□□□□ 0.19
ARHGEF1-209ENST00000594513 BRINP3Q76B58 766 aa16.24■□□□□ 0.19
ARHGEF1-209ENST00000594513 PMFBP1Q8TBY8 1022 aa16.24■□□□□ 0.19
ARHGEF1-209ENST00000594513 FBXO41Q8TF61 875 aa16.24■□□□□ 0.19
ARHGEF1-209ENST00000594513 POLR3GLQ9BT43 218 aa16.24■□□□□ 0.19
ARHGEF1-209ENST00000594513 TMF1P82094 1093 aa16.23■□□□□ 0.19
ARHGEF1-209ENST00000594513 DISP3Q9P2K9 1392 aa16.23■□□□□ 0.19
ARHGEF1-209ENST00000594513 SBNO2Q9Y2G9 1366 aa16.23■□□□□ 0.19
ARHGEF1-209ENST00000594513 RGPD8O14715 1765 aaPredicted RBP16.23■□□□□ 0.19
ARHGEF1-209ENST00000594513 USP32Q8NFA0 1604 aa16.22■□□□□ 0.19
ARHGEF1-209ENST00000594513 ROBO1Q9Y6N7 1651 aa16.21■□□□□ 0.19
ARHGEF1-209ENST00000594513 PHF8Q9UPP1 1060 aa16.21■□□□□ 0.19
ARHGEF1-209ENST00000594513 XPCQ01831 940 aaPredicted RBP16.2■□□□□ 0.18
ARHGEF1-209ENST00000594513 ATP7BP35670 1465 aa16.2■□□□□ 0.18
ARHGEF1-209ENST00000594513 ANKARQ7Z5J8 1434 aa16.19■□□□□ 0.18
ARHGEF1-209ENST00000594513 FOXO3O43524 673 aa16.19■□□□□ 0.18
ARHGEF1-209ENST00000594513 TMC1Q8TDI8 760 aa16.19■□□□□ 0.18
ARHGEF1-209ENST00000594513 CABP1Q9NZU7 370 aa16.19■□□□□ 0.18
ARHGEF1-209ENST00000594513 CCDC61Q9Y6R9 512 aa16.19■□□□□ 0.18
ARHGEF1-209ENST00000594513 C11orf95C9JLR9 678 aaPredicted RBP16.18■□□□□ 0.18
ARHGEF1-209ENST00000594513 HSPA1LP34931 641 aa16.17■□□□□ 0.18
ARHGEF1-209ENST00000594513 NGDNQ8NEJ9 315 aaKnown RBP16.17■□□□□ 0.18
ARHGEF1-209ENST00000594513 PPIP5K1Q6PFW1 1433 aa16.17■□□□□ 0.18
ARHGEF1-209ENST00000594513 SLC24A1O60721 1099 aa16.16■□□□□ 0.18
ARHGEF1-209ENST00000594513 ATAD2Q6PL18 1390 aa16.15■□□□□ 0.18
ARHGEF1-209ENST00000594513 ILDR1Q86SU0 546 aaPredicted RBP16.15■□□□□ 0.18
ARHGEF1-209ENST00000594513 SLC12A5Q9H2X9 1139 aa16.15■□□□□ 0.18
ARHGEF1-209ENST00000594513 ACEP12821 1306 aa16.15■□□□□ 0.18
ARHGEF1-209ENST00000594513 PSME1Q06323 249 aa16.14■□□□□ 0.17
ARHGEF1-209ENST00000594513 PLEKHG3A1L390 1219 aa16.13■□□□□ 0.17
ARHGEF1-209ENST00000594513 CDCA8Q53HL2 280 aa16.13■□□□□ 0.17
ARHGEF1-209ENST00000594513 KRT28Q7Z3Y7 464 aa16.13■□□□□ 0.17
ARHGEF1-209ENST00000594513 TOPAZ1Q8N9V7 1692 aa16.13■□□□□ 0.17
ARHGEF1-209ENST00000594513 NPHP3Q7Z494 1330 aa16.13■□□□□ 0.17
ARHGEF1-209ENST00000594513 ITSN1Q15811 1721 aa16.12■□□□□ 0.17
ARHGEF1-209ENST00000594513 PHLPP1O60346 1717 aa16.11■□□□□ 0.17
ARHGEF1-209ENST00000594513 PLEKHG5O94827 1062 aa16.11■□□□□ 0.17
ARHGEF1-209ENST00000594513 PUS7Q96PZ0 661 aaKnown RBP16.11■□□□□ 0.17
ARHGEF1-209ENST00000594513 KIF7Q2M1P5 1343 aa16.11■□□□□ 0.17
ARHGEF1-209ENST00000594513 KIF1AQ12756 1690 aa16.11■□□□□ 0.17
ARHGEF1-209ENST00000594513 PAK3O75914 559 aaPredicted RBP16.1■□□□□ 0.17
ARHGEF1-209ENST00000594513 LMOD2Q6P5Q4 547 aa16.1■□□□□ 0.17
ARHGEF1-209ENST00000594513 NHSL1Q5SYE7 1610 aa16.09■□□□□ 0.17
ARHGEF1-209ENST00000594513 AHDC1Q5TGY3 1603 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF1-209ENST00000594513 SOS2Q07890 1332 aaPredicted RBP16.08■□□□□ 0.16
ARHGEF1-209ENST00000594513 POLR3AO14802 1390 aaPredicted RBP16.08■□□□□ 0.16
ARHGEF1-209ENST00000594513 PXDNQ92626 1479 aa16.08■□□□□ 0.16
ARHGEF1-209ENST00000594513 HDGFL2Q7Z4V5 671 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF1-209ENST00000594513 WASHC2AQ641Q2 1341 aa16.07■□□□□ 0.16
ARHGEF1-209ENST00000594513 COL16A1Q07092 1604 aaPredicted RBP16.06■□□□□ 0.16
ARHGEF1-209ENST00000594513 KTN1Q86UP2 1357 aaKnown RBP16.06■□□□□ 0.16
ARHGEF1-209ENST00000594513 CCDC7Q96M83 1385 aa16.06■□□□□ 0.16
ARHGEF1-209ENST00000594513 NUTM2GQ5VZR2 741 aa16.06■□□□□ 0.16
ARHGEF1-209ENST00000594513 CD163L1Q9NR16 1453 aa16.05■□□□□ 0.16
ARHGEF1-209ENST00000594513 A0A1W2PP64 1363 aa16.05■□□□□ 0.16
ARHGEF1-209ENST00000594513 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.05■□□□□ 0.16
ARHGEF1-209ENST00000594513 LRRC59Q96AG4 307 aaKnown RBP16.05■□□□□ 0.16
ARHGEF1-209ENST00000594513 TERF2IPQ9NYB0 399 aa16.05■□□□□ 0.16
ARHGEF1-209ENST00000594513 ZNF692Q9BU19 519 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms