RNA–Protein interactions for RNA: ENST00000593708.1

USF2-204, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-204ENST00000593708 UPF1Q92900 1129 aaKnown RBP eCLIP32.29■■■□□ 2.76
USF2-204ENST00000593708 KNDC1Q76NI1 1749 aa32.27■■■□□ 2.76
USF2-204ENST00000593708 COL22A1Q8NFW1 1626 aaPredicted RBP32.26■■■□□ 2.75
USF2-204ENST00000593708 PIK3C2GO75747 1445 aa32.26■■■□□ 2.75
USF2-204ENST00000593708 ANKRD30BQ9BXX2 1392 aa32.25■■■□□ 2.75
USF2-204ENST00000593708 ADAMTS2O95450 1211 aa32.25■■■□□ 2.75
USF2-204ENST00000593708 RGS12O14924 1447 aa32.25■■■□□ 2.75
USF2-204ENST00000593708 STK26Q9P289 416 aa32.23■■■□□ 2.75
USF2-204ENST00000593708 PXDNQ92626 1479 aa32.23■■■□□ 2.75
USF2-204ENST00000593708 LRPPRCP42704 1394 aaKnown RBP32.22■■■□□ 2.75
USF2-204ENST00000593708 PLEKHH1Q9ULM0 1364 aa32.21■■■□□ 2.75
USF2-204ENST00000593708 WAPLQ7Z5K2 1190 aa32.21■■■□□ 2.75
USF2-204ENST00000593708 TMEM132EQ6IEE7 984 aa32.2■■■□□ 2.75
USF2-204ENST00000593708 QTRT2Q9H974 415 aaKnown RBP32.2■■■□□ 2.75
USF2-204ENST00000593708 ESCO1Q5FWF5 840 aa32.18■■■□□ 2.74
USF2-204ENST00000593708 NGLY1Q96IV0 654 aa32.18■■■□□ 2.74
USF2-204ENST00000593708 ABCC11Q96J66 1382 aa32.18■■■□□ 2.74
USF2-204ENST00000593708 FMN2Q9NZ56 1722 aa32.17■■■□□ 2.74
USF2-204ENST00000593708 MYOM2P54296 1465 aa32.17■■■□□ 2.74
USF2-204ENST00000593708 RBM6P78332 1123 aaKnown RBP32.16■■■□□ 2.74
USF2-204ENST00000593708 NPHP3Q7Z494 1330 aa32.15■■■□□ 2.74
USF2-204ENST00000593708 YTHDC2Q9H6S0 1430 aaKnown RBP32.15■■■□□ 2.74
USF2-204ENST00000593708 EP400Q96L91 3159 aa32.13■■■□□ 2.73
USF2-204ENST00000593708 NUTM2FA1L443 756 aa32.13■■■□□ 2.73
USF2-204ENST00000593708 XPCQ01831 940 aaPredicted RBP32.13■■■□□ 2.73
USF2-204ENST00000593708 MARF1Q9Y4F3 1742 aaKnown RBP32.13■■■□□ 2.73
USF2-204ENST00000593708 NRXN1Q9ULB1 1477 aa32.12■■■□□ 2.73
USF2-204ENST00000593708 FOXO3O43524 673 aa32.11■■■□□ 2.73
USF2-204ENST00000593708 FNBP4Q8N3X1 1017 aaPredicted RBP32.08■■■□□ 2.73
USF2-204ENST00000593708 USP21Q9UK80 565 aa32.08■■■□□ 2.73
USF2-204ENST00000593708 RGPD8O14715 1765 aaPredicted RBP32.08■■■□□ 2.73
USF2-204ENST00000593708 KIF1AQ12756 1690 aa32.06■■■□□ 2.72
USF2-204ENST00000593708 ATRNO75882 1429 aa32.05■■■□□ 2.72
USF2-204ENST00000593708 C14orf93Q9H972 538 aaKnown RBP32.04■■■□□ 2.72
USF2-204ENST00000593708 SRCAPQ6ZRS2 3230 aa32.04■■■□□ 2.72
USF2-204ENST00000593708 RAB3GAP2Q9H2M9 1393 aa32.03■■■□□ 2.72
USF2-204ENST00000593708 BCL9LQ86UU0 1499 aa32.02■■■□□ 2.72
USF2-204ENST00000593708 CFAP70Q5T0N1 1121 aa32.01■■■□□ 2.71
USF2-204ENST00000593708 TRPC5Q9UL62 973 aaPredicted RBP32.01■■■□□ 2.71
USF2-204ENST00000593708 SIRT1Q96EB6 747 aa31.98■■■□□ 2.71
USF2-204ENST00000593708 ACIN1Q9UKV3 1341 aaKnown RBP31.97■■■□□ 2.71
USF2-204ENST00000593708 SPATA31A3Q5VYP0 1347 aa31.96■■■□□ 2.71
USF2-204ENST00000593708 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.95■■■□□ 2.71
USF2-204ENST00000593708 ADGRB1O14514 1584 aa31.94■■■□□ 2.7
USF2-204ENST00000593708 DHX57Q6P158 1386 aaKnown RBP31.94■■■□□ 2.7
USF2-204ENST00000593708 USP32Q8NFA0 1604 aa31.93■■■□□ 2.7
USF2-204ENST00000593708 DLC1Q96QB1 1528 aa31.92■■■□□ 2.7
USF2-204ENST00000593708 PRAM1Q96QH2 718 aa31.92■■■□□ 2.7
USF2-204ENST00000593708 ATAD2Q6PL18 1390 aa31.92■■■□□ 2.7
USF2-204ENST00000593708 SAFB2Q14151 953 aaKnown RBP eCLIP31.91■■■□□ 2.7
USF2-204ENST00000593708 KRT28Q7Z3Y7 464 aa31.9■■■□□ 2.7
USF2-204ENST00000593708 ABCA3Q99758 1704 aa31.89■■■□□ 2.7
USF2-204ENST00000593708 TNS3Q68CZ2 1445 aa31.89■■■□□ 2.7
USF2-204ENST00000593708 SLIT2O94813 1529 aa31.89■■■□□ 2.7
USF2-204ENST00000593708 ADGRB2O60241 1585 aa31.89■■■□□ 2.7
USF2-204ENST00000593708 PHF8Q9UPP1 1060 aa31.88■■■□□ 2.69
USF2-204ENST00000593708 GLI3P10071 1580 aa31.86■■■□□ 2.69
USF2-204ENST00000593708 GJD4Q96KN9 370 aaPredicted RBP31.83■■■□□ 2.69
USF2-204ENST00000593708 RALGAPBQ86X10 1494 aa31.82■■■□□ 2.68
USF2-204ENST00000593708 PLCH1Q4KWH8 1693 aa31.82■■■□□ 2.68
USF2-204ENST00000593708 CABLES1Q8TDN4 633 aa31.81■■■□□ 2.68
USF2-204ENST00000593708 UNC5CLQ8IV45 518 aa31.8■■■□□ 2.68
USF2-204ENST00000593708 ANKARQ7Z5J8 1434 aa31.8■■■□□ 2.68
USF2-204ENST00000593708 TRPM3Q9HCF6 1732 aaPredicted RBP31.79■■■□□ 2.68
USF2-204ENST00000593708 POGKQ9P215 609 aa31.79■■■□□ 2.68
USF2-204ENST00000593708 SBNO1A3KN83 1393 aa31.79■■■□□ 2.68
USF2-204ENST00000593708 BRWD3Q6RI45 1802 aa31.78■■■□□ 2.68
USF2-204ENST00000593708 TRAK1Q9UPV9 953 aa31.77■■■□□ 2.68
USF2-204ENST00000593708 NWD2Q9ULI1 1742 aa31.76■■■□□ 2.67
USF2-204ENST00000593708 PLEKHG5O94827 1062 aa31.76■■■□□ 2.67
USF2-204ENST00000593708 PSME1Q06323 249 aa31.76■■■□□ 2.67
USF2-204ENST00000593708 PMFBP1Q8TBY8 1022 aa31.76■■■□□ 2.67
USF2-204ENST00000593708 HIRIP3Q9BW71 556 aaPredicted RBP31.76■■■□□ 2.67
USF2-204ENST00000593708 KDM2AQ9Y2K7 1162 aa31.75■■■□□ 2.67
USF2-204ENST00000593708 DCAF11Q8TEB1 546 aa31.74■■■□□ 2.67
USF2-204ENST00000593708 ALS2Q96Q42 1657 aa31.73■■■□□ 2.67
USF2-204ENST00000593708 PRR36Q9H6K5 1346 aa31.73■■■□□ 2.67
USF2-204ENST00000593708 ARHGEF10O15013 1369 aa31.72■■■□□ 2.67
USF2-204ENST00000593708 MINK1Q8N4C8 1332 aaPredicted RBP31.72■■■□□ 2.67
USF2-204ENST00000593708 ARHGEF28Q8N1W1 1705 aaKnown RBP31.72■■■□□ 2.67
USF2-204ENST00000593708 TULP4Q9NRJ4 1543 aa31.71■■■□□ 2.67
USF2-204ENST00000593708 LMOD2Q6P5Q4 547 aa31.71■■■□□ 2.67
USF2-204ENST00000593708 HAP1P54257 671 aaPredicted RBP31.7■■■□□ 2.67
USF2-204ENST00000593708 NRAPQ86VF7 1730 aa31.68■■■□□ 2.66
USF2-204ENST00000593708 CRYBG1Q9Y4K1 1723 aa31.66■■■□□ 2.66
USF2-204ENST00000593708 VPS72Q15906 364 aa31.65■■■□□ 2.66
USF2-204ENST00000593708 FAM83GA6ND36 823 aa31.63■■■□□ 2.65
USF2-204ENST00000593708 WASLO00401 505 aaPredicted RBP31.63■■■□□ 2.65
USF2-204ENST00000593708 EIF3AQ14152 1382 aaKnown RBP31.63■■■□□ 2.65
USF2-204ENST00000593708 HRCP23327 699 aa31.62■■■□□ 2.65
USF2-204ENST00000593708 CCDC125Q86Z20 511 aa31.61■■■□□ 2.65
USF2-204ENST00000593708 ITSN1Q15811 1721 aa31.61■■■□□ 2.65
USF2-204ENST00000593708 SEPT12Q8IYM1 358 aa31.6■■■□□ 2.65
USF2-204ENST00000593708 ATP7BP35670 1465 aa31.59■■■□□ 2.65
USF2-204ENST00000593708 GPRASP1Q5JY77 1395 aa31.59■■■□□ 2.65
USF2-204ENST00000593708 STAC3Q96MF2 364 aa31.59■■■□□ 2.65
USF2-204ENST00000593708 COL14A1Q05707 1796 aaKnown RBP31.58■■■□□ 2.65
USF2-204ENST00000593708 BLMP54132 1417 aaPredicted RBP31.58■■■□□ 2.65
USF2-204ENST00000593708 ONECUT3O60422 494 aaPredicted RBP31.55■■■□□ 2.64
USF2-204ENST00000593708 CCDC9Q9Y3X0 531 aaKnown RBP31.55■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms