RNA–Protein interactions for RNA: ENST00000594104.1

VRK3-208, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,197 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-208ENST00000594104 VGFO15240 615 aaPredicted RBP15.41■□□□□ 0.06
VRK3-208ENST00000594104 ADAMTS8Q9UP79 889 aa15.41■□□□□ 0.06
VRK3-208ENST00000594104 ZFYVE9O95405 1425 aa15.41■□□□□ 0.06
VRK3-208ENST00000594104 ANP32EQ9BTT0 268 aa15.41■□□□□ 0.06
VRK3-208ENST00000594104 SPOCK2Q92563 424 aa15.4■□□□□ 0.06
VRK3-208ENST00000594104 SLC52A1Q9NWF4 448 aa15.4■□□□□ 0.06
VRK3-208ENST00000594104 ZC3H13Q5T200 1668 aaKnown RBP15.4■□□□□ 0.06
VRK3-208ENST00000594104 PPLO60437 1756 aa15.4■□□□□ 0.06
VRK3-208ENST00000594104 DIP2CQ9Y2E4 1556 aa15.39■□□□□ 0.05
VRK3-208ENST00000594104 CAMSAP1Q5T5Y3 1602 aa15.39■□□□□ 0.05
VRK3-208ENST00000594104 PIK3C2BO00750 1634 aa15.39■□□□□ 0.05
VRK3-208ENST00000594104 ADGRB1O14514 1584 aa15.38■□□□□ 0.05
VRK3-208ENST00000594104 ZNF521Q96K83 1311 aa15.37■□□□□ 0.05
VRK3-208ENST00000594104 RAPGEF3O95398 923 aa15.36■□□□□ 0.05
VRK3-208ENST00000594104 CARD14Q9BXL6 1004 aa15.35■□□□□ 0.05
VRK3-208ENST00000594104 RICTORQ6R327 1708 aa15.35■□□□□ 0.05
VRK3-208ENST00000594104 CDCA7LQ96GN5 454 aa15.35■□□□□ 0.05
VRK3-208ENST00000594104 POLR3AO14802 1390 aaPredicted RBP15.34■□□□□ 0.05
VRK3-208ENST00000594104 GOLGA2Q08379 1002 aa15.34■□□□□ 0.05
VRK3-208ENST00000594104 DMRT2Q9Y5R5 561 aa15.34■□□□□ 0.05
VRK3-208ENST00000594104 SALL2Q9Y467 1007 aaPredicted RBP15.33■□□□□ 0.04
VRK3-208ENST00000594104 USP32Q8NFA0 1604 aa15.32■□□□□ 0.04
VRK3-208ENST00000594104 NEXMIFQ5QGS0 1516 aa15.32■□□□□ 0.04
VRK3-208ENST00000594104 EVC2Q86UK5 1308 aa15.31■□□□□ 0.04
VRK3-208ENST00000594104 NINLQ9Y2I6 1382 aa15.31■□□□□ 0.04
VRK3-208ENST00000594104 TRMT2AQ8IZ69 625 aaKnown RBP15.31■□□□□ 0.04
VRK3-208ENST00000594104 NSD2O96028 1365 aa15.31■□□□□ 0.04
VRK3-208ENST00000594104 EXOC6Q8TAG9 804 aa15.31■□□□□ 0.04
VRK3-208ENST00000594104 TRAK1Q9UPV9 953 aa15.31■□□□□ 0.04
VRK3-208ENST00000594104 DUSP27Q5VZP5 1158 aa15.3■□□□□ 0.04
VRK3-208ENST00000594104 SAMD1Q6SPF0 538 aaPredicted RBP15.3■□□□□ 0.04
VRK3-208ENST00000594104 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.3■□□□□ 0.04
VRK3-208ENST00000594104 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
VRK3-208ENST00000594104 PLEKHH1Q9ULM0 1364 aa15.3■□□□□ 0.04
VRK3-208ENST00000594104 TCERG1O14776 1098 aaKnown RBP15.29■□□□□ 0.04
VRK3-208ENST00000594104 SLFN5Q08AF3 891 aa15.29■□□□□ 0.04
VRK3-208ENST00000594104 QRICH2Q9H0J4 1663 aa15.29■□□□□ 0.04
VRK3-208ENST00000594104 SENP3-EIF4A1A0A087X0R7 540 aa15.29■□□□□ 0.04
VRK3-208ENST00000594104 IDI1Q13907 227 aa15.29■□□□□ 0.04
VRK3-208ENST00000594104 REREQ9P2R6 1566 aa15.29■□□□□ 0.04
VRK3-208ENST00000594104 MS4A1P11836 297 aa15.28■□□□□ 0.04
VRK3-208ENST00000594104 SIGLEC1Q9BZZ2 1709 aa15.28■□□□□ 0.04
VRK3-208ENST00000594104 MKRN4PQ13434 485 aaPredicted RBP15.28■□□□□ 0.04
VRK3-208ENST00000594104 CGNL1Q0VF96 1302 aa15.28■□□□□ 0.04
VRK3-208ENST00000594104 MORC1Q86VD1 984 aa15.27■□□□□ 0.04
VRK3-208ENST00000594104 NSD3Q9BZ95 1437 aa15.27■□□□□ 0.03
VRK3-208ENST00000594104 YEATS2Q9ULM3 1422 aa15.27■□□□□ 0.03
VRK3-208ENST00000594104 AGLP35573 1532 aa15.27■□□□□ 0.03
VRK3-208ENST00000594104 E9PSI1 815 aa15.26■□□□□ 0.03
VRK3-208ENST00000594104 BRPF1P55201 1214 aaPredicted RBP15.26■□□□□ 0.03
VRK3-208ENST00000594104 TMEM132EQ6IEE7 984 aa15.26■□□□□ 0.03
VRK3-208ENST00000594104 ANKRD36BQ8N2N9 1353 aa15.26■□□□□ 0.03
VRK3-208ENST00000594104 SLC12A5Q9H2X9 1139 aa15.24■□□□□ 0.03
VRK3-208ENST00000594104 CFAP53Q96M91 514 aa15.24■□□□□ 0.03
VRK3-208ENST00000594104 MSH5O43196 834 aa15.23■□□□□ 0.03
VRK3-208ENST00000594104 TMEM131LA2VDJ0 1609 aa15.23■□□□□ 0.03
VRK3-208ENST00000594104 APAF1O14727 1248 aa15.22■□□□□ 0.03
VRK3-208ENST00000594104 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
VRK3-208ENST00000594104 PREX1Q8TCU6 1659 aa15.22■□□□□ 0.03
VRK3-208ENST00000594104 ARHGEF28Q8N1W1 1705 aaKnown RBP15.22■□□□□ 0.03
VRK3-208ENST00000594104 NKTRP30414 1462 aaKnown RBP15.22■□□□□ 0.03
VRK3-208ENST00000594104 CFAP65Q6ZU64 1925 aaKnown RBP15.21■□□□□ 0.03
VRK3-208ENST00000594104 ATAD2Q6PL18 1390 aa15.21■□□□□ 0.03
VRK3-208ENST00000594104 FAM69CQ0P6D2 419 aa15.21■□□□□ 0.02
VRK3-208ENST00000594104 RUNDC1Q96C34 613 aa15.21■□□□□ 0.02
VRK3-208ENST00000594104 CRBNQ96SW2 442 aa15.21■□□□□ 0.02
VRK3-208ENST00000594104 TULP4Q9NRJ4 1543 aa15.2■□□□□ 0.02
VRK3-208ENST00000594104 DIP2BQ9P265 1576 aa15.2■□□□□ 0.02
VRK3-208ENST00000594104 CCDC27Q2M243 656 aa15.19■□□□□ 0.02
VRK3-208ENST00000594104 PLIN1O60240 522 aa15.18■□□□□ 0.02
VRK3-208ENST00000594104 ANP32AP39687 249 aaKnown RBP15.18■□□□□ 0.02
VRK3-208ENST00000594104 WDR63Q8IWG1 891 aa15.18■□□□□ 0.02
VRK3-208ENST00000594104 CCDC146Q8IYE0 955 aa15.18■□□□□ 0.02
VRK3-208ENST00000594104 MED14O60244 1454 aa15.17■□□□□ 0.02
VRK3-208ENST00000594104 CENPQQ7L2Z9 268 aaPredicted RBP15.17■□□□□ 0.02
VRK3-208ENST00000594104 TERF2IPQ9NYB0 399 aa15.17■□□□□ 0.02
VRK3-208ENST00000594104 ABCC11Q96J66 1382 aa15.17■□□□□ 0.02
VRK3-208ENST00000594104 YTHDC2Q9H6S0 1430 aaKnown RBP15.16■□□□□ 0.02
VRK3-208ENST00000594104 PTPRMP28827 1452 aa15.16■□□□□ 0.02
VRK3-208ENST00000594104 RIMBP3CA6NJZ7 1639 aa15.16■□□□□ 0.02
VRK3-208ENST00000594104 RIMBP3BA6NNM3 1639 aa15.16■□□□□ 0.02
VRK3-208ENST00000594104 RIMBP3Q9UFD9 1639 aa15.16■□□□□ 0.02
VRK3-208ENST00000594104 WWC1Q8IX03 1113 aa15.16■□□□□ 0.02
VRK3-208ENST00000594104 AAMPQ13685 434 aa15.15■□□□□ 0.02
VRK3-208ENST00000594104 MTHFSP49914 203 aa15.15■□□□□ 0.02
VRK3-208ENST00000594104 PDE3AQ14432 1141 aa15.15■□□□□ 0.02
VRK3-208ENST00000594104 SHPRHQ149N8 1683 aa15.14■□□□□ 0.01
VRK3-208ENST00000594104 KDM2BQ8NHM5 1336 aa15.14■□□□□ 0.01
VRK3-208ENST00000594104 DLC1Q96QB1 1528 aa15.14■□□□□ 0.01
VRK3-208ENST00000594104 CLTCQ00610 1675 aaKnown RBP15.14■□□□□ 0.01
VRK3-208ENST00000594104 SPATA31D1Q6ZQQ2 1576 aa15.13■□□□□ 0.01
VRK3-208ENST00000594104 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
VRK3-208ENST00000594104 IPO9Q96P70 1041 aaKnown RBP15.13■□□□□ 0.01
VRK3-208ENST00000594104 POGKQ9P215 609 aa15.13■□□□□ 0.01
VRK3-208ENST00000594104 ALKQ9UM73 1620 aa15.13■□□□□ 0.01
VRK3-208ENST00000594104 IQSEC2Q5JU85 1478 aa15.13■□□□□ 0.01
VRK3-208ENST00000594104 NUTM2DQ5VT03 806 aaPredicted RBP15.12■□□□□ 0.01
VRK3-208ENST00000594104 CABP2Q9NPB3 220 aa15.12■□□□□ 0.01
VRK3-208ENST00000594104 BACH2Q9BYV9 841 aa15.12■□□□□ 0.01
VRK3-208ENST00000594104 PDE4AP27815 886 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms