RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 CCDC85AQ96PX6 553 aaPredicted RBP22.22■■□□□ 1.15
SYNM-204ENST00000594047 AFAP1Q8N556 730 aa22.22■■□□□ 1.15
SYNM-204ENST00000594047 BICD2Q8TD16 824 aa22.21■■□□□ 1.15
SYNM-204ENST00000594047 ZKSCAN1P17029 563 aaPredicted RBP22.21■■□□□ 1.15
SYNM-204ENST00000594047 SLC26A8Q96RN1 970 aa22.21■■□□□ 1.15
SYNM-204ENST00000594047 CNNM1Q9NRU3 951 aa22.21■■□□□ 1.15
SYNM-204ENST00000594047 GPRASP1Q5JY77 1395 aa22.21■■□□□ 1.15
SYNM-204ENST00000594047 ADAMTS2O95450 1211 aa22.2■■□□□ 1.14
SYNM-204ENST00000594047 SIL1Q9H173 461 aa22.2■■□□□ 1.14
SYNM-204ENST00000594047 RUFY2Q8WXA3 655 aa22.2■■□□□ 1.14
SYNM-204ENST00000594047 CT47A1Q5JQC4 288 aaPredicted RBP22.19■■□□□ 1.14
SYNM-204ENST00000594047 USP47Q96K76 1375 aa22.18■■□□□ 1.14
SYNM-204ENST00000594047 TIMELESSQ9UNS1 1208 aa22.18■■□□□ 1.14
SYNM-204ENST00000594047 LNPKQ9C0E8 428 aa22.18■■□□□ 1.14
SYNM-204ENST00000594047 CABP4P57796 275 aa22.18■■□□□ 1.14
SYNM-204ENST00000594047 RAD54L2Q9Y4B4 1467 aa22.18■■□□□ 1.14
SYNM-204ENST00000594047 MAP4K4O95819 1239 aaPredicted RBP22.17■■□□□ 1.14
SYNM-204ENST00000594047 PTMSP20962 102 aa22.17■■□□□ 1.14
SYNM-204ENST00000594047 RALYLQ86SE5 291 aaKnown RBP22.17■■□□□ 1.14
SYNM-204ENST00000594047 DDX49Q9Y6V7 483 aaKnown RBP22.17■■□□□ 1.14
SYNM-204ENST00000594047 C1orf115Q9H7X2 142 aa22.17■■□□□ 1.14
SYNM-204ENST00000594047 AQRO60306 1485 aaKnown RBP eCLIP22.17■■□□□ 1.14
SYNM-204ENST00000594047 E9PSI1 815 aa22.17■■□□□ 1.14
SYNM-204ENST00000594047 PDE3BQ13370 1112 aa22.17■■□□□ 1.14
SYNM-204ENST00000594047 TPM1P09493 284 aa22.16■■□□□ 1.14
SYNM-204ENST00000594047 CCDC47Q96A33 483 aaKnown RBP22.16■■□□□ 1.14
SYNM-204ENST00000594047 DHX57Q6P158 1386 aaKnown RBP22.15■■□□□ 1.14
SYNM-204ENST00000594047 ODF2Q5BJF6 829 aa22.15■■□□□ 1.14
SYNM-204ENST00000594047 PRAM1Q96QH2 718 aa22.15■■□□□ 1.14
SYNM-204ENST00000594047 UBTFL1P0CB47 393 aaPredicted RBP22.15■■□□□ 1.14
SYNM-204ENST00000594047 ZSCAN29Q8IWY8 852 aaPredicted RBP22.15■■□□□ 1.14
SYNM-204ENST00000594047 ZC3H6P61129 1189 aaKnown RBP22.14■■□□□ 1.14
SYNM-204ENST00000594047 TTLL5Q6EMB2 1281 aa22.14■■□□□ 1.14
SYNM-204ENST00000594047 PIBF1Q8WXW3 757 aa22.14■■□□□ 1.13
SYNM-204ENST00000594047 PHF14O94880 888 aa22.13■■□□□ 1.13
SYNM-204ENST00000594047 EPS15P42566 896 aa22.13■■□□□ 1.13
SYNM-204ENST00000594047 SKIDA1Q1XH10 827 aa22.12■■□□□ 1.13
SYNM-204ENST00000594047 FSD1Q9BTV5 496 aa22.12■■□□□ 1.13
SYNM-204ENST00000594047 TTC39AQ5SRH9 613 aa22.12■■□□□ 1.13
SYNM-204ENST00000594047 DZIP1LQ8IYY4 767 aaKnown RBP22.12■■□□□ 1.13
SYNM-204ENST00000594047 PANK1Q8TE04 598 aa22.11■■□□□ 1.13
SYNM-204ENST00000594047 WWC3Q9ULE0 1092 aa22.11■■□□□ 1.13
SYNM-204ENST00000594047 TATP17735 454 aaPredicted RBP22.11■■□□□ 1.13
SYNM-204ENST00000594047 RUSC2Q8N2Y8 1516 aa22.1■■□□□ 1.13
SYNM-204ENST00000594047 ARHGAP5Q13017 1502 aa22.1■■□□□ 1.13
SYNM-204ENST00000594047 GRM1Q13255 1194 aa22.09■■□□□ 1.13
SYNM-204ENST00000594047 CFAP70Q5T0N1 1121 aa22.08■■□□□ 1.13
SYNM-204ENST00000594047 RNF20Q5VTR2 975 aa22.08■■□□□ 1.13
SYNM-204ENST00000594047 RAPGEF3O95398 923 aa22.08■■□□□ 1.13
SYNM-204ENST00000594047 SAFBQ15424 915 aaKnown RBP eCLIP22.08■■□□□ 1.12
SYNM-204ENST00000594047 TNNT3P45378 269 aaPredicted RBP22.07■■□□□ 1.12
SYNM-204ENST00000594047 CEBPZQ03701 1054 aaKnown RBP22.07■■□□□ 1.12
SYNM-204ENST00000594047 WWC2Q6AWC2 1192 aa22.07■■□□□ 1.12
SYNM-204ENST00000594047 PRDM11Q9NQV5 511 aa22.07■■□□□ 1.12
SYNM-204ENST00000594047 ZHX3Q9H4I2 956 aa22.06■■□□□ 1.12
SYNM-204ENST00000594047 RUNDC1Q96C34 613 aa22.06■■□□□ 1.12
SYNM-204ENST00000594047 TBC1D2BQ9UPU7 963 aa22.06■■□□□ 1.12
SYNM-204ENST00000594047 API5Q9BZZ5 524 aaKnown RBP22.06■■□□□ 1.12
SYNM-204ENST00000594047 SMC3Q9UQE7 1217 aa22.06■■□□□ 1.12
SYNM-204ENST00000594047 PLEKHO1Q53GL0 409 aaPredicted RBP22.06■■□□□ 1.12
SYNM-204ENST00000594047 SURF6O75683 361 aaKnown RBP22.05■■□□□ 1.12
SYNM-204ENST00000594047 DDX19BQ9UMR2 479 aa22.05■■□□□ 1.12
SYNM-204ENST00000594047 RRP1P56182 461 aaKnown RBP22.05■■□□□ 1.12
SYNM-204ENST00000594047 VSIG10Q8N0Z9 540 aa22.05■■□□□ 1.12
SYNM-204ENST00000594047 ECM2O94769 699 aaPredicted RBP22.05■■□□□ 1.12
SYNM-204ENST00000594047 MTHFSP49914 203 aa22.05■■□□□ 1.12
SYNM-204ENST00000594047 PHLDB1Q86UU1 1377 aa22.04■■□□□ 1.12
SYNM-204ENST00000594047 PDILTQ8N807 584 aa22.04■■□□□ 1.12
SYNM-204ENST00000594047 ERC2O15083 957 aa22.04■■□□□ 1.12
SYNM-204ENST00000594047 GNAI1P63096 354 aa22.03■■□□□ 1.12
SYNM-204ENST00000594047 ANKRD20A12PQ8NF67 263 aa22.03■■□□□ 1.12
SYNM-204ENST00000594047 HSP90AB2PQ58FF8 381 aa22.03■■□□□ 1.12
SYNM-204ENST00000594047 RRS1Q15050 365 aaKnown RBP22.03■■□□□ 1.12
SYNM-204ENST00000594047 IPO7O95373 1038 aaKnown RBP22.03■■□□□ 1.12
SYNM-204ENST00000594047 HOMER1Q86YM7 354 aa22.02■■□□□ 1.12
SYNM-204ENST00000594047 STK3Q13188 491 aa22.02■■□□□ 1.12
SYNM-204ENST00000594047 TTLL12Q14166 644 aaPredicted RBP22.02■■□□□ 1.12
SYNM-204ENST00000594047 PRKAR2BP31323 418 aa22.02■■□□□ 1.12
SYNM-204ENST00000594047 IPO9Q96P70 1041 aaKnown RBP22.02■■□□□ 1.12
SYNM-204ENST00000594047 KRT18P05783 430 aaKnown RBP22.02■■□□□ 1.11
SYNM-204ENST00000594047 CENPQQ7L2Z9 268 aaPredicted RBP22.02■■□□□ 1.11
SYNM-204ENST00000594047 BRPF1P55201 1214 aaPredicted RBP22.01■■□□□ 1.11
SYNM-204ENST00000594047 CDK19Q9BWU1 502 aa22.01■■□□□ 1.11
SYNM-204ENST00000594047 BRMS1Q9HCU9 246 aa22.01■■□□□ 1.11
SYNM-204ENST00000594047 GAPVD1Q14C86 1478 aa22.01■■□□□ 1.11
SYNM-204ENST00000594047 MPHOSPH10O00566 681 aaKnown RBP22.01■■□□□ 1.11
SYNM-204ENST00000594047 REC8O95072 547 aa22.01■■□□□ 1.11
SYNM-204ENST00000594047 SMG6Q86US8 1419 aaKnown RBP22■■□□□ 1.11
SYNM-204ENST00000594047 SULT6B1Q6IMI4 303 aa22■■□□□ 1.11
SYNM-204ENST00000594047 CDK5RAP3Q96JB5 506 aa22■■□□□ 1.11
SYNM-204ENST00000594047 WASHC2AQ641Q2 1341 aa22■■□□□ 1.11
SYNM-204ENST00000594047 ATP6V1DQ9Y5K8 247 aa22■■□□□ 1.11
SYNM-204ENST00000594047 FKBP4Q02790 459 aaKnown RBP eCLIP21.99■■□□□ 1.11
SYNM-204ENST00000594047 ZNF530Q6P9A1 599 aaPredicted RBP21.99■■□□□ 1.11
SYNM-204ENST00000594047 NUP133Q8WUM0 1156 aa21.99■■□□□ 1.11
SYNM-204ENST00000594047 CABP1Q9NZU7 370 aa21.99■■□□□ 1.11
SYNM-204ENST00000594047 MPHOSPH8Q99549 860 aa21.99■■□□□ 1.11
SYNM-204ENST00000594047 MIA2Q96PC5 1412 aa21.98■■□□□ 1.11
SYNM-204ENST00000594047 PTCD1O75127 700 aaKnown RBP21.97■■□□□ 1.11
SYNM-204ENST00000594047 MATR3P43243 847 aaKnown RBP eCLIP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms